Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423592
Identifier: 158423592
GI number: 158423592
Start: 2270906
End: 2271265
Strand: Direct
Name: 158423592
Synonym: AZC_1968
Alternate gene names: NA
Gene position: 2270906-2271265 (Clockwise)
Preceding gene: 158423578
Following gene: 158423597
Centisome position: 42.29
GC content: 66.11
Gene sequence:
>360_bases ATGGCGCAGGCGGGCGGAATCTCCATCCATGGGGTCGATATCGCGCAGGGCGTCGCCGCGCGGGGCCTGCAGGTGAAGGT CTATGCCCTCGATCCGGAGCGGCGGCTGATCACCGAAGGCGTTCTCGGCGCCAATGGCGTGTTCGACGATCCCATCATCA CCGGCGCCGGTATCACGGCGGGCACCTATGAGGTGGAGTTTGCGCTGGGCGCCTGGCTCAAGGCGAATGGCTATGGCGCG CGGGAGGCGGCCTTCCTCGACATCGTGCCGTTCCGCTTCGTCGTCACGCGGGTGGAGGAGCATTACCATCTGCCGTTCAA GTTCACGCCCTGGGGCATCCAGCTGTTTCGCGGCGTGTGA
Upstream 100 bases:
>100_bases GCCGGCAGGGCGGCCCGAAGACCCGCGGGACGCGATGACCGAAGGGAATGAAACCGCTACCATGGGGTCTCTTCCTTCAC GGTGATGCGGGGTCAGAGGC
Downstream 100 bases:
>100_bases TCAGGCGAGGCGCCGCGACAGGCCGGTGAAGCGCTCCATCACCATGATGAGGGCGACGGTGAAGACGATCAGAACGCCGG AGAGGGCGGCGATGGTCACG
Product: transthyretin-like protein
Products: NA
Alternate protein names: HIU hydrolase 2; HIUHase 2 [H]
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAQAGGISIHGVDIAQGVAARGLQVKVYALDPERRLITEGVLGANGVFDDPIITGAGITAGTYEVEFALGAWLKANGYGA REAAFLDIVPFRFVVTRVEEHYHLPFKFTPWGIQLFRGV
Sequences:
>Translated_119_residues MAQAGGISIHGVDIAQGVAARGLQVKVYALDPERRLITEGVLGANGVFDDPIITGAGITAGTYEVEFALGAWLKANGYGA REAAFLDIVPFRFVVTRVEEHYHLPFKFTPWGIQLFRGV >Mature_118_residues AQAGGISIHGVDIAQGVAARGLQVKVYALDPERRLITEGVLGANGVFDDPIITGAGITAGTYEVEFALGAWLKANGYGAR EAAFLDIVPFRFVVTRVEEHYHLPFKFTPWGIQLFRGV
Specific function: Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) [H]
COG id: COG2351
COG function: function code R; Transthyretin-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014306 - InterPro: IPR000895 [H]
Pfam domain/function: PF00576 Transthyretin [H]
EC number: =3.5.2.17 [H]
Molecular weight: Translated: 12846; Mature: 12715
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAGGISIHGVDIAQGVAARGLQVKVYALDPERRLITEGVLGANGVFDDPIITGAGITA CCCCCCEEEECCHHHCCHHCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCEEECCCCCC GTYEVEFALGAWLKANGYGAREAAFLDIVPFRFVVTRVEEHYHLPFKFTPWGIQLFRGV CEEEEEEEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHEECCEEECCHHEEEECCC >Mature Secondary Structure AQAGGISIHGVDIAQGVAARGLQVKVYALDPERRLITEGVLGANGVFDDPIITGAGITA CCCCCEEEECCHHHCCHHCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCEEECCCCCC GTYEVEFALGAWLKANGYGAREAAFLDIVPFRFVVTRVEEHYHLPFKFTPWGIQLFRGV CEEEEEEEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHEECCEEECCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]