Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423767
Identifier: 158423767
GI number: 158423767
Start: 2459530
End: 2461113
Strand: Direct
Name: 158423767
Synonym: AZC_2143
Alternate gene names: NA
Gene position: 2459530-2461113 (Clockwise)
Preceding gene: 158423766
Following gene: 158423768
Centisome position: 45.8
GC content: 70.39
Gene sequence:
>1584_bases GTGACCCCGCAGATCCTCGGGCCGGACGGGCGCCCGGTCTCCTCGCGCGCCCTGGACAAGGAGATCGCCACGCCCACCGT CTCCGGCGTGCGCCGGGTGGCGGAGGAGCGCGTCTCCTCCGGCCTCACGCCCGCCCGCCTCGCCAGCATCCTGCGGGATG CGCAGATGGGGCAGGCGCGTGCCTATCTGACGCTGGCCGAGGAGATGGAGGAGCGCTACCTGCATTATGCCTCCGTGCTG ATGACGCGGAAGCTGCGCATCGCCGGCATCCCGCCCACCATGGAGGTGCCCAAGGGCGTGCCGGCGAAGATCGCCGACGC CGTGGGCGAGCTGATCGAGGACACCGCCTTCCAGGAGGCGGCAGCCGCCCTGCTCGATGGCATTGGCAAGGGCTATTCGG TCGTGGAGACCGGCTGGGAGTATCGCGACCGCCTGCTGCGGCCCGTGACCTTCACCTGGCGCGATCCGCGCTTCTTCCAG TTCGATGCGCTCACTCTCACGCAGCTGCGGCTTGCGGTCGACGGCGTGGTGGAGGGCGAGGAGCTGCCCAAGGCCCGCTT CATGGTGCACATGCCGGCGCCGCGCATGGGCCTGCCCATCCGGCGGGGCCTCGCCCGGCCGGCGAGCTGGGCCTATATGG TGCAGAGCTTCACGCTGCAGGACTGGTCGGCCTTCGCCGAGGTCTATGGCATCCCGTTCCGCGTCGGCAAATACGGCCCC GGCGCCAGCGAGGTGGACAAGCGCAAGCTGCTGCGGGCGGTGACCTCCATCGCCAATGACGCGGCGGCGATCATCCCGGA GTCCATGCTCATCGAGTTCCACGAGGTGAACGGCGCCCGTGGCGAGCAGGTGTTCGGCAGCCTGATCGATTACACCGACG ACAAGGTCTCGCTGGTGACGCTCGGCCAGACCATGACGTCCAAGGACGGCTCGTCCTACGGCCAGGCGAAGATCCACGAC AAGGTGCGCATCGACATCGCCCAGGCGGACGGGCGCCAGCTGGGCCAGACGGTGAACCGGGACCTGATCCAGTGGTTCGT GGCCATGAACTTCGGGCCGCAGGCGCTCTATCCCAAGGTGGAGTGGCCGGTGACGGAGCCGGAGGACATCGCGGCTCTGG CCGATGCAGTCTCGCGCCTGGTGCCCGTGGGGCTGAAGGTGAGCCAGCGGGAGATCCGCGACCGCATGGGCCTCTCGGAG CCGCAGGCGGATGAGGAGCTGTTGCAGGCGGCGACACCGGCGCAAGGGCCCGCCGAGCCGCCGCCCGAGCCCAGGGCCAA TCGCCTGTCCGCCCATCCCGTCACCTGCGGCTGTTCCTCCTGCGCCCCGGCGCTTCTATCTGCTCCTGCCGCCGAGCCCG ATGGCGTGGCCGAGACCGATGCCGCCTTCGCCGCCGCGCTGGAGGACTGGCAGGACATCACCGATCCGCTGCTCGATCCG CTGCGCCAGGTGCTGGCCACCGCCACGTCCTTTGATGAGGCGCTGGCGCTGCTGAATGCCCGCGGCCCCGATGGCGCGCG GCTCGCCGAAGCACTGGCCGCCGCCACCTCCCTCGCGCGGGGCATCGGCGACGGGAAGGACTGA
Upstream 100 bases:
>100_bases CCCGCATTTCCGTCCTCGAATACGACTACCAGACCGGCTCCGACCTGGACGCCGTGGCGGCAGGCGACGAGGACGACACC TCCGGAGGCCGCGCCTTATG
Downstream 100 bases:
>100_bases TCTGATGGCGCAGAGGCAGACCGGCTTCGGCCCGCCGCCCGAGGTGGTGCGCTACTTCGACGACAAGGGCCTGAAGCCCG GTTTCCACTGGCAGGACGTC
Product: Mu-like prophage protein gp29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MTPQILGPDGRPVSSRALDKEIATPTVSGVRRVAEERVSSGLTPARLASILRDAQMGQARAYLTLAEEMEERYLHYASVL MTRKLRIAGIPPTMEVPKGVPAKIADAVGELIEDTAFQEAAAALLDGIGKGYSVVETGWEYRDRLLRPVTFTWRDPRFFQ FDALTLTQLRLAVDGVVEGEELPKARFMVHMPAPRMGLPIRRGLARPASWAYMVQSFTLQDWSAFAEVYGIPFRVGKYGP GASEVDKRKLLRAVTSIANDAAAIIPESMLIEFHEVNGARGEQVFGSLIDYTDDKVSLVTLGQTMTSKDGSSYGQAKIHD KVRIDIAQADGRQLGQTVNRDLIQWFVAMNFGPQALYPKVEWPVTEPEDIAALADAVSRLVPVGLKVSQREIRDRMGLSE PQADEELLQAATPAQGPAEPPPEPRANRLSAHPVTCGCSSCAPALLSAPAAEPDGVAETDAAFAAALEDWQDITDPLLDP LRQVLATATSFDEALALLNARGPDGARLAEALAAATSLARGIGDGKD
Sequences:
>Translated_527_residues MTPQILGPDGRPVSSRALDKEIATPTVSGVRRVAEERVSSGLTPARLASILRDAQMGQARAYLTLAEEMEERYLHYASVL MTRKLRIAGIPPTMEVPKGVPAKIADAVGELIEDTAFQEAAAALLDGIGKGYSVVETGWEYRDRLLRPVTFTWRDPRFFQ FDALTLTQLRLAVDGVVEGEELPKARFMVHMPAPRMGLPIRRGLARPASWAYMVQSFTLQDWSAFAEVYGIPFRVGKYGP GASEVDKRKLLRAVTSIANDAAAIIPESMLIEFHEVNGARGEQVFGSLIDYTDDKVSLVTLGQTMTSKDGSSYGQAKIHD KVRIDIAQADGRQLGQTVNRDLIQWFVAMNFGPQALYPKVEWPVTEPEDIAALADAVSRLVPVGLKVSQREIRDRMGLSE PQADEELLQAATPAQGPAEPPPEPRANRLSAHPVTCGCSSCAPALLSAPAAEPDGVAETDAAFAAALEDWQDITDPLLDP LRQVLATATSFDEALALLNARGPDGARLAEALAAATSLARGIGDGKD >Mature_526_residues TPQILGPDGRPVSSRALDKEIATPTVSGVRRVAEERVSSGLTPARLASILRDAQMGQARAYLTLAEEMEERYLHYASVLM TRKLRIAGIPPTMEVPKGVPAKIADAVGELIEDTAFQEAAAALLDGIGKGYSVVETGWEYRDRLLRPVTFTWRDPRFFQF DALTLTQLRLAVDGVVEGEELPKARFMVHMPAPRMGLPIRRGLARPASWAYMVQSFTLQDWSAFAEVYGIPFRVGKYGPG ASEVDKRKLLRAVTSIANDAAAIIPESMLIEFHEVNGARGEQVFGSLIDYTDDKVSLVTLGQTMTSKDGSSYGQAKIHDK VRIDIAQADGRQLGQTVNRDLIQWFVAMNFGPQALYPKVEWPVTEPEDIAALADAVSRLVPVGLKVSQREIRDRMGLSEP QADEELLQAATPAQGPAEPPPEPRANRLSAHPVTCGCSSCAPALLSAPAAEPDGVAETDAAFAAALEDWQDITDPLLDPL RQVLATATSFDEALALLNARGPDGARLAEALAAATSLARGIGDGKD
Specific function: Unknown
COG id: COG4383
COG function: function code S; Mu-like prophage protein gp29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp29 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009279 [H]
Pfam domain/function: PF06074 DUF935 [H]
EC number: NA
Molecular weight: Translated: 56946; Mature: 56815
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQILGPDGRPVSSRALDKEIATPTVSGVRRVAEERVSSGLTPARLASILRDAQMGQAR CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHH AYLTLAEEMEERYLHYASVLMTRKLRIAGIPPTMEVPKGVPAKIADAVGELIEDTAFQEA HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AAALLDGIGKGYSVVETGWEYRDRLLRPVTFTWRDPRFFQFDALTLTQLRLAVDGVVEGE HHHHHHHCCCCCHHHHCCHHHHHHHHCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCC ELPKARFMVHMPAPRMGLPIRRGLARPASWAYMVQSFTLQDWSAFAEVYGIPFRVGKYGP CCCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC GASEVDKRKLLRAVTSIANDAAAIIPESMLIEFHEVNGARGEQVFGSLIDYTDDKVSLVT CHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEE LGQTMTSKDGSSYGQAKIHDKVRIDIAQADGRQLGQTVNRDLIQWFVAMNFGPQALYPKV ECCHHHCCCCCCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCC EWPVTEPEDIAALADAVSRLVPVGLKVSQREIRDRMGLSEPQADEELLQAATPAQGPAEP CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC PPEPRANRLSAHPVTCGCSSCAPALLSAPAAEPDGVAETDAAFAAALEDWQDITDPLLDP CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRQVLATATSFDEALALLNARGPDGARLAEALAAATSLARGIGDGKD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPQILGPDGRPVSSRALDKEIATPTVSGVRRVAEERVSSGLTPARLASILRDAQMGQAR CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHH AYLTLAEEMEERYLHYASVLMTRKLRIAGIPPTMEVPKGVPAKIADAVGELIEDTAFQEA HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AAALLDGIGKGYSVVETGWEYRDRLLRPVTFTWRDPRFFQFDALTLTQLRLAVDGVVEGE HHHHHHHCCCCCHHHHCCHHHHHHHHCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCC ELPKARFMVHMPAPRMGLPIRRGLARPASWAYMVQSFTLQDWSAFAEVYGIPFRVGKYGP CCCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC GASEVDKRKLLRAVTSIANDAAAIIPESMLIEFHEVNGARGEQVFGSLIDYTDDKVSLVT CHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEE LGQTMTSKDGSSYGQAKIHDKVRIDIAQADGRQLGQTVNRDLIQWFVAMNFGPQALYPKV ECCHHHCCCCCCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCC EWPVTEPEDIAALADAVSRLVPVGLKVSQREIRDRMGLSEPQADEELLQAATPAQGPAEP CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC PPEPRANRLSAHPVTCGCSSCAPALLSAPAAEPDGVAETDAAFAAALEDWQDITDPLLDP CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRQVLATATSFDEALALLNARGPDGARLAEALAAATSLARGIGDGKD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]