Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423597
Identifier: 158423597
GI number: 158423597
Start: 2275450
End: 2276928
Strand: Direct
Name: 158423597
Synonym: AZC_1973
Alternate gene names: NA
Gene position: 2275450-2276928 (Clockwise)
Preceding gene: 158423592
Following gene: 158423599
Centisome position: 42.38
GC content: 68.09
Gene sequence:
>1479_bases GTGAATTTCGCTTTGATGCTGACGATGGGGCATGCGCCTTGTGAACAGGCAGATCTGGAGAAGGATGGCGTGAAAAGTAT CACTGTGGCCGAACAGAGCCTTCCGACATGGGCGAGCGCTGCGGACCTCGCACGCCGCATCGCGACCCGCGCCTGCACGG CTAGCGCGGCGGTGGAAGAGCATCTGGCGCGGATCGCGGCGCTCGAACCGCACCTGAAGGCCTTCATCACGGTCGATGCG GATGGGGCGCGGCGACGCGCGCGCGAACTTGATGTCAGCCCGCAACGGCAGGGGCCGCTGCATGGCCTGCCGGTCGCCAT CAAGGACCTCACGCGCACGAGGGGCCTGCGCACCACGTTCGGCTCGCGCGCCTTTGCCGGCGAGGTGCCCGAGGCCGACG ATCCCGTGGTGGCGCGGCTGCGGCGGGCGGGCGCCGTCATCATCGGCAAGACGAATACGCCGGAATTCGGCTTCGGTGCC GTCTGCGTCAATGATCTGCAAGGGCCAACCGCAAATCCCTATGACCTCGTGCTCACCTCCGGCGGATCGTCGGGCGGCTC CGCGGTGGCGGTGGCAACGGGCATGTCGGCGCTCGCGCATGGCACGGACTTCGGCGGATCGGTGCGCACGCCCGCGAGCT TCTGCGGCGTGGTGTCGATCCGCCCCGCTATCGGCGTCATCGCCGATCCAGACCGTGAACTGGGCTGGACCGGCCTTGCC ACCCATGGCGCCATGGGCCGTTCGGTCGCGGATGCGGCGCTGCTGCTTCAGGCTATGGCCGCGCCCAACGCCTATGATCC GCTCTCGACCGCTCTGGCCGCCGGTCCGGATGCCCCGCCCAGACGGGTCGCCGTGACGCCGGATTTCGCCGTCGCGCCCG TCTGCAAAGCGGTGCGCCGGCGCTTTGCACGTGCGGTGGACGAGATGCGTGCCGTTGTGGGCGAGGTCGTAGAGGCAACG CCCGATTGCGCGGGTGCACCGCTGGCGTTCCGCACCTTGCGGGCGGCGCAGATCGCGCGAACCTATGGTGCATTCGTTGA CGGAAACGTGCCGGTGTCACCCACCGTGCGCTGGAATGTGGAGGCGGCCCGCAGCCTCACGGCGCAGGACTATCTGGCGG CGGAAGCCGCGCGGACAGCGCTCTGGCGCCGTTTCACCCGCTTCTTCGAGCAATATGATGTGCTGGTGACGCCGGCGGCC TCTGTCCTGCCCTGGCCGAATGCCGAGGGAGAGCGCATGGAGATGGACGGGCGATCGCTGGCCGACATCCTTGATTATCT GACGATCACTTTCATCGTCTCGCTGGTGGGTTTTCCGGTCGTCACGCTTCCGGCGCCCCGCCAGCCCGGAGAGGTCCCCT TCGGCCTCCAGCTCATCGGGCGACCCGGCGCGGAGGCTGCGCTCATTGCGCTCGCGGCACGTCTGGAAGGCGAGGCGGGG TTTTGTTGGTCACCCCCGCCATCTGTCAGCATGTTGTAA
Upstream 100 bases:
>100_bases GGTCCCTGTCTGCATCATTCCATCCGGCATCCATCTTGCGTGGTCTCCTCTCAGCAAGTGGTATGCCAAAAGCTGAAAAT GTATTTTCAGTCAGGGCTTT
Downstream 100 bases:
>100_bases GTCCTGCGCGGCTGTCCAGGGGCCGTCACAGGGCGAGGTCGAGCACCTTGCCCTCGAACAGGCGGTCGTAGGAGCCCTGG ATGTGCCGCCTCATGGCGTC
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MNFALMLTMGHAPCEQADLEKDGVKSITVAEQSLPTWASAADLARRIATRACTASAAVEEHLARIAALEPHLKAFITVDA DGARRRARELDVSPQRQGPLHGLPVAIKDLTRTRGLRTTFGSRAFAGEVPEADDPVVARLRRAGAVIIGKTNTPEFGFGA VCVNDLQGPTANPYDLVLTSGGSSGGSAVAVATGMSALAHGTDFGGSVRTPASFCGVVSIRPAIGVIADPDRELGWTGLA THGAMGRSVADAALLLQAMAAPNAYDPLSTALAAGPDAPPRRVAVTPDFAVAPVCKAVRRRFARAVDEMRAVVGEVVEAT PDCAGAPLAFRTLRAAQIARTYGAFVDGNVPVSPTVRWNVEAARSLTAQDYLAAEAARTALWRRFTRFFEQYDVLVTPAA SVLPWPNAEGERMEMDGRSLADILDYLTITFIVSLVGFPVVTLPAPRQPGEVPFGLQLIGRPGAEAALIALAARLEGEAG FCWSPPPSVSML
Sequences:
>Translated_492_residues MNFALMLTMGHAPCEQADLEKDGVKSITVAEQSLPTWASAADLARRIATRACTASAAVEEHLARIAALEPHLKAFITVDA DGARRRARELDVSPQRQGPLHGLPVAIKDLTRTRGLRTTFGSRAFAGEVPEADDPVVARLRRAGAVIIGKTNTPEFGFGA VCVNDLQGPTANPYDLVLTSGGSSGGSAVAVATGMSALAHGTDFGGSVRTPASFCGVVSIRPAIGVIADPDRELGWTGLA THGAMGRSVADAALLLQAMAAPNAYDPLSTALAAGPDAPPRRVAVTPDFAVAPVCKAVRRRFARAVDEMRAVVGEVVEAT PDCAGAPLAFRTLRAAQIARTYGAFVDGNVPVSPTVRWNVEAARSLTAQDYLAAEAARTALWRRFTRFFEQYDVLVTPAA SVLPWPNAEGERMEMDGRSLADILDYLTITFIVSLVGFPVVTLPAPRQPGEVPFGLQLIGRPGAEAALIALAARLEGEAG FCWSPPPSVSML >Mature_492_residues MNFALMLTMGHAPCEQADLEKDGVKSITVAEQSLPTWASAADLARRIATRACTASAAVEEHLARIAALEPHLKAFITVDA DGARRRARELDVSPQRQGPLHGLPVAIKDLTRTRGLRTTFGSRAFAGEVPEADDPVVARLRRAGAVIIGKTNTPEFGFGA VCVNDLQGPTANPYDLVLTSGGSSGGSAVAVATGMSALAHGTDFGGSVRTPASFCGVVSIRPAIGVIADPDRELGWTGLA THGAMGRSVADAALLLQAMAAPNAYDPLSTALAAGPDAPPRRVAVTPDFAVAPVCKAVRRRFARAVDEMRAVVGEVVEAT PDCAGAPLAFRTLRAAQIARTYGAFVDGNVPVSPTVRWNVEAARSLTAQDYLAAEAARTALWRRFTRFFEQYDVLVTPAA SVLPWPNAEGERMEMDGRSLADILDYLTITFIVSLVGFPVVTLPAPRQPGEVPFGLQLIGRPGAEAALIALAARLEGEAG FCWSPPPSVSML
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI222831590, Length=471, Percent_Identity=25.4777070063694, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI195972892, Length=238, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI166795287, Length=127, Percent_Identity=41.7322834645669, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17537465, Length=241, Percent_Identity=30.7053941908714, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17538252, Length=145, Percent_Identity=36.551724137931, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17543272, Length=458, Percent_Identity=24.235807860262, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71990152, Length=184, Percent_Identity=35.3260869565217, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17556264, Length=186, Percent_Identity=30.1075268817204, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17556276, Length=235, Percent_Identity=28.0851063829787, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17556278, Length=235, Percent_Identity=28.0851063829787, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17538254, Length=131, Percent_Identity=35.8778625954198, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319685, Length=392, Percent_Identity=28.8265306122449, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323950, Length=462, Percent_Identity=22.2943722943723, Blast_Score=87, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6320448, Length=129, Percent_Identity=34.8837209302326, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648435, Length=258, Percent_Identity=32.1705426356589, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI24648437, Length=258, Percent_Identity=32.1705426356589, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI45550774, Length=258, Percent_Identity=32.1705426356589, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24648113, Length=460, Percent_Identity=26.7391304347826, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI161078093, Length=501, Percent_Identity=26.9461077844311, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24648441, Length=426, Percent_Identity=24.4131455399061, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI24648439, Length=426, Percent_Identity=24.4131455399061, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI21356731, Length=509, Percent_Identity=26.7190569744597, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24644968, Length=504, Percent_Identity=25, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24652985, Length=494, Percent_Identity=25.1012145748988, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI19922090, Length=494, Percent_Identity=25.1012145748988, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24652981, Length=494, Percent_Identity=25.1012145748988, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24652983, Length=494, Percent_Identity=25.1012145748988, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 51692; Mature: 51692
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00571 AMIDASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFALMLTMGHAPCEQADLEKDGVKSITVAEQSLPTWASAADLARRIATRACTASAAVEE CCEEEEEEECCCCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLARIAALEPHLKAFITVDADGARRRARELDVSPQRQGPLHGLPVAIKDLTRTRGLRTTF HHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHC GSRAFAGEVPEADDPVVARLRRAGAVIIGKTNTPEFGFGAVCVNDLQGPTANPYDLVLTS CCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEC GGSSGGSAVAVATGMSALAHGTDFGGSVRTPASFCGVVSIRPAIGVIADPDRELGWTGLA CCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEECCCCCCCCCCCH THGAMGRSVADAALLLQAMAAPNAYDPLSTALAAGPDAPPRRVAVTPDFAVAPVCKAVRR HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH RFARAVDEMRAVVGEVVEATPDCAGAPLAFRTLRAAQIARTYGAFVDGNVPVSPTVRWNV HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECH EAARSLTAQDYLAAEAARTALWRRFTRFFEQYDVLVTPAASVLPWPNAEGERMEMDGRSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCEEECCCHHH ADILDYLTITFIVSLVGFPVVTLPAPRQPGEVPFGLQLIGRPGAEAALIALAARLEGEAG HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC FCWSPPPSVSML CCCCCCCCCCCC >Mature Secondary Structure MNFALMLTMGHAPCEQADLEKDGVKSITVAEQSLPTWASAADLARRIATRACTASAAVEE CCEEEEEEECCCCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLARIAALEPHLKAFITVDADGARRRARELDVSPQRQGPLHGLPVAIKDLTRTRGLRTTF HHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHC GSRAFAGEVPEADDPVVARLRRAGAVIIGKTNTPEFGFGAVCVNDLQGPTANPYDLVLTS CCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEC GGSSGGSAVAVATGMSALAHGTDFGGSVRTPASFCGVVSIRPAIGVIADPDRELGWTGLA CCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEECCCCCCCCCCCH THGAMGRSVADAALLLQAMAAPNAYDPLSTALAAGPDAPPRRVAVTPDFAVAPVCKAVRR HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH RFARAVDEMRAVVGEVVEATPDCAGAPLAFRTLRAAQIARTYGAFVDGNVPVSPTVRWNV HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECH EAARSLTAQDYLAAEAARTALWRRFTRFFEQYDVLVTPAASVLPWPNAEGERMEMDGRSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCEEECCCHHH ADILDYLTITFIVSLVGFPVVTLPAPRQPGEVPFGLQLIGRPGAEAALIALAARLEGEAG HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC FCWSPPPSVSML CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]