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The map label for this gene is ynhG [H]

Identifier: 159046475

GI number: 159046475

Start: 4443

End: 5108

Strand: Direct

Name: ynhG [H]

Synonym: Dshi_3936

Alternate gene names: 159046475

Gene position: 4443-5108 (Clockwise)

Preceding gene: 159046474

Following gene: 159046477

Centisome position: 3.52

GC content: 58.86

Gene sequence:

>666_bases
ATGGTTACAAGACGACACTTCCTTGCACTTTCCGGCTCGCTGTTTTCAGCGTCTCTGAGTTCGCCAGCATTCGCTAAGAC
CTGGCCGTCAACAGCCGAAAAAGCAGCTTGGGATGCGCAGATCACGCCCGCCAACTATGACCCGGCAACAACCAACCCAT
GGGGGCTGCATCCCAGGCTGCTGCCGCAACGCGTTTTGGCGAATGACGGTTTGCGCCCGGGTGACATTCACGTCGATGCG
ATCGCGCGCTATCTGTACCATATCGAGGAAGGTGGCACCGCGATGCGATACGGGGTGGCGATTGCCAAGGGCGATCTCTA
TGAACCCGGCACCTATACGATCCGCCGAAAGGTCGAATGGCCGCACTGGACGCCAACGCAGTCAATGATCGAACGCGATC
CGGAGGCTTACGAGCGGTTTGCCGACGGTATGGAGCCCGGCCCCAACAATGCCTTGGGCAGCAGGGCTTTGTATCTATTC
GTCGGAGATCGGGATACGTACCTTCGAATTCACGGAACGCCGAGCCCTCGCAGCATTGGCGGCCGGGCCAGTTCGGGATG
CGTGCGCATGGTGATGGCCCACATCAATGATCTCTATCCGAATGTCGCTGTCGGATCGACGGCGTTCCTTTACTCGGCCG
AAGACAGCGTTACCGCTCGAAGCTAA

Upstream 100 bases:

>100_bases
GGTCGCGATCGCAAGACATCAAAAGGTTCGGTGGCATGGGGTCGCGGACGTTTCTTGAATCGTCCCGCATTCATCGAAAA
CAAACAAAGGGCTTCGCTTC

Downstream 100 bases:

>100_bases
CCTATTGCATCTTTGGCTCACACGCCGAGGACTGCGTCGTGCAGGGACATCTTCCAATGAATTGTTGGACGAACACTCAC
GGCTGTGTCGCAAGTGAACT

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MVTRRHFLALSGSLFSASLSSPAFAKTWPSTAEKAAWDAQITPANYDPATTNPWGLHPRLLPQRVLANDGLRPGDIHVDA
IARYLYHIEEGGTAMRYGVAIAKGDLYEPGTYTIRRKVEWPHWTPTQSMIERDPEAYERFADGMEPGPNNALGSRALYLF
VGDRDTYLRIHGTPSPRSIGGRASSGCVRMVMAHINDLYPNVAVGSTAFLYSAEDSVTARS

Sequences:

>Translated_221_residues
MVTRRHFLALSGSLFSASLSSPAFAKTWPSTAEKAAWDAQITPANYDPATTNPWGLHPRLLPQRVLANDGLRPGDIHVDA
IARYLYHIEEGGTAMRYGVAIAKGDLYEPGTYTIRRKVEWPHWTPTQSMIERDPEAYERFADGMEPGPNNALGSRALYLF
VGDRDTYLRIHGTPSPRSIGGRASSGCVRMVMAHINDLYPNVAVGSTAFLYSAEDSVTARS
>Mature_221_residues
MVTRRHFLALSGSLFSASLSSPAFAKTWPSTAEKAAWDAQITPANYDPATTNPWGLHPRLLPQRVLANDGLRPGDIHVDA
IARYLYHIEEGGTAMRYGVAIAKGDLYEPGTYTIRRKVEWPHWTPTQSMIERDPEAYERFADGMEPGPNNALGSRALYLF
VGDRDTYLRIHGTPSPRSIGGRASSGCVRMVMAHINDLYPNVAVGSTAFLYSAEDSVTARS

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=147, Percent_Identity=35.3741496598639, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788299, Length=148, Percent_Identity=29.7297297297297, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 24326; Mature: 24326

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTRRHFLALSGSLFSASLSSPAFAKTWPSTAEKAAWDAQITPANYDPATTNPWGLHPRL
CCCCCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCHHH
LPQRVLANDGLRPGDIHVDAIARYLYHIEEGGTAMRYGVAIAKGDLYEPGTYTIRRKVEW
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEEECC
PHWTPTQSMIERDPEAYERFADGMEPGPNNALGSRALYLFVGDRDTYLRIHGTPSPRSIG
CCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCC
GRASSGCVRMVMAHINDLYPNVAVGSTAFLYSAEDSVTARS
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MVTRRHFLALSGSLFSASLSSPAFAKTWPSTAEKAAWDAQITPANYDPATTNPWGLHPRL
CCCCCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCHHH
LPQRVLANDGLRPGDIHVDAIARYLYHIEEGGTAMRYGVAIAKGDLYEPGTYTIRRKVEW
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEEECC
PHWTPTQSMIERDPEAYERFADGMEPGPNNALGSRALYLFVGDRDTYLRIHGTPSPRSIG
CCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCC
GRASSGCVRMVMAHINDLYPNVAVGSTAFLYSAEDSVTARS
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]