Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is sbp [C]
Identifier: 158423718
GI number: 158423718
Start: 2407592
End: 2408674
Strand: Direct
Name: sbp [C]
Synonym: AZC_2094
Alternate gene names: 158423718
Gene position: 2407592-2408674 (Clockwise)
Preceding gene: 158423717
Following gene: 158423719
Centisome position: 44.84
GC content: 64.73
Gene sequence:
>1083_bases ATGACGCATTGGCTGATCAAGGCCGCCACCGCGGTCGCTCTGGCGCTGCCCGCCGCAGCGCTGCCCACCCTCGCCATGGC CCTCGACGGGCCGGAGCTTTTCCCCGGCGAGGCCGCCCTCTATGAGGCGGCGAAGAAGGAGGGGATGGTCGTCTCCTTCG ACACCGGCCCCACCTGGGCGAACTGGGGCGAGCAGTTCAAGGCGTTCCAGAAGCGCTATCCGGGTGTCGAGATCGTCTAT AACGACATCGGCTCAGCCCAGACGGTGGTGGCGCTCGACAAGTCGCGCAACCGGCCGCAGGCGGACACCGCCTATTATTT TGCGGGCTCCGCGCTGGACGCCGCCGCGAAAGACGTGGTGGCGCCGTTCCAGCCGGTGAACTTCGACAAGCTGGTGCCCG AGTTCAAGCAGGCGGACGGCAAGTGGTTCACCATCCACACGCTGAGCCCCGCCTTCCTCGTAAACAAGAACCTCGTGAAG ACCCCGCCCAAGAGCTGGGCCGACCTTCTGAACGCCGATTACAAGAACGCGGTTGTCTATCTTGACCCGCGCTCGACCGG GCAGGGGCAGGTGGTGGCGATTGCCGCCGCTTATGCCAATGGCGGCAGCATCGACAATGTGAAGCCGGGCATCGACTATC TCGAAAAGCTGCACAAGGCTGGCAACGTGCTGCGTACGGTCGGCACCACGCCTTATGCGCAGTTCCTCAAGGGCGAGATC CCGATCCTCATCGGCTATGAGAACGATGGCCTGAAGGCCAAGTACAAGGATGGCATGGGTGATGCCGTGGAGGTGGTGAT CCCCTCCGAGGGCACCGTTGCCGCGCCTTATGCCATCAGCCTCGTGAAAGGCGGCCCGAACCCCAACGCCGGCAAGCTGT GGCTCAATTTCATCATGAGCGCCGACGGTCAGGCCCGTTTTGCGGAAGGCTATGTGCGCCCCGCCGTGCCCGGTATCGAA CTGCCGGCCTCGGTGGCCGCCCAGATGCCCGCCATCAAGGCGACGCCGCTCGATGTGGCCAAGGCCAGCGCCAAGAAGGC CGAGATCGACCAGCTCTGGGCCAAGCAGGTGCTCGGCCAGTGA
Upstream 100 bases:
>100_bases GCGCCGCCATCGCGGCGGTCGCGGTGCCGCCGGACGCGATCCGGCTGCTGCCTCCCGAGAGCCCGTCCCCAACCCGGCCT GCCCACACAGGAAACCCGTC
Downstream 100 bases:
>100_bases GGTGAGCCGAAGGGCCGGCGTCGCGCCGGCCCTTCTCCCGTTTTCGACAGATGGCGCCGCACGAAGGCACGAGATCCATG GCACAGAGCGCAAAGCAGGG
Product: ABC transporter substrate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTHWLIKAATAVALALPAAALPTLAMALDGPELFPGEAALYEAAKKEGMVVSFDTGPTWANWGEQFKAFQKRYPGVEIVY NDIGSAQTVVALDKSRNRPQADTAYYFAGSALDAAAKDVVAPFQPVNFDKLVPEFKQADGKWFTIHTLSPAFLVNKNLVK TPPKSWADLLNADYKNAVVYLDPRSTGQGQVVAIAAAYANGGSIDNVKPGIDYLEKLHKAGNVLRTVGTTPYAQFLKGEI PILIGYENDGLKAKYKDGMGDAVEVVIPSEGTVAAPYAISLVKGGPNPNAGKLWLNFIMSADGQARFAEGYVRPAVPGIE LPASVAAQMPAIKATPLDVAKASAKKAEIDQLWAKQVLGQ
Sequences:
>Translated_360_residues MTHWLIKAATAVALALPAAALPTLAMALDGPELFPGEAALYEAAKKEGMVVSFDTGPTWANWGEQFKAFQKRYPGVEIVY NDIGSAQTVVALDKSRNRPQADTAYYFAGSALDAAAKDVVAPFQPVNFDKLVPEFKQADGKWFTIHTLSPAFLVNKNLVK TPPKSWADLLNADYKNAVVYLDPRSTGQGQVVAIAAAYANGGSIDNVKPGIDYLEKLHKAGNVLRTVGTTPYAQFLKGEI PILIGYENDGLKAKYKDGMGDAVEVVIPSEGTVAAPYAISLVKGGPNPNAGKLWLNFIMSADGQARFAEGYVRPAVPGIE LPASVAAQMPAIKATPLDVAKASAKKAEIDQLWAKQVLGQ >Mature_359_residues THWLIKAATAVALALPAAALPTLAMALDGPELFPGEAALYEAAKKEGMVVSFDTGPTWANWGEQFKAFQKRYPGVEIVYN DIGSAQTVVALDKSRNRPQADTAYYFAGSALDAAAKDVVAPFQPVNFDKLVPEFKQADGKWFTIHTLSPAFLVNKNLVKT PPKSWADLLNADYKNAVVYLDPRSTGQGQVVAIAAAYANGGSIDNVKPGIDYLEKLHKAGNVLRTVGTTPYAQFLKGEIP ILIGYENDGLKAKYKDGMGDAVEVVIPSEGTVAAPYAISLVKGGPNPNAGKLWLNFIMSADGQARFAEGYVRPAVPGIEL PASVAAQMPAIKATPLDVAKASAKKAEIDQLWAKQVLGQ
Specific function: This Protein Specifically Binds Sulfate And Is Involved In Its Transmembrane Transport. [C]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38375; Mature: 38244
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHWLIKAATAVALALPAAALPTLAMALDGPELFPGEAALYEAAKKEGMVVSFDTGPTWA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCHH NWGEQFKAFQKRYPGVEIVYNDIGSAQTVVALDKSRNRPQADTAYYFAGSALDAAAKDVV HHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHC APFQPVNFDKLVPEFKQADGKWFTIHTLSPAFLVNKNLVKTPPKSWADLLNADYKNAVVY CCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHEECCCCCCCCCHHHHHHHCCCCCCEEEE LDPRSTGQGQVVAIAAAYANGGSIDNVKPGIDYLEKLHKAGNVLRTVGTTPYAQFLKGEI ECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCHHHHHHCCCC PILIGYENDGLKAKYKDGMGDAVEVVIPSEGTVAAPYAISLVKGGPNPNAGKLWLNFIMS CEEEEECCCCCCEEECCCCCCEEEEEECCCCCEECCEEEEEEECCCCCCHHHHHEEHHHC ADGQARFAEGYVRPAVPGIELPASVAAQMPAIKATPLDVAKASAKKAEIDQLWAKQVLGQ CCCCCCHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THWLIKAATAVALALPAAALPTLAMALDGPELFPGEAALYEAAKKEGMVVSFDTGPTWA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCHH NWGEQFKAFQKRYPGVEIVYNDIGSAQTVVALDKSRNRPQADTAYYFAGSALDAAAKDVV HHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHC APFQPVNFDKLVPEFKQADGKWFTIHTLSPAFLVNKNLVKTPPKSWADLLNADYKNAVVY CCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHEECCCCCCCCCHHHHHHHCCCCCCEEEE LDPRSTGQGQVVAIAAAYANGGSIDNVKPGIDYLEKLHKAGNVLRTVGTTPYAQFLKGEI ECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCHHHHHHCCCC PILIGYENDGLKAKYKDGMGDAVEVVIPSEGTVAAPYAISLVKGGPNPNAGKLWLNFIMS CEEEEECCCCCCEEECCCCCCEEEEEECCCCCEECCEEEEEEECCCCCCHHHHHEEHHHC ADGQARFAEGYVRPAVPGIELPASVAAQMPAIKATPLDVAKASAKKAEIDQLWAKQVLGQ CCCCCCHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]