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The map label for this gene is 159046477

Identifier: 159046477

GI number: 159046477

Start: 6140

End: 6748

Strand: Direct

Name: 159046477

Synonym: Dshi_3938

Alternate gene names: NA

Gene position: 6140-6748 (Clockwise)

Preceding gene: 159046475

Following gene: 159046478

Centisome position: 4.86

GC content: 60.26

Gene sequence:

>609_bases
ATGAAACGCAACACTTTACTCGCTGCAATGACCCTGGCTGCAACCGCCCTTGGCGGTGCCGCATTCGCGGACGCCAACCA
CGGGCGTGGGGGACAATTTGGCGCCCAGAGCGGACCAGGCATGATGCAGAACGGTGGTCCCGGTATGATGGGGAACATGG
GCGGAATGATGGACATGATGAAGCGCATGCACGGAAACATGATGGGCGCAGGCATGATGGGCGCAGGCATGGGCAGTGGT
ATGATGAGCCCAGGCATGGCTGGCGGCATGATGCAAATGTTCGACACTGATGGAGACGGCACAACGACGCCGGAAGAAAT
GCGCACGCAGCTGCAGGCCAAGCTTTCCGAGTTTGACAGCGACGGGGATGGAAGCCTCTCGATTACCGAGTTTGAAGCTC
TCCACAGCGCGATGATCCGCGAAATGATGGTGGATCGCTTCCAACACCTCGATGCCGATGGCGACGGCGCGGTGACGCCG
GAAGAGATGGCCGCTCCTGCCGATAGGATGGAGCGGATGCAGATGATGCGGTCGAATATGGCAGATGCGCCTGCGCGGCC
TGGCAACGGTCAGGGCATGGGCAACGGCTCCATGATGCAGGACAACTGA

Upstream 100 bases:

>100_bases
TTGTGACCTCGCGATACAAAACACCGGCTCGCGTGGCATTCCGCATCTGCAGGTGCCCCCCATATGCTGGGTATCGCAAC
ACTGACACGAGGTGATCGAA

Downstream 100 bases:

>100_bases
GCCAATGGGTGCCGGTTTTTTTCCGGCACCCGTCCTCACAACCCCAAAACCATTCGCGGTCGGGACATTGAACCGAACCG
CGACCTGAACCGTTTAGCCT

Product: calcium-binding EF-hand-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKRNTLLAAMTLAATALGGAAFADANHGRGGQFGAQSGPGMMQNGGPGMMGNMGGMMDMMKRMHGNMMGAGMMGAGMGSG
MMSPGMAGGMMQMFDTDGDGTTTPEEMRTQLQAKLSEFDSDGDGSLSITEFEALHSAMIREMMVDRFQHLDADGDGAVTP
EEMAAPADRMERMQMMRSNMADAPARPGNGQGMGNGSMMQDN

Sequences:

>Translated_202_residues
MKRNTLLAAMTLAATALGGAAFADANHGRGGQFGAQSGPGMMQNGGPGMMGNMGGMMDMMKRMHGNMMGAGMMGAGMGSG
MMSPGMAGGMMQMFDTDGDGTTTPEEMRTQLQAKLSEFDSDGDGSLSITEFEALHSAMIREMMVDRFQHLDADGDGAVTP
EEMAAPADRMERMQMMRSNMADAPARPGNGQGMGNGSMMQDN
>Mature_202_residues
MKRNTLLAAMTLAATALGGAAFADANHGRGGQFGAQSGPGMMQNGGPGMMGNMGGMMDMMKRMHGNMMGAGMMGAGMGSG
MMSPGMAGGMMQMFDTDGDGTTTPEEMRTQLQAKLSEFDSDGDGSLSITEFEALHSAMIREMMVDRFQHLDADGDGAVTP
EEMAAPADRMERMQMMRSNMADAPARPGNGQGMGNGSMMQDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21121; Mature: 21121

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
17.8 %Met     (Translated Protein)
17.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
17.8 %Met     (Mature Protein)
17.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNTLLAAMTLAATALGGAAFADANHGRGGQFGAQSGPGMMQNGGPGMMGNMGGMMDMM
CCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
KRMHGNMMGAGMMGAGMGSGMMSPGMAGGMMQMFDTDGDGTTTPEEMRTQLQAKLSEFDS
HHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
DGDGSLSITEFEALHSAMIREMMVDRFQHLDADGDGAVTPEEMAAPADRMERMQMMRSNM
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
ADAPARPGNGQGMGNGSMMQDN
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRNTLLAAMTLAATALGGAAFADANHGRGGQFGAQSGPGMMQNGGPGMMGNMGGMMDMM
CCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
KRMHGNMMGAGMMGAGMGSGMMSPGMAGGMMQMFDTDGDGTTTPEEMRTQLQAKLSEFDS
HHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
DGDGSLSITEFEALHSAMIREMMVDRFQHLDADGDGAVTPEEMAAPADRMERMQMMRSNM
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
ADAPARPGNGQGMGNGSMMQDN
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA