Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is purL
Identifier: 158423855
GI number: 158423855
Start: 2550717
End: 2552924
Strand: Direct
Name: purL
Synonym: AZC_2231
Alternate gene names: 158423855
Gene position: 2550717-2552924 (Clockwise)
Preceding gene: 158423854
Following gene: 158423856
Centisome position: 47.5
GC content: 67.8
Gene sequence:
>2208_bases GTGATCCCGAACACCCCCAGCATCACCCCGGAACTCGTCGCTGAGCACGGCCTGAAGCCGGACGAATACCAGCGCTTCGT GGAGCTGATCGGGCGCGAGCCGACCATCACGGAGCTCGGCATCGTTTCCGCCATGTGGAACGAGCACTGCTCCTACAAGT CCTCCAAGGTCTGGCTGCGCACGCTGCCCACCAAGGGCCCGCGCGTCATCCAGGGGCCGGGCGAGAATGCCGGCGTCGTG GACATCGGCGACGGTCTGGCCGTGGTCTTCAAGATGGAGAGCCACAACCACCCGTCCTTCATCGAGCCTTATCAGGGCGC GGGCACGGGCGTGGGTGGCATCCTGCGCGACGTCTTCACCATGGGTGCGCGCCCCATTGCGGCCCTGAACGCCCTGCGCT TCGGCGACCCCCACCATCCGCGCACCCGCCGCCTGCTGGCGGGCGTGGTGGCCGGCATCGGCGGCTACGGCAATTCCTTC GGCGTGCCCACTGTGGGCGGCTCCGTGGGCTTCCACGAGCGCTACAACGGCAACATCCTCGTCAACGCCATGGCGGTCGG CCTCGCGAAGACGGATGAGATCTTCTATGCGGCGGCGGCCGGCGTCGGCCGCTCCATCGTCTATCTCGGCTCCAAGACCG GCCGCGACGGCATCCACGGCGCCACCATGGCCTCCGCCGAATTCGGCGCGGACGCCGAGGAAAAGCGACCCACCGTGCAG GTGGGCGACCCCTTCGCCGAGAAGCTGCTGCTGGAAGCCTGCCTCGAGATCATGCAGGCGGGCTGCGTGGTGGCGATCCA GGACATGGGCGCCGCCGGCCTCACCTGCTCGGCGGTCGAGATGGGCGCCAAGGGCGACCTCGGCGTGGAACTGGACCTCA ACGCCGTGCCGTGCCGCGAAACCGGCATGACCGCTTATGAGATGATGCTGTCCGAGAGCCAGGAGCGCATGCTCATGGTG ATCGCGGACGGCAAGGAAGATCAGGCCGAGGCCATCTTCCGCAAGTGGGGTCTGGACTTCGCCATCATCGGCAAGACCAC CGATACGCTCCGTTTCGTCGTGAAGCACGACGGCGACGTGAAGGCTGACCTGCCCATCAAGGAACTGGGCGACGAGGCGC CGGAATATTACCGCCCCTTCACCGAGACGCCGCCGCGCCCCGTGCTCGGCCCGTCCGACGTGAATCATGCGGTGTCCGTC GCCGACGCGCTGGAGCGCCTCATCGCCTCGCCGGACCTGTGCTCCAAGCGCTGGGTCTGGGAGCAGTATGACCACCTCAT CCTCGGCAACACCGTGCAGCGCCCGGGCGGCGATGCGGCCGTGGTGCGTGTGAACGAAGGCCCGAAGGCGTTGGCGCTGA CCACCGACGTGACGCCCCGCTATTGCGAGGCCGATCCCTTCGAGGGCGGCAAGCAGGCGGTCGCCGAGGCGTGGCGCAAT CTCACCGCCGTGGGTGCCACCCCCATCGCCGTGACCGACAACCTCAATTTTGGCAATCCCGAGAAGCCCGAGATCATGGG CCAGTTCGTGGGCTGCGTGAAAGGCATCGGCGCGGCCTGCGAGGCGCTCGACTTCCCGGTCGTCTCCGGCAACGTCAGTC TCTACAACGAGACCAACGGGCAGGGCATCCTGCCCACCCCCACCATCGGTGGCGTCGGCCTTATCGACGATGTGGAGCAG AGCATGACGCTCGCCTTCAAGGCGGCGGGCGAGGCCATCTTCGTGGTCGGCAAGACGGACGGCTGGCTCGGCTCCTCCGC TTATCTCTACACCGTCTGCGACCGCGAGGACGGCGCTCCGCCGCCGGTGGATCTGGTGGCCGAGAAGCGCAACGGTGACT TCGTGCGCGGCCTCATCAAGGACGACTTCATCACCGCCGCCCATGACGTCTCCGACGGCGGCCTGCTCGTCGCCATCGCC GAGATGGCCATGGCGGGCCGCATCGGCGCGTCGGTGGATGGCGTGCCCGCGGGCATGCCGGCCCATTCCTTCTGGTTCGG CGAGGATCAGGCCCGCTATGTGGTGACGCTCCCGGCCAATCAGGCCGCCGAGATGGTGCGCCGGGCGGAAGCGGCGGGCG TGCCCGTGACCAAGCTCGGCAAGACCGGCGGCGACAAGATCACGCTGGCCAACGAGCGGCCGATCTTCGTCGAAGGTCTG CGCGATCGCCACGACAGCTGGCTGCCCATCTATATGGGCGCCAACTAA
Upstream 100 bases:
>100_bases GAAAGCCTTGCCGGCGCGCTCAAGGCGGCCTGACGCGCCTGCGGCGCGCTTCCGCGCCCGGCGCCTTTCCCAAAGACCTG GATTGATCGGACGGACGAAC
Downstream 100 bases:
>100_bases AGGTCTGATCTCAGAGGCGGGGCCGCGCGCCCCGCCCGGAAACGAGGAACAACGCCATGGCCATGGACGCCGGTGACATC GAGCGCCTCATCAAGGCGGC
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MIPNTPSITPELVAEHGLKPDEYQRFVELIGREPTITELGIVSAMWNEHCSYKSSKVWLRTLPTKGPRVIQGPGENAGVV DIGDGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFTMGARPIAALNALRFGDPHHPRTRRLLAGVVAGIGGYGNSF GVPTVGGSVGFHERYNGNILVNAMAVGLAKTDEIFYAAAAGVGRSIVYLGSKTGRDGIHGATMASAEFGADAEEKRPTVQ VGDPFAEKLLLEACLEIMQAGCVVAIQDMGAAGLTCSAVEMGAKGDLGVELDLNAVPCRETGMTAYEMMLSESQERMLMV IADGKEDQAEAIFRKWGLDFAIIGKTTDTLRFVVKHDGDVKADLPIKELGDEAPEYYRPFTETPPRPVLGPSDVNHAVSV ADALERLIASPDLCSKRWVWEQYDHLILGNTVQRPGGDAAVVRVNEGPKALALTTDVTPRYCEADPFEGGKQAVAEAWRN LTAVGATPIAVTDNLNFGNPEKPEIMGQFVGCVKGIGAACEALDFPVVSGNVSLYNETNGQGILPTPTIGGVGLIDDVEQ SMTLAFKAAGEAIFVVGKTDGWLGSSAYLYTVCDREDGAPPPVDLVAEKRNGDFVRGLIKDDFITAAHDVSDGGLLVAIA EMAMAGRIGASVDGVPAGMPAHSFWFGEDQARYVVTLPANQAAEMVRRAEAAGVPVTKLGKTGGDKITLANERPIFVEGL RDRHDSWLPIYMGAN
Sequences:
>Translated_735_residues MIPNTPSITPELVAEHGLKPDEYQRFVELIGREPTITELGIVSAMWNEHCSYKSSKVWLRTLPTKGPRVIQGPGENAGVV DIGDGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFTMGARPIAALNALRFGDPHHPRTRRLLAGVVAGIGGYGNSF GVPTVGGSVGFHERYNGNILVNAMAVGLAKTDEIFYAAAAGVGRSIVYLGSKTGRDGIHGATMASAEFGADAEEKRPTVQ VGDPFAEKLLLEACLEIMQAGCVVAIQDMGAAGLTCSAVEMGAKGDLGVELDLNAVPCRETGMTAYEMMLSESQERMLMV IADGKEDQAEAIFRKWGLDFAIIGKTTDTLRFVVKHDGDVKADLPIKELGDEAPEYYRPFTETPPRPVLGPSDVNHAVSV ADALERLIASPDLCSKRWVWEQYDHLILGNTVQRPGGDAAVVRVNEGPKALALTTDVTPRYCEADPFEGGKQAVAEAWRN LTAVGATPIAVTDNLNFGNPEKPEIMGQFVGCVKGIGAACEALDFPVVSGNVSLYNETNGQGILPTPTIGGVGLIDDVEQ SMTLAFKAAGEAIFVVGKTDGWLGSSAYLYTVCDREDGAPPPVDLVAEKRNGDFVRGLIKDDFITAAHDVSDGGLLVAIA EMAMAGRIGASVDGVPAGMPAHSFWFGEDQARYVVTLPANQAAEMVRRAEAAGVPVTKLGKTGGDKITLANERPIFVEGL RDRHDSWLPIYMGAN >Mature_735_residues MIPNTPSITPELVAEHGLKPDEYQRFVELIGREPTITELGIVSAMWNEHCSYKSSKVWLRTLPTKGPRVIQGPGENAGVV DIGDGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFTMGARPIAALNALRFGDPHHPRTRRLLAGVVAGIGGYGNSF GVPTVGGSVGFHERYNGNILVNAMAVGLAKTDEIFYAAAAGVGRSIVYLGSKTGRDGIHGATMASAEFGADAEEKRPTVQ VGDPFAEKLLLEACLEIMQAGCVVAIQDMGAAGLTCSAVEMGAKGDLGVELDLNAVPCRETGMTAYEMMLSESQERMLMV IADGKEDQAEAIFRKWGLDFAIIGKTTDTLRFVVKHDGDVKADLPIKELGDEAPEYYRPFTETPPRPVLGPSDVNHAVSV ADALERLIASPDLCSKRWVWEQYDHLILGNTVQRPGGDAAVVRVNEGPKALALTTDVTPRYCEADPFEGGKQAVAEAWRN LTAVGATPIAVTDNLNFGNPEKPEIMGQFVGCVKGIGAACEALDFPVVSGNVSLYNETNGQGILPTPTIGGVGLIDDVEQ SMTLAFKAAGEAIFVVGKTDGWLGSSAYLYTVCDREDGAPPPVDLVAEKRNGDFVRGLIKDDFITAAHDVSDGGLLVAIA EMAMAGRIGASVDGVPAGMPAHSFWFGEDQARYVVTLPANQAAEMVRRAEAAGVPVTKLGKTGGDKITLANERPIFVEGL RDRHDSWLPIYMGAN
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Homo sapiens, GI31657129, Length=694, Percent_Identity=25.6484149855908, Blast_Score=113, Evalue=8e-25, Organism=Escherichia coli, GI48994899, Length=816, Percent_Identity=25, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17553022, Length=651, Percent_Identity=23.0414746543779, Blast_Score=105, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321498, Length=739, Percent_Identity=23.4100135317997, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24582111, Length=740, Percent_Identity=24.8648648648649, Blast_Score=107, Evalue=4e-23, Organism=Drosophila melanogaster, GI24582109, Length=740, Percent_Identity=24.8648648648649, Blast_Score=107, Evalue=4e-23, Organism=Drosophila melanogaster, GI17137292, Length=740, Percent_Identity=24.8648648648649, Blast_Score=107, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_AZOC5 (A8I8B0)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001525147.1 - ProteinModelPortal: A8I8B0 - SMR: A8I8B0 - GeneID: 5689460 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_2231 - HOGENOM: HBG311214 - OMA: YGNSFGV - ProtClustDB: PRK01213 - BioCyc: ACAU438753:AZC_2231-MONOMER - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 78146; Mature: 78146
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPNTPSITPELVAEHGLKPDEYQRFVELIGREPTITELGIVSAMWNEHCSYKSSKVWLR CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE TLPTKGPRVIQGPGENAGVVDIGDGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFT ECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH MGARPIAALNALRFGDPHHPRTRRLLAGVVAGIGGYGNSFGVPTVGGSVGFHERYNGNIL HCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCEE VNAMAVGLAKTDEIFYAAAAGVGRSIVYLGSKTGRDGIHGATMASAEFGADAEEKRPTVQ EEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCEECCHHCCCCHHHCCCEEE VGDPFAEKLLLEACLEIMQAGCVVAIQDMGAAGLTCSAVEMGAKGDLGVELDLNAVPCRE ECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCCEEEECCCCCCCC TGMTAYEMMLSESQERMLMVIADGKEDQAEAIFRKWGLDFAIIGKTTDTLRFVVKHDGDV CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCC KADLPIKELGDEAPEYYRPFTETPPRPVLGPSDVNHAVSVADALERLIASPDLCSKRWVW EECCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCH EQYDHLILGNTVQRPGGDAAVVRVNEGPKALALTTDVTPRYCEADPFEGGKQAVAEAWRN HHHCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC LTAVGATPIAVTDNLNFGNPEKPEIMGQFVGCVKGIGAACEALDFPVVSGNVSLYNETNG EEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCC QGILPTPTIGGVGLIDDVEQSMTLAFKAAGEAIFVVGKTDGWLGSSAYLYTVCDREDGAP CEECCCCCCCCCCCHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCC PPVDLVAEKRNGDFVRGLIKDDFITAAHDVSDGGLLVAIAEMAMAGRIGASVDGVPAGMP CCHHEEEECCCCCEEEHHHHHCCEEHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCC AHSFWFGEDQARYVVTLPANQAAEMVRRAEAAGVPVTKLGKTGGDKITLANERPIFVEGL CCCEECCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCEEEECH RDRHDSWLPIYMGAN HCCCCCEEEEEECCC >Mature Secondary Structure MIPNTPSITPELVAEHGLKPDEYQRFVELIGREPTITELGIVSAMWNEHCSYKSSKVWLR CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE TLPTKGPRVIQGPGENAGVVDIGDGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFT ECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH MGARPIAALNALRFGDPHHPRTRRLLAGVVAGIGGYGNSFGVPTVGGSVGFHERYNGNIL HCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCEE VNAMAVGLAKTDEIFYAAAAGVGRSIVYLGSKTGRDGIHGATMASAEFGADAEEKRPTVQ EEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCEECCHHCCCCHHHCCCEEE VGDPFAEKLLLEACLEIMQAGCVVAIQDMGAAGLTCSAVEMGAKGDLGVELDLNAVPCRE ECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCCEEEECCCCCCCC TGMTAYEMMLSESQERMLMVIADGKEDQAEAIFRKWGLDFAIIGKTTDTLRFVVKHDGDV CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCC KADLPIKELGDEAPEYYRPFTETPPRPVLGPSDVNHAVSVADALERLIASPDLCSKRWVW EECCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCH EQYDHLILGNTVQRPGGDAAVVRVNEGPKALALTTDVTPRYCEADPFEGGKQAVAEAWRN HHHCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC LTAVGATPIAVTDNLNFGNPEKPEIMGQFVGCVKGIGAACEALDFPVVSGNVSLYNETNG EEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCC QGILPTPTIGGVGLIDDVEQSMTLAFKAAGEAIFVVGKTDGWLGSSAYLYTVCDREDGAP CEECCCCCCCCCCCHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCC PPVDLVAEKRNGDFVRGLIKDDFITAAHDVSDGGLLVAIAEMAMAGRIGASVDGVPAGMP CCHHEEEECCCCCEEEHHHHHCCEEHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCC AHSFWFGEDQARYVVTLPANQAAEMVRRAEAAGVPVTKLGKTGGDKITLANERPIFVEGL CCCEECCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCEEEECH RDRHDSWLPIYMGAN HCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA