Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is gpI
Identifier: 158423782
GI number: 158423782
Start: 2471932
End: 2472567
Strand: Direct
Name: gpI
Synonym: AZC_2158
Alternate gene names: NA
Gene position: 2471932-2472567 (Clockwise)
Preceding gene: 158423781
Following gene: 158423783
Centisome position: 46.03
GC content: 75.31
Gene sequence:
>636_bases ATGACGGATGCCGCCGACCTCCTGCCGGACAACGCCCGCCCGTTCGAGCAGGCGCTCGCCCATGCCATGACCGACACCCT GCCGGTGCCGATCGCGCAGACCCTCGATCCGTCCCGCGCTCCCGCCCGCTTCCTGCCCTGGCTCGCCGTCCATGACGGCG TGCGCCTGTGGTTCTCCGACTGGCCGGAGACCCGCCGCCGGCAGGTGATCGGCGAGGCCCCGCTTGCCGCCTGGCTGGTG GGCACGCGGCCCGGCGCCGTCACCTTCCTCGGCTATGTGGACGGCCTGCTGCTCGATGCGGTGGCCTATCCCACCCGCTT CGTCTTCGGCCGCGCCCGTGTCGGGCGCGCGCCCATCGGCCATCCGCCCTGGCTCGCCCGCTATCTGGTGCGCGTGCGCA CCCTGACGCCGCCCCGCGCCCTGGTGGGCGGGCGCACCGCCCTCGGCCGCAGCCGGCTCAGGACGCCGAGCCGCGAGCCC CGCCGCCGGTGCCTCGCCGCCCTCGTCGCCGCCAAGGCGCCGGAGACCGAGTACCGCGTCGATTTCGGCCATGCCCGCCC GCTGATGCTCGCCGATGGGCCACCGCTCGACGGCACCTTCCACCTCGGCGCCTACGTGGCGCGTCGCAAGCTCTGA
Upstream 100 bases:
>100_bases TCCAGCGCGTGGATCTGAGTGAGCCGGCGTCTGACATCCCTTCGGCGCCTTATGCGATCCCGGTGCTCGGTGAAGTGGCG CTCACCGTGGAGGTGGCGCC
Downstream 100 bases:
>100_bases AGGCTCCCCCCATGACCAGGATCGTCAGCTTCACCGAGGCCGAAGTCGCCGAGCCGCAGGATTTCGGCAACATCTCCCTC TATGCCCGCGAGGGCGACGA
Product: bacteriophage P2-related tail formation protein
Products: NA
Alternate protein names: Bacteriophage P2-Related Tail Formation Protein
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTDAADLLPDNARPFEQALAHAMTDTLPVPIAQTLDPSRAPARFLPWLAVHDGVRLWFSDWPETRRRQVIGEAPLAAWLV GTRPGAVTFLGYVDGLLLDAVAYPTRFVFGRARVGRAPIGHPPWLARYLVRVRTLTPPRALVGGRTALGRSRLRTPSREP RRRCLAALVAAKAPETEYRVDFGHARPLMLADGPPLDGTFHLGAYVARRKL
Sequences:
>Translated_211_residues MTDAADLLPDNARPFEQALAHAMTDTLPVPIAQTLDPSRAPARFLPWLAVHDGVRLWFSDWPETRRRQVIGEAPLAAWLV GTRPGAVTFLGYVDGLLLDAVAYPTRFVFGRARVGRAPIGHPPWLARYLVRVRTLTPPRALVGGRTALGRSRLRTPSREP RRRCLAALVAAKAPETEYRVDFGHARPLMLADGPPLDGTFHLGAYVARRKL >Mature_210_residues TDAADLLPDNARPFEQALAHAMTDTLPVPIAQTLDPSRAPARFLPWLAVHDGVRLWFSDWPETRRRQVIGEAPLAAWLVG TRPGAVTFLGYVDGLLLDAVAYPTRFVFGRARVGRAPIGHPPWLARYLVRVRTLTPPRALVGGRTALGRSRLRTPSREPR RRCLAALVAAKAPETEYRVDFGHARPLMLADGPPLDGTFHLGAYVARRKL
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23335; Mature: 23204
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAADLLPDNARPFEQALAHAMTDTLPVPIAQTLDPSRAPARFLPWLAVHDGVRLWFSD CCCCHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEEECC WPETRRRQVIGEAPLAAWLVGTRPGAVTFLGYVDGLLLDAVAYPTRFVFGRARVGRAPIG CCHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HPPWLARYLVRVRTLTPPRALVGGRTALGRSRLRTPSREPRRRCLAALVAAKAPETEYRV CCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEE DFGHARPLMLADGPPLDGTFHLGAYVARRKL ECCCCCEEEEECCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TDAADLLPDNARPFEQALAHAMTDTLPVPIAQTLDPSRAPARFLPWLAVHDGVRLWFSD CCCHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEEECC WPETRRRQVIGEAPLAAWLVGTRPGAVTFLGYVDGLLLDAVAYPTRFVFGRARVGRAPIG CCHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HPPWLARYLVRVRTLTPPRALVGGRTALGRSRLRTPSREPRRRCLAALVAAKAPETEYRV CCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEE DFGHARPLMLADGPPLDGTFHLGAYVARRKL ECCCCCEEEEECCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA