Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423605
Identifier: 158423605
GI number: 158423605
Start: 2284546
End: 2285001
Strand: Direct
Name: 158423605
Synonym: AZC_1981
Alternate gene names: NA
Gene position: 2284546-2285001 (Clockwise)
Preceding gene: 158423604
Following gene: 158423611
Centisome position: 42.54
GC content: 62.94
Gene sequence:
>456_bases TTGAGCCTAGACCCCCAGAATAGCGCCACGCTTGAGCTGGTTGCTGATATCGTCACCGCCTATGTGGGCAACAACACTGT CGCACAGAGCGATCTGTCCGACCTGATCGTAAAAGTCCACGCTGCGCTGCGCGGACTGAGCGGAAATACTGCGGAAGCCG CACCCGTCGAAGAGCTTAAGCCCGCCGTGCCCGTGAAGAAGTCCGTAACCCCGGACTATATCATCTGTCTGGAAGACGGC CGTCAGTTCAAGTCGCTGAAGCGTCACCTCCAGTCTGCTTACGGCCTGACGCCGGATGCGTATCGCGCCAAGTGGAACCT TCCGCGCGACTATCCGATGGTGGCTCCCAATTACGCGGCGGCTCGCTCCGAACTCGCCCGGAGCCTCGGCCTCGGCCGCA AGCCCGCGCCCGAGCCGGCCAAGAAGGCCGCTCCCGCCCGTCGCAAGAAGGCCTGA
Upstream 100 bases:
>100_bases GAAAAGTGCCGTATTAAGGGGCTGTTCCGGAATCACGCCGCTTGCGGGGCACACGGGGGAGCGCGGCGTCAGACAATCAA ACCGACAACGGGAGAGCCTG
Downstream 100 bases:
>100_bases GTTCGCGCGACGCCGGCGTGCCTCACTTGGAGGCGCGCTCGGCCCGAGCAGCCCTCATGGAATCACCCGGCAGGTCCGCC GACCTGTCGGGTGTTCGCGT
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSLDPQNSATLELVADIVTAYVGNNTVAQSDLSDLIVKVHAALRGLSGNTAEAAPVEELKPAVPVKKSVTPDYIICLEDG RQFKSLKRHLQSAYGLTPDAYRAKWNLPRDYPMVAPNYAAARSELARSLGLGRKPAPEPAKKAAPARRKKA
Sequences:
>Translated_151_residues MSLDPQNSATLELVADIVTAYVGNNTVAQSDLSDLIVKVHAALRGLSGNTAEAAPVEELKPAVPVKKSVTPDYIICLEDG RQFKSLKRHLQSAYGLTPDAYRAKWNLPRDYPMVAPNYAAARSELARSLGLGRKPAPEPAKKAAPARRKKA >Mature_150_residues SLDPQNSATLELVADIVTAYVGNNTVAQSDLSDLIVKVHAALRGLSGNTAEAAPVEELKPAVPVKKSVTPDYIICLEDGR QFKSLKRHLQSAYGLTPDAYRAKWNLPRDYPMVAPNYAAARSELARSLGLGRKPAPEPAKKAAPARRKKA
Specific function: Unknown
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 16291; Mature: 16160
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDPQNSATLELVADIVTAYVGNNTVAQSDLSDLIVKVHAALRGLSGNTAEAAPVEELK CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHC PAVPVKKSVTPDYIICLEDGRQFKSLKRHLQSAYGLTPDAYRAKWNLPRDYPMVAPNYAA CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHH ARSELARSLGLGRKPAPEPAKKAAPARRKKA HHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure SLDPQNSATLELVADIVTAYVGNNTVAQSDLSDLIVKVHAALRGLSGNTAEAAPVEELK CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHC PAVPVKKSVTPDYIICLEDGRQFKSLKRHLQSAYGLTPDAYRAKWNLPRDYPMVAPNYAA CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHH ARSELARSLGLGRKPAPEPAKKAAPARRKKA HHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]