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The map label for this gene is trbG [H]

Identifier: 159046520

GI number: 159046520

Start: 39853

End: 40548

Strand: Direct

Name: trbG [H]

Synonym: Dshi_3981

Alternate gene names: 159046520

Gene position: 39853-40548 (Clockwise)

Preceding gene: 159046519

Following gene: 159046521

Centisome position: 31.55

GC content: 62.5

Gene sequence:

>696_bases
TTGTTGTTTATAAGATCGCTTATTTTTGTCATTGCCCTGTTGCCCGGCCTCGCCTCTGCCGAAGCGATCCCGCGCGGTGG
TCCAAATGACAGCCGCGTGCGCTTGGCCACCTACCAAGAGGGCCAAGTCTATCGTCTCAATGTCTCGCTCACCCACGTGA
CCACCATCGAGTTCGGCGAGGGCGAAAGCATCCGCTCGATCATCGCGGGCGACACGGAAGGGTTTGAGATCGACGGTGTC
CCGGGCGGTCAGGCCTTCGCGATCAAGCCTGTGGCGCGCGGGGTGCATACCAATGTGACAGTCTATACGAACCGCCGGAG
CTACTACTTCAACGTCGAGGAGGTCCGCAGCCCGACCTTCTACGTGGTGCAGTTCCGCTACCCTGACGACGCTGCGCGCC
CGACCCGGGCCATCGCCGCCCAAGCGCCGAACTACAATTACGGCGCCAGCGCGAGGACCGAGTTCACGCCAACGCGCATC
TGGGATGACGGGACGTTCACTTATTTCGCCTTTCCAAGAAACGCCCCTGTGCCAGCGATCTTCCGCTACGCGGGCGGCCG
TGAACGCACGGTCAACACGCAAACTCCTGAAGACGGCGTGATCCGCGTCAGCGGCGTGAACCGCCAATGGGTCCTGCGAC
TGGGCGAAGAGGTGGTCTGCATCGAGGCGATCCCGCCCGCGGAGGCCACCTCATGA

Upstream 100 bases:

>100_bases
GTCCCGAAACCCGTCGCTCCATCGACGAGGTCTGGACCAATCCGTTTGGGTTTACCGTGCTCGAATATTCCATCCGCTCC
GACAGATTGGAGAACTGACG

Downstream 100 bases:

>100_bases
GCGATACCGGGAACACCGAGCTGGAAAAACGCCTCGCCGCCCTTGAGAAAGGCAGTGCCCGCGCGCCCATAGCGGCGCAG
CGCCGGTCGCCCTTTCTCGC

Product: conjugal transfer protein TrbG/VirB9/CagX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLFIRSLIFVIALLPGLASAEAIPRGGPNDSRVRLATYQEGQVYRLNVSLTHVTTIEFGEGESIRSIIAGDTEGFEIDGV
PGGQAFAIKPVARGVHTNVTVYTNRRSYYFNVEEVRSPTFYVVQFRYPDDAARPTRAIAAQAPNYNYGASARTEFTPTRI
WDDGTFTYFAFPRNAPVPAIFRYAGGRERTVNTQTPEDGVIRVSGVNRQWVLRLGEEVVCIEAIPPAEATS

Sequences:

>Translated_231_residues
MLFIRSLIFVIALLPGLASAEAIPRGGPNDSRVRLATYQEGQVYRLNVSLTHVTTIEFGEGESIRSIIAGDTEGFEIDGV
PGGQAFAIKPVARGVHTNVTVYTNRRSYYFNVEEVRSPTFYVVQFRYPDDAARPTRAIAAQAPNYNYGASARTEFTPTRI
WDDGTFTYFAFPRNAPVPAIFRYAGGRERTVNTQTPEDGVIRVSGVNRQWVLRLGEEVVCIEAIPPAEATS
>Mature_231_residues
MLFIRSLIFVIALLPGLASAEAIPRGGPNDSRVRLATYQEGQVYRLNVSLTHVTTIEFGEGESIRSIIAGDTEGFEIDGV
PGGQAFAIKPVARGVHTNVTVYTNRRSYYFNVEEVRSPTFYVVQFRYPDDAARPTRAIAAQAPNYNYGASARTEFTPTRI
WDDGTFTYFAFPRNAPVPAIFRYAGGRERTVNTQTPEDGVIRVSGVNRQWVLRLGEEVVCIEAIPPAEATS

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014142 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 25542; Mature: 25542

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIRSLIFVIALLPGLASAEAIPRGGPNDSRVRLATYQEGQVYRLNVSLTHVTTIEFGE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEECC
GESIRSIIAGDTEGFEIDGVPGGQAFAIKPVARGVHTNVTVYTNRRSYYFNVEEVRSPTF
CCCCHHHCCCCCCCEEECCCCCCCEEEEEHHHCCCCCEEEEEECCCEEEEEHHHHCCCEE
YVVQFRYPDDAARPTRAIAAQAPNYNYGASARTEFTPTRIWDDGTFTYFAFPRNAPVPAI
EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEE
FRYAGGRERTVNTQTPEDGVIRVSGVNRQWVLRLGEEVVCIEAIPPAEATS
EEECCCCCCEECCCCCCCCEEEEECCCHHEEEECCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MLFIRSLIFVIALLPGLASAEAIPRGGPNDSRVRLATYQEGQVYRLNVSLTHVTTIEFGE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEECC
GESIRSIIAGDTEGFEIDGVPGGQAFAIKPVARGVHTNVTVYTNRRSYYFNVEEVRSPTF
CCCCHHHCCCCCCCEEECCCCCCCEEEEEHHHCCCCCEEEEEECCCEEEEEHHHHCCCEE
YVVQFRYPDDAARPTRAIAAQAPNYNYGASARTEFTPTRIWDDGTFTYFAFPRNAPVPAI
EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEE
FRYAGGRERTVNTQTPEDGVIRVSGVNRQWVLRLGEEVVCIEAIPPAEATS
EEECCCCCCEECCCCCCCCEEEEECCCHHEEEECCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]