Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423746
Identifier: 158423746
GI number: 158423746
Start: 2440727
End: 2441113
Strand: Direct
Name: 158423746
Synonym: AZC_2122
Alternate gene names: NA
Gene position: 2440727-2441113 (Clockwise)
Preceding gene: 158423745
Following gene: 158423747
Centisome position: 45.45
GC content: 68.22
Gene sequence:
>387_bases ATGGGCAAGCCGTTATCGATGGACCTGCGCGAGCGAGTTGTTGGTGCCATTTCGCAGGGCATGTCGCGCCGGGCGGCCGC GGCGCGGTTTGGGGTCAGCGCAGCCAGTGCAGTGAGGTGGGCGGCACTTCAGCGCGATCAGGGAAAGCCAGCGGCCAAGC CACAGGGCGGTGACACGCGCTCGGCCACGACCGAGGCCAAGGCGGCGCGCATCTGGGCGCTGTACGAGGCGGCTCCGGAC ATCACTCTTGCCGAGCTGCGCGAGGGGCTGGCCGCCGAAGGGATCGCGGTTGCAGTATCGACCCTGTGGCGCTTTTTCGC CCGCCACGGGCATACGCGCAAAAAAAGACCGGCCATGCGAGCGAGCAGGACCGCCCCGACATCCTGA
Upstream 100 bases:
>100_bases GTAGACTAGAGCAAAATCCGATCAGCGTGAATCGCTGAGGGATTCCCAAAGGGAGTGAAGTCTGATTCATGCTCGTTTCC GGCGAGGGGAGGCCGGTCAG
Downstream 100 bases:
>100_bases GCGCGCGTGAAGCCTGGTTCGATGGTCAGCTCGACCTCGATCCGGAAACGCTGATCTTCGTCGATGAGACAGGTGCCAGT ACGAAGATGGCACGCCGCTA
Product: transposase
Products: NA
Alternate protein names: ISSpo6 Transposase Orf A; Transposase And Inactivated Derivatives-Like Protein
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MGKPLSMDLRERVVGAISQGMSRRAAAARFGVSAASAVRWAALQRDQGKPAAKPQGGDTRSATTEAKAARIWALYEAAPD ITLAELREGLAAEGIAVAVSTLWRFFARHGHTRKKRPAMRASRTAPTS
Sequences:
>Translated_128_residues MGKPLSMDLRERVVGAISQGMSRRAAAARFGVSAASAVRWAALQRDQGKPAAKPQGGDTRSATTEAKAARIWALYEAAPD ITLAELREGLAAEGIAVAVSTLWRFFARHGHTRKKRPAMRASRTAPTS >Mature_127_residues GKPLSMDLRERVVGAISQGMSRRAAAARFGVSAASAVRWAALQRDQGKPAAKPQGGDTRSATTEAKAARIWALYEAAPDI TLAELREGLAAEGIAVAVSTLWRFFARHGHTRKKRPAMRASRTAPTS
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13685; Mature: 13554
Theoretical pI: Translated: 12.07; Mature: 12.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKPLSMDLRERVVGAISQGMSRRAAAARFGVSAASAVRWAALQRDQGKPAAKPQGGDTR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SATTEAKAARIWALYEAAPDITLAELREGLAAEGIAVAVSTLWRFFARHGHTRKKRPAMR CHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH ASRTAPTS HCCCCCCC >Mature Secondary Structure GKPLSMDLRERVVGAISQGMSRRAAAARFGVSAASAVRWAALQRDQGKPAAKPQGGDTR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SATTEAKAARIWALYEAAPDITLAELREGLAAEGIAVAVSTLWRFFARHGHTRKKRPAMR CHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH ASRTAPTS HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA