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The map label for this gene is 159046519

Identifier: 159046519

GI number: 159046519

Start: 39197

End: 39850

Strand: Direct

Name: 159046519

Synonym: Dshi_3980

Alternate gene names: NA

Gene position: 39197-39850 (Clockwise)

Preceding gene: 159046518

Following gene: 159046520

Centisome position: 31.03

GC content: 61.47

Gene sequence:

>654_bases
GTGGCGAGTGAACAAGAGATCATCGAGGAAGAACTGGTCTACGGTGCCTTGCGCCGCGAACGGCTCTGGCAACGCCTTGG
TCTGGCAGGTCTTGTCTTCGGCATCATCGGCTGTCTGAGTGCCGCGGCTGTCTCGATCCTCGATGTCGATCCGCCCCCCG
TCGTTGTCCCCTATGATCCCGCTACCGGCTTTGCACTCCCCGAGGCCTCGGTGGGCGCTTCCTCGGTGACCGCCAACCAG
GCGATCATCGAGGCGGAGGTCTTCCGCTATGTGACCGACCGGGAGATCTACAATCAGCTCGATAACGATCTGCGCATCCG
CAGCGTCCTGCGCCGCTCGGACGGGGCCGCCGAGAGCAGGCTGCGCCAGATATGGAACAGCGCAAATGAAAACTATCCAC
CGACCGTCTATGGCCCCAATGCCCGGCTCGACGTGGAAATTCTCAGCATCAACCGGATCGGATCCAACCGCGCCACCGTG
CGCTTGCGCAAGCGGCTGACCTCCATCAACGGCACCCAGACCGGGCTCTTCACCGCCACGCTTCTCTTCGAGTTCCGTCC
CGAAACCCGTCGCTCCATCGACGAGGTCTGGACCAATCCGTTTGGGTTTACCGTGCTCGAATATTCCATCCGCTCCGACA
GATTGGAGAACTGA

Upstream 100 bases:

>100_bases
ACGGGCGGCGTGATCGATGCCGCCACCATCGCCGAAGAGCAGCGCTTCATGGATTTCACCTTGCCGGACCTCCGGGCCGA
GTGATTGCGGGGTGTGACAC

Downstream 100 bases:

>100_bases
CGTTGTTGTTTATAAGATCGCTTATTTTTGTCATTGCCCTGTTGCCCGGCCTCGCCTCTGCCGAAGCGATCCCGCGCGGT
GGTCCAAATGACAGCCGCGT

Product: VirB8 family protein

Products: NA

Alternate protein names: VirB8 Family Protein; Conjugative Transfer Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MASEQEIIEEELVYGALRRERLWQRLGLAGLVFGIIGCLSAAAVSILDVDPPPVVVPYDPATGFALPEASVGASSVTANQ
AIIEAEVFRYVTDREIYNQLDNDLRIRSVLRRSDGAAESRLRQIWNSANENYPPTVYGPNARLDVEILSINRIGSNRATV
RLRKRLTSINGTQTGLFTATLLFEFRPETRRSIDEVWTNPFGFTVLEYSIRSDRLEN

Sequences:

>Translated_217_residues
MASEQEIIEEELVYGALRRERLWQRLGLAGLVFGIIGCLSAAAVSILDVDPPPVVVPYDPATGFALPEASVGASSVTANQ
AIIEAEVFRYVTDREIYNQLDNDLRIRSVLRRSDGAAESRLRQIWNSANENYPPTVYGPNARLDVEILSINRIGSNRATV
RLRKRLTSINGTQTGLFTATLLFEFRPETRRSIDEVWTNPFGFTVLEYSIRSDRLEN
>Mature_216_residues
ASEQEIIEEELVYGALRRERLWQRLGLAGLVFGIIGCLSAAAVSILDVDPPPVVVPYDPATGFALPEASVGASSVTANQA
IIEAEVFRYVTDREIYNQLDNDLRIRSVLRRSDGAAESRLRQIWNSANENYPPTVYGPNARLDVEILSINRIGSNRATVR
LRKRLTSINGTQTGLFTATLLFEFRPETRRSIDEVWTNPFGFTVLEYSIRSDRLEN

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24318; Mature: 24187

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEQEIIEEELVYGALRRERLWQRLGLAGLVFGIIGCLSAAAVSILDVDPPPVVVPYDP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCC
ATGFALPEASVGASSVTANQAIIEAEVFRYVTDREIYNQLDNDLRIRSVLRRSDGAAESR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH
LRQIWNSANENYPPTVYGPNARLDVEILSINRIGSNRATVRLRKRLTSINGTQTGLFTAT
HHHHHHHCCCCCCCEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHH
LLFEFRPETRRSIDEVWTNPFGFTVLEYSIRSDRLEN
HHHHCCCHHHHHHHHHHCCCCCHHEEEEHHHHCCCCC
>Mature Secondary Structure 
ASEQEIIEEELVYGALRRERLWQRLGLAGLVFGIIGCLSAAAVSILDVDPPPVVVPYDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCC
ATGFALPEASVGASSVTANQAIIEAEVFRYVTDREIYNQLDNDLRIRSVLRRSDGAAESR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH
LRQIWNSANENYPPTVYGPNARLDVEILSINRIGSNRATVRLRKRLTSINGTQTGLFTAT
HHHHHHHCCCCCCCEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHH
LLFEFRPETRRSIDEVWTNPFGFTVLEYSIRSDRLEN
HHHHCCCHHHHHHHHHHCCCCCHHEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA