Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423781
Identifier: 158423781
GI number: 158423781
Start: 2471021
End: 2471935
Strand: Direct
Name: 158423781
Synonym: AZC_2157
Alternate gene names: NA
Gene position: 2471021-2471935 (Clockwise)
Preceding gene: 158423780
Following gene: 158423782
Centisome position: 46.02
GC content: 71.15
Gene sequence:
>915_bases GTGACGCAGGTCATCGACCTCTCCCGCCTGCCGGCGCCCGACGCCATCGAGGCGCTCGATTACGAGACGCTGCAGGCAGC CTTCCTCAGCCGCTTCACCGCTGCCTGGGACGCCGCCCGCGCCCTCGATCCCTCCCTGCCGGCCTGGGACGTGGGCACGC TGGAGACGGACCCGGCGGTCATCGCCTCGCAGGCCTGGTCCTATCTGCGCCTGCTCGATCGGGCGCGGGTCAACGATGCG GTGCGGGCCGTCCTCGCGCCGCTCGCCAAAGGCAGCGACCTCGACGCGGTGGCCGCCCGCATCGGCGTCCAGCGCCTGAC CGTGACGCCCGCCACCGAGACCACGGCGGCGGTGATGGAGAGCGATGAGCGCCTGCTCCAGCGTTATTTGCTGGCCTTCA CCCGGCCGGCCGCCGGCAGCGCCGAGCGCTATCTGTTCGAGGCCTACACCGCCTGGCCGCAGTTGCTGCATGCCTCCGTC ATCGGCCGGGCGATCCACGGCCGGCGGGGCGACACCGACATCGTCATCGCCGGCCCAGGTGGGCGCGACGCGACCGATGC CGAGATGGCGCTCGTCCGGAGTGCAGTGACGGCGCCTTCCGTGAAGCCGGAAGCGACCTCCGTCTCGGTGCTTCGGGCCA CGCGGCGTCTTTACGCGGTACGTGGAAAGCTCCTCCTGCCGGCTGGCCCTGATGCGGAGACCGTTCGGCTGGAAGCCATC ACCCGCATCACCGCCGCAGCGGCCGAGAGGACGCGGATCGGCGCCGAGGTGCCGGCCGTCTTCCTCAGCGGCCGGGCTTA TGGCCTCTCGATCCAGCGCGTGGATCTGAGTGAGCCGGCGTCTGACATCCCTTCGGCGCCTTATGCGATCCCGGTGCTCG GTGAAGTGGCGCTCACCGTGGAGGTGGCGCCATGA
Upstream 100 bases:
>100_bases CCTATTACCCGGAAGGGCGTTTCGGCGATTACGGCAAGGCCATCCCCATCGGCTATGGCGCGCCCGTCGTGCTCGCCCAG CAGGTCGCACGGAGGATGGC
Downstream 100 bases:
>100_bases CGGATGCCGCCGACCTCCTGCCGGACAACGCCCGCCCGTTCGAGCAGGCGCTCGCCCATGCCATGACCGACACCCTGCCG GTGCCGATCGCGCAGACCCT
Product: phage-related baseplate assembly protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Phage Protein Gp; Baseplate Assembly Protein
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTQVIDLSRLPAPDAIEALDYETLQAAFLSRFTAAWDAARALDPSLPAWDVGTLETDPAVIASQAWSYLRLLDRARVNDA VRAVLAPLAKGSDLDAVAARIGVQRLTVTPATETTAAVMESDERLLQRYLLAFTRPAAGSAERYLFEAYTAWPQLLHASV IGRAIHGRRGDTDIVIAGPGGRDATDAEMALVRSAVTAPSVKPEATSVSVLRATRRLYAVRGKLLLPAGPDAETVRLEAI TRITAAAAERTRIGAEVPAVFLSGRAYGLSIQRVDLSEPASDIPSAPYAIPVLGEVALTVEVAP
Sequences:
>Translated_304_residues MTQVIDLSRLPAPDAIEALDYETLQAAFLSRFTAAWDAARALDPSLPAWDVGTLETDPAVIASQAWSYLRLLDRARVNDA VRAVLAPLAKGSDLDAVAARIGVQRLTVTPATETTAAVMESDERLLQRYLLAFTRPAAGSAERYLFEAYTAWPQLLHASV IGRAIHGRRGDTDIVIAGPGGRDATDAEMALVRSAVTAPSVKPEATSVSVLRATRRLYAVRGKLLLPAGPDAETVRLEAI TRITAAAAERTRIGAEVPAVFLSGRAYGLSIQRVDLSEPASDIPSAPYAIPVLGEVALTVEVAP >Mature_303_residues TQVIDLSRLPAPDAIEALDYETLQAAFLSRFTAAWDAARALDPSLPAWDVGTLETDPAVIASQAWSYLRLLDRARVNDAV RAVLAPLAKGSDLDAVAARIGVQRLTVTPATETTAAVMESDERLLQRYLLAFTRPAAGSAERYLFEAYTAWPQLLHASVI GRAIHGRRGDTDIVIAGPGGRDATDAEMALVRSAVTAPSVKPEATSVSVLRATRRLYAVRGKLLLPAGPDAETVRLEAIT RITAAAAERTRIGAEVPAVFLSGRAYGLSIQRVDLSEPASDIPSAPYAIPVLGEVALTVEVAP
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32330; Mature: 32199
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVIDLSRLPAPDAIEALDYETLQAAFLSRFTAAWDAARALDPSLPAWDVGTLETDPAV CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH IASQAWSYLRLLDRARVNDAVRAVLAPLAKGSDLDAVAARIGVQRLTVTPATETTAAVME HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHH SDERLLQRYLLAFTRPAAGSAERYLFEAYTAWPQLLHASVIGRAIHGRRGDTDIVIAGPG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC GRDATDAEMALVRSAVTAPSVKPEATSVSVLRATRRLYAVRGKLLLPAGPDAETVRLEAI CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHH TRITAAAAERTRIGAEVPAVFLSGRAYGLSIQRVDLSEPASDIPSAPYAIPVLGEVALTV HHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCCCHHHCCCCCEEEEEECCEEEEE EVAP EECC >Mature Secondary Structure TQVIDLSRLPAPDAIEALDYETLQAAFLSRFTAAWDAARALDPSLPAWDVGTLETDPAV CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH IASQAWSYLRLLDRARVNDAVRAVLAPLAKGSDLDAVAARIGVQRLTVTPATETTAAVME HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHH SDERLLQRYLLAFTRPAAGSAERYLFEAYTAWPQLLHASVIGRAIHGRRGDTDIVIAGPG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC GRDATDAEMALVRSAVTAPSVKPEATSVSVLRATRRLYAVRGKLLLPAGPDAETVRLEAI CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHH TRITAAAAERTRIGAEVPAVFLSGRAYGLSIQRVDLSEPASDIPSAPYAIPVLGEVALTV HHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCCCHHHCCCCCEEEEEECCEEEEE EVAP EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA