Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is tauC [C]
Identifier: 158423976
GI number: 158423976
Start: 2678055
End: 2678864
Strand: Reverse
Name: tauC [C]
Synonym: AZC_2352
Alternate gene names: 158423976
Gene position: 2678864-2678055 (Counterclockwise)
Preceding gene: 158423977
Following gene: 158423975
Centisome position: 49.89
GC content: 64.69
Gene sequence:
>810_bases ATGGCGTCACGACGCCCGGGATTGTCCGCGCACGCCTTCTTCAATTCGCCGTCCGTGAAGCCCGTCGCGCTTCTTGTCGT GCTTATCGCGCTGTGGGACGTGAGCGTGCGGCTGTTCAAGATTCCGCCCTATCTCATTCCGGCGCCGTGGGATGTGTTCA TGGCCTTCCGGACGGAAGGCGGCATGCTGCTCCAGGAAGCCATCCCCACCACCATCGCGACGGTATCCGGCTTCGCGCTG TCCGCGCTGATCGGCATTCCGCTCGCCATGATGATCGCCGGCTCCCGCACCGTGGAGGGCTATCTCTATCCGCTGCTCGT CTTCTCCCAATCCATCCCGAAGGTCGCCATCGCGCCGCTCTTCGTGGTCTGGTTCGGGTTCGGGATGGTGCCGAAGGTCA TCTCCGCCTTCCTGCTCGGGGTCTTTCCCGTCATCGTCGCCGGCGTTCAGGGCTTCAAGTCCGTCGAAGGCGACATGCGG GATCTCGCTCGCGCCATGAAGGCCTCCAAGCTCCAGACCTTTGCCATGGTGAGCCTGCCCCATGCCATGCCGGCCATATT CGCCGGCCTGAAGGTGTCGGTGACGCTCGCGGTGGTGGGGGCGGTGGTCGGCGAGTTCGTCGGCGCCAATTCCGGGCTGG GCTTCGTGCTCCAACGTTCCATCGGCAATTTCGAGCTCCCCACCATGTTCGCGGCGCTGATCCTGCTGGCGCTCATCGGC GTGGTGCTCTTCTGGGTCGTCGATGTCATCGAGCGTCTGTGCGTCCCGTGGCACGCCAGCCAGCGGCAGGACGTGTTCGC TACCGCCTGA
Upstream 100 bases:
>100_bases TGCGGCACCGCTTGACAGGGCCTCGACCCTCTGCATGTAATTCACCGGTTAGTTATTTAGCGAGCCGCAAGAGCCCGCAG ATACATGGGAGGAGATCGCC
Downstream 100 bases:
>100_bases TCCGGCGCCGCAAGGCGGCGCCCTGTGTGCGTGATGCGTTCGCCAGCAAAGAAAAATGTCCGGGAGGAAATCATGACCGT TGTTCGCCGCACCGCCCTGC
Product: ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MASRRPGLSAHAFFNSPSVKPVALLVVLIALWDVSVRLFKIPPYLIPAPWDVFMAFRTEGGMLLQEAIPTTIATVSGFAL SALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPLFVVWFGFGMVPKVISAFLLGVFPVIVAGVQGFKSVEGDMR DLARAMKASKLQTFAMVSLPHAMPAIFAGLKVSVTLAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTMFAALILLALIG VVLFWVVDVIERLCVPWHASQRQDVFATA
Sequences:
>Translated_269_residues MASRRPGLSAHAFFNSPSVKPVALLVVLIALWDVSVRLFKIPPYLIPAPWDVFMAFRTEGGMLLQEAIPTTIATVSGFAL SALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPLFVVWFGFGMVPKVISAFLLGVFPVIVAGVQGFKSVEGDMR DLARAMKASKLQTFAMVSLPHAMPAIFAGLKVSVTLAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTMFAALILLALIG VVLFWVVDVIERLCVPWHASQRQDVFATA >Mature_268_residues ASRRPGLSAHAFFNSPSVKPVALLVVLIALWDVSVRLFKIPPYLIPAPWDVFMAFRTEGGMLLQEAIPTTIATVSGFALS ALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPLFVVWFGFGMVPKVISAFLLGVFPVIVAGVQGFKSVEGDMRD LARAMKASKLQTFAMVSLPHAMPAIFAGLKVSVTLAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTMFAALILLALIGV VLFWVVDVIERLCVPWHASQRQDVFATA
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=246, Percent_Identity=28.0487804878049, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI87081802, Length=242, Percent_Identity=26.4462809917355, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789033, Length=144, Percent_Identity=31.9444444444444, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788449, Length=133, Percent_Identity=30.8270676691729, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28791; Mature: 28660
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRRPGLSAHAFFNSPSVKPVALLVVLIALWDVSVRLFKIPPYLIPAPWDVFMAFRTEG CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHCCC GMLLQEAIPTTIATVSGFALSALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FVVWFGFGMVPKVISAFLLGVFPVIVAGVQGFKSVEGDMRDLARAMKASKLQTFAMVSLP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH HAMPAIFAGLKVSVTLAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTMFAALILLALIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH VVLFWVVDVIERLCVPWHASQRQDVFATA HHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ASRRPGLSAHAFFNSPSVKPVALLVVLIALWDVSVRLFKIPPYLIPAPWDVFMAFRTEG CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHCCC GMLLQEAIPTTIATVSGFALSALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FVVWFGFGMVPKVISAFLLGVFPVIVAGVQGFKSVEGDMRDLARAMKASKLQTFAMVSLP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH HAMPAIFAGLKVSVTLAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTMFAALILLALIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH VVLFWVVDVIERLCVPWHASQRQDVFATA HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]