Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423603
Identifier: 158423603
GI number: 158423603
Start: 2282172
End: 2283242
Strand: Direct
Name: 158423603
Synonym: AZC_1979
Alternate gene names: NA
Gene position: 2282172-2283242 (Clockwise)
Preceding gene: 158423602
Following gene: 158423604
Centisome position: 42.5
GC content: 63.31
Gene sequence:
>1071_bases ATGATCACACGCAGACAGTGGCTCCAGGCGAGCGGGGCGTTTGCCGCGGCGCTGGCGCTCGGCCCGCGCGCCCTCGTGGC GCAGCCGATGAAGACGGTGAAGGTCGGCGTCGGCCTCAAGTCCATCAATGCCAGCGTCATCAACCTGCTCATCGGCGAGG CGCTCGGCTACAATGCCGAGGAGGGCTTCAAGGTTCAGGGCATGGCGCTTGGCGGCAATGCCAACGTGCAGGTGGCCACC AACAAGGGCGATGTCGATGTGGGCATCGGCGTGCCGTCCTATGCCCTGCCTATCCTGGCGAAGGGCGAATGGGGCAACGC GCTCTGGTTCTACCAGTACACCTATCCCTACAAGTGGGACGTGGCGGTGAAGCCGGGCTCGACCATCAAGAGCTACACCG ACCTCAAGGGCAAGAATATCGGCGTCTCCGACTTCGGCGGCACGGAATATCCGGTCACCCGCAACGTGCTGAAGCAGCTC GGCATCGATCCGGACAAGGATGTGAAATGGACGGCGGTGGGCGCAGGCGTGCCTGCCGGTGTCGCGCTCCAGAGGGGCGC CATCGACGCGCTCGCTTATTATGACACGGGCTTCGGCATCATCGACGGTGCCGGCATTCCCATGGAGCTGGTGCAGCGGC CGAACAATCTGCCGATGATCGGCGGCCAGTTCCTCATGGGCCTGCGCGAGCGCATCAAGGCCGAGCGCGAACTCTTCGTC GGCTTCGGTCGCTCCACGGCCAAGGCATCCTACTTCATTCTGGAGAATCCGGCGGCAGGGGCGAAGGCCTTCCTGAAGCT CTATCCCGAAACCGCGCCGCGCGGCTCCAGTGAGGAGCAGGCCGTGAAGTCGGTGCTGGAGGCCATCAGCCGCCGCATCA AGCTGTATCTCCCGCCCTATCCGGGCGCCAAGATGGGCAGCATCCGGGAGGATGAGTTCGTCACCGAGGCCAAGATGAAC GACCTCGCCATCTCCGACTTCTCGAAGATCTATACCAACGATCTCATCAACGACATCAACAACTTCGACGTGGAGAAGAT CCGCGCGCAGGCGCGATCCTACGGCCAATGA
Upstream 100 bases:
>100_bases CACGGCATCGTGCGCGGCCTCGAGGCGCGCGTGGTGCACTGGGCGGATCGCGGCCGCAAATAATCACAAGAGCAAAGACA AGAATCCGGGAGAGACGAAC
Downstream 100 bases:
>100_bases ATGCTGTCTCGTCTGAAGGTGGCGGGCGCGTGCCACACGCGCTCGTCACCGGCGTGAGCTCCGGCATCGGCGCGGAGATC GCGAGCCAACTGCTGGCGCT
Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain-Containing Protein; UDP-Glucoronosyl And UDP-Glucosyl Transferase; NMT1/THI5 Like Domain Protein
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MITRRQWLQASGAFAAALALGPRALVAQPMKTVKVGVGLKSINASVINLLIGEALGYNAEEGFKVQGMALGGNANVQVAT NKGDVDVGIGVPSYALPILAKGEWGNALWFYQYTYPYKWDVAVKPGSTIKSYTDLKGKNIGVSDFGGTEYPVTRNVLKQL GIDPDKDVKWTAVGAGVPAGVALQRGAIDALAYYDTGFGIIDGAGIPMELVQRPNNLPMIGGQFLMGLRERIKAERELFV GFGRSTAKASYFILENPAAGAKAFLKLYPETAPRGSSEEQAVKSVLEAISRRIKLYLPPYPGAKMGSIREDEFVTEAKMN DLAISDFSKIYTNDLINDINNFDVEKIRAQARSYGQ
Sequences:
>Translated_356_residues MITRRQWLQASGAFAAALALGPRALVAQPMKTVKVGVGLKSINASVINLLIGEALGYNAEEGFKVQGMALGGNANVQVAT NKGDVDVGIGVPSYALPILAKGEWGNALWFYQYTYPYKWDVAVKPGSTIKSYTDLKGKNIGVSDFGGTEYPVTRNVLKQL GIDPDKDVKWTAVGAGVPAGVALQRGAIDALAYYDTGFGIIDGAGIPMELVQRPNNLPMIGGQFLMGLRERIKAERELFV GFGRSTAKASYFILENPAAGAKAFLKLYPETAPRGSSEEQAVKSVLEAISRRIKLYLPPYPGAKMGSIREDEFVTEAKMN DLAISDFSKIYTNDLINDINNFDVEKIRAQARSYGQ >Mature_356_residues MITRRQWLQASGAFAAALALGPRALVAQPMKTVKVGVGLKSINASVINLLIGEALGYNAEEGFKVQGMALGGNANVQVAT NKGDVDVGIGVPSYALPILAKGEWGNALWFYQYTYPYKWDVAVKPGSTIKSYTDLKGKNIGVSDFGGTEYPVTRNVLKQL GIDPDKDVKWTAVGAGVPAGVALQRGAIDALAYYDTGFGIIDGAGIPMELVQRPNNLPMIGGQFLMGLRERIKAERELFV GFGRSTAKASYFILENPAAGAKAFLKLYPETAPRGSSEEQAVKSVLEAISRRIKLYLPPYPGAKMGSIREDEFVTEAKMN DLAISDFSKIYTNDLINDINNFDVEKIRAQARSYGQ
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38456; Mature: 38456
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRRQWLQASGAFAAALALGPRALVAQPMKTVKVGVGLKSINASVINLLIGEALGYNAE CCCHHHHHHHCCCHHHHHHCCCHHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHHCCCCC EGFKVQGMALGGNANVQVATNKGDVDVGIGVPSYALPILAKGEWGNALWFYQYTYPYKWD CCEEEEEEEECCCCEEEEEECCCCEEEECCCCHHHCEEEECCCCCCEEEEEEEECCEEEE VAVKPGSTIKSYTDLKGKNIGVSDFGGTEYPVTRNVLKQLGIDPDKDVKWTAVGAGVPAG EEECCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCC VALQRGAIDALAYYDTGFGIIDGAGIPMELVQRPNNLPMIGGQFLMGLRERIKAERELFV HHHHCCCHHEEEEECCCCCEEECCCCCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHEE GFGRSTAKASYFILENPAAGAKAFLKLYPETAPRGSSEEQAVKSVLEAISRRIKLYLPPY ECCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCC PGAKMGSIREDEFVTEAKMNDLAISDFSKIYTNDLINDINNFDVEKIRAQARSYGQ CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MITRRQWLQASGAFAAALALGPRALVAQPMKTVKVGVGLKSINASVINLLIGEALGYNAE CCCHHHHHHHCCCHHHHHHCCCHHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHHCCCCC EGFKVQGMALGGNANVQVATNKGDVDVGIGVPSYALPILAKGEWGNALWFYQYTYPYKWD CCEEEEEEEECCCCEEEEEECCCCEEEECCCCHHHCEEEECCCCCCEEEEEEEECCEEEE VAVKPGSTIKSYTDLKGKNIGVSDFGGTEYPVTRNVLKQLGIDPDKDVKWTAVGAGVPAG EEECCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCC VALQRGAIDALAYYDTGFGIIDGAGIPMELVQRPNNLPMIGGQFLMGLRERIKAERELFV HHHHCCCHHEEEEECCCCCEEECCCCCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHEE GFGRSTAKASYFILENPAAGAKAFLKLYPETAPRGSSEEQAVKSVLEAISRRIKLYLPPY ECCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCC PGAKMGSIREDEFVTEAKMNDLAISDFSKIYTNDLINDINNFDVEKIRAQARSYGQ CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA