Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423600
Identifier: 158423600
GI number: 158423600
Start: 2279200
End: 2280411
Strand: Direct
Name: 158423600
Synonym: AZC_1976
Alternate gene names: NA
Gene position: 2279200-2280411 (Clockwise)
Preceding gene: 158423599
Following gene: 158423601
Centisome position: 42.45
GC content: 66.17
Gene sequence:
>1212_bases ATGGGCAGCCACCCCACCGCCATCGAGCCCGCGGGCCTGACGGAGCGCACCGGCATCCTTCATCCGCGCGAGGGTGATCC GGCGCGGACGGAGGCCTATCTGCCCTCGCCCTGCGTCCAGAACCATGCTGCCAACATTGCCGTGCTCGGCAATGGGGATT TGGCGACGGTCTGGTTCGGCGGCACGCAGGAAGGCATTCCGGACATCTCTGTCTATTTCTCGCGCCTCGCGAAGGGATCT GACCGCTGGACGGTACCGCAGAAGCTCTCGGACGACGGCACGCGTTCCGAGCAGAACCCGATCCTTTTCCCGACGCCAAG CGGCGATCTCTGGCTCATCTGGACGGCGCAGATTTCCGGCAACCAGGACACCTCCATGGTGCGCAAGCGCGTCTCGCGCG ACCATGGCGTGACCTGGGGACCCATCGAGACGCTGTTCGAGGCGCCGGAGGGCTTCGGCCTTTTCGTGCGCCAGCCGCCC GTGGTGCTGGATGACGGCGCCTGGGTCATTCCCGTGTTCCATTGCGTGAGCGTGCCGGGCGCCAAATGGGTGGGCGACCG GGACATCAGCGCCGTGCGCGTCTCCGCCGACGAAGGGCGGACATGGACCGAACATGTGGTGCCCCATTCCCTCGGCTGCG TGCATATGAACGTGCTGAAGACGAAAGAGGGCCTCCTGGCGCTCTATCGCAGCCGCTGGGCGGATTTCATCTATCTCAGT CGCTCCGCGGACGGCCGCATCTGGTCCGCGCCCGAAGCGACAGTGCTGCCCAACAACAATTCCTCTATTCAGGCGACCGT TCTGGCGGACGGGCGCATCGCGCTGGTGTTCAACAATTCCAGCAACAAGGACGCCACCGACCGGCGCACCGGGCTTTATG ACGACATCGAGGATGACAGCGCGCCGGTCGCGTCCGCCTCACCCGCCGTCTCGCCCGAGCCAACCGGCCGCACCGCCTTC TGGGGGGCGCCGCGGGCACCGTTGACGCTGGCCCTCTCCGCCGATGGCGGCCGCTCCTGGCCAGTGGTGCGCAACCTCGA GGTTGGCGACGGCTACTGCATGACCAACAATTCCAAGGACGGCCTCAACCGCGAATTCTCCTATCCGTCGATCACGCAGA CGCCGGATGGCATGCTGCAGATCGCCTTCACCTACTATCGCCGCGCCATCAAGCACGTCCGCGTTGCGCCCGATTGGGCG CAGGCGGACTGA
Upstream 100 bases:
>100_bases ATGGCGACCGAGGCCCATGCCATTCGCCGCCTGCTCGACAACAACCCGCGCGACATCAGCCGGGACGATATCCTCGCGAT CTATGAAAAGGCTTATTGAG
Downstream 100 bases:
>100_bases TCGCCGCCAGAACAGAAAAAAAAGGGAGACGCCCCATGGCTGCCATCGCGCAAGCCCATCCGTTGGATCCCGCCGCCGGC CCGGCGCGCGATCTCATCCG
Product: glycosyl hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MGSHPTAIEPAGLTERTGILHPREGDPARTEAYLPSPCVQNHAANIAVLGNGDLATVWFGGTQEGIPDISVYFSRLAKGS DRWTVPQKLSDDGTRSEQNPILFPTPSGDLWLIWTAQISGNQDTSMVRKRVSRDHGVTWGPIETLFEAPEGFGLFVRQPP VVLDDGAWVIPVFHCVSVPGAKWVGDRDISAVRVSADEGRTWTEHVVPHSLGCVHMNVLKTKEGLLALYRSRWADFIYLS RSADGRIWSAPEATVLPNNNSSIQATVLADGRIALVFNNSSNKDATDRRTGLYDDIEDDSAPVASASPAVSPEPTGRTAF WGAPRAPLTLALSADGGRSWPVVRNLEVGDGYCMTNNSKDGLNREFSYPSITQTPDGMLQIAFTYYRRAIKHVRVAPDWA QAD
Sequences:
>Translated_403_residues MGSHPTAIEPAGLTERTGILHPREGDPARTEAYLPSPCVQNHAANIAVLGNGDLATVWFGGTQEGIPDISVYFSRLAKGS DRWTVPQKLSDDGTRSEQNPILFPTPSGDLWLIWTAQISGNQDTSMVRKRVSRDHGVTWGPIETLFEAPEGFGLFVRQPP VVLDDGAWVIPVFHCVSVPGAKWVGDRDISAVRVSADEGRTWTEHVVPHSLGCVHMNVLKTKEGLLALYRSRWADFIYLS RSADGRIWSAPEATVLPNNNSSIQATVLADGRIALVFNNSSNKDATDRRTGLYDDIEDDSAPVASASPAVSPEPTGRTAF WGAPRAPLTLALSADGGRSWPVVRNLEVGDGYCMTNNSKDGLNREFSYPSITQTPDGMLQIAFTYYRRAIKHVRVAPDWA QAD >Mature_402_residues GSHPTAIEPAGLTERTGILHPREGDPARTEAYLPSPCVQNHAANIAVLGNGDLATVWFGGTQEGIPDISVYFSRLAKGSD RWTVPQKLSDDGTRSEQNPILFPTPSGDLWLIWTAQISGNQDTSMVRKRVSRDHGVTWGPIETLFEAPEGFGLFVRQPPV VLDDGAWVIPVFHCVSVPGAKWVGDRDISAVRVSADEGRTWTEHVVPHSLGCVHMNVLKTKEGLLALYRSRWADFIYLSR SADGRIWSAPEATVLPNNNSSIQATVLADGRIALVFNNSSNKDATDRRTGLYDDIEDDSAPVASASPAVSPEPTGRTAFW GAPRAPLTLALSADGGRSWPVVRNLEVGDGYCMTNNSKDGLNREFSYPSITQTPDGMLQIAFTYYRRAIKHVRVAPDWAQ AD
Specific function: Unknown
COG id: COG4692
COG function: function code G; Predicted neuraminidase (sialidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43945; Mature: 43814
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSHPTAIEPAGLTERTGILHPREGDPARTEAYLPSPCVQNHAANIAVLGNGDLATVWFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCEEEEEEC GTQEGIPDISVYFSRLAKGSDRWTVPQKLSDDGTRSEQNPILFPTPSGDLWLIWTAQISG CCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCEEEEEEEEECC NQDTSMVRKRVSRDHGVTWGPIETLFEAPEGFGLFVRQPPVVLDDGAWVIPVFHCVSVPG CCHHHHHHHHHHHHCCCEECHHHHHHCCCCCCEEEEECCCEEEECCCEEEEEHHHHCCCC AKWVGDRDISAVRVSADEGRTWTEHVVPHSLGCVHMNVLKTKEGLLALYRSRWADFIYLS CCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEEEE RSADGRIWSAPEATVLPNNNSSIQATVLADGRIALVFNNSSNKDATDRRTGLYDDIEDDS ECCCCCEECCCCCEEECCCCCCEEEEEEECCEEEEEEECCCCCCCCHHHCCCCCCCCCCC APVASASPAVSPEPTGRTAFWGAPRAPLTLALSADGGRSWPVVRNLEVGDGYCMTNNSKD CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEECCCCC GLNREFSYPSITQTPDGMLQIAFTYYRRAIKHVRVAPDWAQAD CCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHEECCCCHHCCC >Mature Secondary Structure GSHPTAIEPAGLTERTGILHPREGDPARTEAYLPSPCVQNHAANIAVLGNGDLATVWFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCEEEEEEC GTQEGIPDISVYFSRLAKGSDRWTVPQKLSDDGTRSEQNPILFPTPSGDLWLIWTAQISG CCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCEEEEEEEEECC NQDTSMVRKRVSRDHGVTWGPIETLFEAPEGFGLFVRQPPVVLDDGAWVIPVFHCVSVPG CCHHHHHHHHHHHHCCCEECHHHHHHCCCCCCEEEEECCCEEEECCCEEEEEHHHHCCCC AKWVGDRDISAVRVSADEGRTWTEHVVPHSLGCVHMNVLKTKEGLLALYRSRWADFIYLS CCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEEEE RSADGRIWSAPEATVLPNNNSSIQATVLADGRIALVFNNSSNKDATDRRTGLYDDIEDDS ECCCCCEECCCCCEEECCCCCCEEEEEEECCEEEEEEECCCCCCCCHHHCCCCCCCCCCC APVASASPAVSPEPTGRTAFWGAPRAPLTLALSADGGRSWPVVRNLEVGDGYCMTNNSKD CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEECCCCC GLNREFSYPSITQTPDGMLQIAFTYYRRAIKHVRVAPDWAQAD CCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA