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The map label for this gene is pdxJ [H]

Identifier: 158423625

GI number: 158423625

Start: 2308344

End: 2309105

Strand: Direct

Name: pdxJ [H]

Synonym: AZC_2001

Alternate gene names: 158423625

Gene position: 2308344-2309105 (Clockwise)

Preceding gene: 158423624

Following gene: 158423626

Centisome position: 42.99

GC content: 70.08

Gene sequence:

>762_bases
ATGACCGCCCCCATCCGGCTCGGATTGAACGTGGACCACGTGGCCACCGTGCGGAACGCCCGCGGTGGCCTCAATCCTGA
CCCGGTGCGTGCGGCCCTGCTTGCCGCCGAGGCGGGCGTCGACGGCATCACGGCGCACCTGCGCGAGGATCGCCGCCACA
TCCGCGACGCGGACATCGCCCGCATCCGCTCCGAAGTCGCGCTGCCGCTGAACTTCGAGATGGCGGCCACCGACGAGATG
ATCGCCATCGCCCTCTCCGTCAAGCCGCACGCCTGCTGCCTCGTGCCGGAGCGCCGCGAGGAGCGCACCACCGAGGGCGG
TCTCGATGTTGCCGGGCAGGCGGCGGACCTCAAGCCCAGGATCGCGGCCTTGAACGCCGCCGGCATCCGCGTCTCGCTCT
TCATTGCTGCCGATCCGGTGCAGATCGCCGCCGCCCGTGCGCTTCAGGCCTCCGTCATCGAACTGCATACGGGCGCATGG
TGCGAGGCGCTGGCGGCCGGGCATCTGGCCGAGGCGTCCGCCGAGTTCGAGCGCCTGCGCACCGGCGCCCGCGAGGCGGC
AGCGCTGGGCCTTGAGGTCCACGCCGGCCATGGGCTCGATTATGAAACCGCCGAGCAGATCGCCGCGTTGCCTGAGATCG
CGGAACTGAACATCGGTCATTTCATGATTGGCGAAGCCATTTTCGAGGGTCTGCCGGGGGTGGTCAGCCTCATGCGGGAA
GCCATGGCCCGCGGCCAGGACCGGCGGGAGCTTGCCGCATGA

Upstream 100 bases:

>100_bases
TGTGTCGAGCGCCGAGCGCGTCAATGGGTGACGGCCCGGCCCCGAGGCCTTAAATCCTCCGGCCGGTGTTCTCCGGCATC
ATCCTTCAGGAGCTGACACG

Downstream 100 bases:

>100_bases
TTCTCGGCATCGGCTCCGATTTCTGCGACGCCCGACGTATCGAGAAGTCCATCGAGCGGTTCGGCGCCCGCTTCACCGAG
CGCGTCTTCACGCCGCTCGA

Product: pyridoxine 5'-phosphate synthase

Products: NA

Alternate protein names: PNP synthase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTAPIRLGLNVDHVATVRNARGGLNPDPVRAALLAAEAGVDGITAHLREDRRHIRDADIARIRSEVALPLNFEMAATDEM
IAIALSVKPHACCLVPERREERTTEGGLDVAGQAADLKPRIAALNAAGIRVSLFIAADPVQIAAARALQASVIELHTGAW
CEALAAGHLAEASAEFERLRTGAREAAALGLEVHAGHGLDYETAEQIAALPEIAELNIGHFMIGEAIFEGLPGVVSLMRE
AMARGQDRRELAA

Sequences:

>Translated_253_residues
MTAPIRLGLNVDHVATVRNARGGLNPDPVRAALLAAEAGVDGITAHLREDRRHIRDADIARIRSEVALPLNFEMAATDEM
IAIALSVKPHACCLVPERREERTTEGGLDVAGQAADLKPRIAALNAAGIRVSLFIAADPVQIAAARALQASVIELHTGAW
CEALAAGHLAEASAEFERLRTGAREAAALGLEVHAGHGLDYETAEQIAALPEIAELNIGHFMIGEAIFEGLPGVVSLMRE
AMARGQDRRELAA
>Mature_252_residues
TAPIRLGLNVDHVATVRNARGGLNPDPVRAALLAAEAGVDGITAHLREDRRHIRDADIARIRSEVALPLNFEMAATDEMI
AIALSVKPHACCLVPERREERTTEGGLDVAGQAADLKPRIAALNAAGIRVSLFIAADPVQIAAARALQASVIELHTGAWC
EALAAGHLAEASAEFERLRTGAREAAALGLEVHAGHGLDYETAEQIAALPEIAELNIGHFMIGEAIFEGLPGVVSLMREA
MARGQDRRELAA

Specific function: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate [H]

COG id: COG0854

COG function: function code H; Pyridoxal phosphate biosynthesis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788917, Length=245, Percent_Identity=53.469387755102, Blast_Score=244, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR004569 [H]

Pfam domain/function: PF03740 PdxJ [H]

EC number: =2.6.99.2 [H]

Molecular weight: Translated: 26795; Mature: 26664

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPIRLGLNVDHVATVRNARGGLNPDPVRAALLAAEAGVDGITAHLREDRRHIRDADIA
CCCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHH
RIRSEVALPLNFEMAATDEMIAIALSVKPHACCLVPERREERTTEGGLDVAGQAADLKPR
HHHHHHCCCCCCEEECCCCEEEEEEECCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCH
IAALNAAGIRVSLFIAADPVQIAAARALQASVIELHTGAWCEALAAGHLAEASAEFERLR
HEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TGAREAAALGLEVHAGHGLDYETAEQIAALPEIAELNIGHFMIGEAIFEGLPGVVSLMRE
HCHHHHHHCCEEEECCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
AMARGQDRRELAA
HHHCCCCHHHHCC
>Mature Secondary Structure 
TAPIRLGLNVDHVATVRNARGGLNPDPVRAALLAAEAGVDGITAHLREDRRHIRDADIA
CCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHH
RIRSEVALPLNFEMAATDEMIAIALSVKPHACCLVPERREERTTEGGLDVAGQAADLKPR
HHHHHHCCCCCCEEECCCCEEEEEEECCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCH
IAALNAAGIRVSLFIAADPVQIAAARALQASVIELHTGAWCEALAAGHLAEASAEFERLR
HEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TGAREAAALGLEVHAGHGLDYETAEQIAALPEIAELNIGHFMIGEAIFEGLPGVVSLMRE
HCHHHHHHCCEEEECCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
AMARGQDRRELAA
HHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA