Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423747
Identifier: 158423747
GI number: 158423747
Start: 2441200
End: 2441673
Strand: Direct
Name: 158423747
Synonym: AZC_2123
Alternate gene names: NA
Gene position: 2441200-2441673 (Clockwise)
Preceding gene: 158423746
Following gene: 158423749
Centisome position: 45.46
GC content: 65.61
Gene sequence:
>474_bases ATGGCACGCCGCTATGGACGCGCTCCACGCGGCGAACGGCTGCGCATGGCTGTACCGCACGGACACTGGATGACGACCAC GTTCGTCGGGGCTTTGCGGCTCTCGGGCATGACCGCACCGCTCGTCATCGACGGACCGATGACCGGGGCGTGGTTCGAGG CCTGGGTTGCCCGGGTACTCGCTCCGACGCTGAAACGGGGCGACGTTGTGATCCTGGACAACCTGCCCGCCCACAAAAGC GTCGTGGCGCGGGAGGCGATCGAGGCAAGGGGCGCCCGGCTGCTCTTCCTTCCGCCTTACTCGCCCGACTTCAATCCGAT CGAAAACGCCTTCGCCAAGCTGAAAGCACTCCTGCGCAAAGCCGCTGCACGCACCGTCGACGATCTGTCCCGCGCCATCG GTGCCGCCATCGACACCTTCACGCCCGCCGAATGCGCCAACTACTTCGCCGCTGCCGGATACGATGCATATTGA
Upstream 100 bases:
>100_bases CCCCGACATCCTGAGCGCGCGTGAAGCCTGGTTCGATGGTCAGCTCGACCTCGATCCGGAAACGCTGATCTTCGTCGATG AGACAGGTGCCAGTACGAAG
Downstream 100 bases:
>100_bases TCGGAATCTGCTCTAGGCTGTGAGCCCTTGCAGCTTGAGCTTTGCCGCAACTGCGAGGTTGCGCCGAAAAACATTGCTGG CGCATCAAGGCCTTAGCGGC
Product: transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Transposase Family Protein; Transposase IS; ISSoc4 Transposase OrfAB; Transposase Fragment
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MARRYGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKS VVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY
Sequences:
>Translated_157_residues MARRYGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKS VVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY >Mature_156_residues ARRYGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKSV VAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17112; Mature: 16981
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRYGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVL CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH APTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRK HHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH AAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure ARRYGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVL CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH APTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRK HHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH AAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA