Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423768
Identifier: 158423768
GI number: 158423768
Start: 2461118
End: 2462350
Strand: Direct
Name: 158423768
Synonym: AZC_2144
Alternate gene names: NA
Gene position: 2461118-2462350 (Clockwise)
Preceding gene: 158423767
Following gene: 158423769
Centisome position: 45.83
GC content: 70.72
Gene sequence:
>1233_bases ATGGCGCAGAGGCAGACCGGCTTCGGCCCGCCGCCCGAGGTGGTGCGCTACTTCGACGACAAGGGCCTGAAGCCCGGTTT CCACTGGCAGGACGTCTGGCAGGAGGAGCACGCCCACGCCTTCACCGTGGCGAAGGCGGTGGAGACCGAGGTGCTCACCA CCTTCAAGGCCTCCATCGCGCGGGCGCAGAAGGAGGGCCTCGGCTTCGAGACCTGGCGCACGCGGGTGGTGGAGGATCTG AACCGCATCGGCTGGGGCGGGCCACGCCTGGTGGCGGACCCGGCCGGCGGCAAGCCGGATGCGGTGGTGGACTTCACCGC CCCGAACCGGCTGAAGACCATCTTCTGGGGCAACATGGCCTCGGCCCGCGCCGCCGGCCAGTGGGAGCGGGCGCAGCGCA CCAAAGCCGCGCTGCCCCATCTGCTCTATGTGCGCACCACGGCGGCCGACCCGCGCAAGGAGCACCTCGGCTGGGTGGGC ACCATCCTGCCCGTGGATGATCCCTTCTGGGCGAGCCACTTCCCGCCTAATGGCTGGCTGTGCAAATGCTCCGTCCGCCA GATCACCGCCCGCGAGCGGGATCGCCTACTGGCGCTGGAGCCCGCCGGTGGGAACGGCATCCGCTACTCGGCCGAGCGGC CGGTGATCGAGACGCGGGCCTTCACCAACAAGCGCTCGGGCGAGATCGTGGATGTGCCGGTGGGCATCGATCCCGGCTGG GGCGGCAATCCGGGCCTCGCGCGCGTGAAGGGCGTGCTGCGCGCCCTGGAGCAGTCCCTGGTGGAGGCGGAGCCGGCGGA CGCCACCCGCACCCTGGAGCAGCTCTGGGACAGCCCGTGGACGCGGGTGGTGAGCAGACTGCCGGAGGTTGAGGCGCGGC AGGTGTGGCTGCCGGCGGGCGTCGCGCCGAAGCTCCAGGCTGAGCTGGGGGCGAAGTCGCCGCTGGTCTCCATCAATGGC GCGGACGTGGTAGCGCGGGCCAACCACGACGGCCGGTACAAGGATGGCCGCAGCTATGAGGACCTGCGCCGTCTGCCGGC GGCGATCGCGGAGGGGACGGTGGTGCCGGACGCCAATCCCCGGCGGCGCGGCATGATATGGAACCTGGGCAAGGCCTGGT GGCGGGCTATCGTCACCAAGTCGGACACTGGCCTGATGCGGGTGATCTCCATGCACCCGCAGACAGGGGAAACTGCCCGC CGTTCGATCGTGGACAGCCAGACCCGAGAGTGA
Upstream 100 bases:
>100_bases CTGCTGAATGCCCGCGGCCCCGATGGCGCGCGGCTCGCCGAAGCACTGGCCGCCGCCACCTCCCTCGCGCGGGGCATCGG CGACGGGAAGGACTGATCTG
Downstream 100 bases:
>100_bases AAGGCGCGGAGGGGATGGACCGCTCCTCGGCCTGACCGCGCTCCATCTGGGGGCCAGCGACATTAAGATGCCGAGGCCAA CCGATTTCACCGCCACGCAA
Product: phage Mu protein F like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAQRQTGFGPPPEVVRYFDDKGLKPGFHWQDVWQEEHAHAFTVAKAVETEVLTTFKASIARAQKEGLGFETWRTRVVEDL NRIGWGGPRLVADPAGGKPDAVVDFTAPNRLKTIFWGNMASARAAGQWERAQRTKAALPHLLYVRTTAADPRKEHLGWVG TILPVDDPFWASHFPPNGWLCKCSVRQITARERDRLLALEPAGGNGIRYSAERPVIETRAFTNKRSGEIVDVPVGIDPGW GGNPGLARVKGVLRALEQSLVEAEPADATRTLEQLWDSPWTRVVSRLPEVEARQVWLPAGVAPKLQAELGAKSPLVSING ADVVARANHDGRYKDGRSYEDLRRLPAAIAEGTVVPDANPRRRGMIWNLGKAWWRAIVTKSDTGLMRVISMHPQTGETAR RSIVDSQTRE
Sequences:
>Translated_410_residues MAQRQTGFGPPPEVVRYFDDKGLKPGFHWQDVWQEEHAHAFTVAKAVETEVLTTFKASIARAQKEGLGFETWRTRVVEDL NRIGWGGPRLVADPAGGKPDAVVDFTAPNRLKTIFWGNMASARAAGQWERAQRTKAALPHLLYVRTTAADPRKEHLGWVG TILPVDDPFWASHFPPNGWLCKCSVRQITARERDRLLALEPAGGNGIRYSAERPVIETRAFTNKRSGEIVDVPVGIDPGW GGNPGLARVKGVLRALEQSLVEAEPADATRTLEQLWDSPWTRVVSRLPEVEARQVWLPAGVAPKLQAELGAKSPLVSING ADVVARANHDGRYKDGRSYEDLRRLPAAIAEGTVVPDANPRRRGMIWNLGKAWWRAIVTKSDTGLMRVISMHPQTGETAR RSIVDSQTRE >Mature_409_residues AQRQTGFGPPPEVVRYFDDKGLKPGFHWQDVWQEEHAHAFTVAKAVETEVLTTFKASIARAQKEGLGFETWRTRVVEDLN RIGWGGPRLVADPAGGKPDAVVDFTAPNRLKTIFWGNMASARAAGQWERAQRTKAALPHLLYVRTTAADPRKEHLGWVGT ILPVDDPFWASHFPPNGWLCKCSVRQITARERDRLLALEPAGGNGIRYSAERPVIETRAFTNKRSGEIVDVPVGIDPGWG GNPGLARVKGVLRALEQSLVEAEPADATRTLEQLWDSPWTRVVSRLPEVEARQVWLPAGVAPKLQAELGAKSPLVSINGA DVVARANHDGRYKDGRSYEDLRRLPAAIAEGTVVPDANPRRRGMIWNLGKAWWRAIVTKSDTGLMRVISMHPQTGETARR SIVDSQTRE
Specific function: Involved in virion morphogenesis [H]
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein F [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006528 [H]
Pfam domain/function: PF04233 Phage_Mu_F [H]
EC number: NA
Molecular weight: Translated: 45450; Mature: 45319
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRQTGFGPPPEVVRYFDDKGLKPGFHWQDVWQEEHAHAFTVAKAVETEVLTTFKASIA CCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQKEGLGFETWRTRVVEDLNRIGWGGPRLVADPAGGKPDAVVDFTAPNRLKTIFWGNMA HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCH SARAAGQWERAQRTKAALPHLLYVRTTAADPRKEHLGWVGTILPVDDPFWASHFPPNGWL HHHHCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCCCCCCCCCCCE CKCSVRQITARERDRLLALEPAGGNGIRYSAERPVIETRAFTNKRSGEIVDVPVGIDPGW EEEHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEHHHHHCCCCCCCEEEEECCCCCCC GGNPGLARVKGVLRALEQSLVEAEPADATRTLEQLWDSPWTRVVSRLPEVEARQVWLPAG CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCC VAPKLQAELGAKSPLVSINGADVVARANHDGRYKDGRSYEDLRRLPAAIAEGTVVPDANP CCHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC RRRGMIWNLGKAWWRAIVTKSDTGLMRVISMHPQTGETARRSIVDSQTRE CCCCCEEHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure AQRQTGFGPPPEVVRYFDDKGLKPGFHWQDVWQEEHAHAFTVAKAVETEVLTTFKASIA CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQKEGLGFETWRTRVVEDLNRIGWGGPRLVADPAGGKPDAVVDFTAPNRLKTIFWGNMA HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCH SARAAGQWERAQRTKAALPHLLYVRTTAADPRKEHLGWVGTILPVDDPFWASHFPPNGWL HHHHCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCCCCCCCCCCCE CKCSVRQITARERDRLLALEPAGGNGIRYSAERPVIETRAFTNKRSGEIVDVPVGIDPGW EEEHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEHHHHHCCCCCCCEEEEECCCCCCC GGNPGLARVKGVLRALEQSLVEAEPADATRTLEQLWDSPWTRVVSRLPEVEARQVWLPAG CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCC VAPKLQAELGAKSPLVSINGADVVARANHDGRYKDGRSYEDLRRLPAAIAEGTVVPDANP CCHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC RRRGMIWNLGKAWWRAIVTKSDTGLMRVISMHPQTGETARRSIVDSQTRE CCCCCEEHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]