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The map label for this gene is cspG [H]

Identifier: 158423560

GI number: 158423560

Start: 2237525

End: 2238103

Strand: Direct

Name: cspG [H]

Synonym: AZC_1936

Alternate gene names: 158423560

Gene position: 2237525-2238103 (Clockwise)

Preceding gene: 158423559

Following gene: 158423561

Centisome position: 41.67

GC content: 68.22

Gene sequence:

>579_bases
ATGGGGTCTGACGCACTGGGTCTCGGGCCGCAGTTCACCAGTCCTTCGGAAGATCCGGCGGAACGGCCCGTCGATCTCTT
GGAGGTGTCAGGGGCCGTCAAGTGGTTCGATGCCGCCAAGGGCTACGGCTTCATCGTGCCCGATGACGGAGGTCCGGATG
TGCTCGTGCACGTCACCTGCCTGCGCCGGGACGGCTTCACCACCGCCATGGAAGGGGCCCGCATCGTTTGCGAGGCCGTG
CGCCGCTCCAAGGGTCTTCAGGCCTTCCGCGTGCTGTCGCTGGACCTGTCCACCGCCGTCCAGCCCGTGCCCCAGCCCAC
CCGCAGCCGTGTCCATGTCGCCCCGTCCGGCGGGTTCGAGCGGGCCACGGTGAAATGGTTCAACCGCATGCGCGGCTTCG
GCTTCCTTTCGAAGGGCGAGGGAACGCCGGACATCTTCGTGCATATGGAAACGCTGCGGCAGCAGGGCCTGACCGAACTG
CGGCCGGGACAGAGCGTGCTGGTGCGCTATGGCGACGGCCCGAAGGGCCTCATGGCCACCGAGGTGAAGGCGGAGGACGC
GCCCGCCGGCGCCCATTGA

Upstream 100 bases:

>100_bases
ATGTCGCGTCGCGCTGCAACGAAAGGGTGTGCGTCGCTGCGGTAACTTGCTATCCTTGAGGTTCCTCTCGGTTCGCGCAT
GCGCGGTTGTCGGGGTTGTC

Downstream 100 bases:

>100_bases
CGCTGCGGCGCCCCGAATGGCCGGGCTCGGAGGACTTGCCAAGCCGCGCCCTTCGGCCCACACCAGCGCCAGCACTCCTC
TCCAAGGGATCCCGATGATT

Product: DNA-binding cold-shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MGSDALGLGPQFTSPSEDPAERPVDLLEVSGAVKWFDAAKGYGFIVPDDGGPDVLVHVTCLRRDGFTTAMEGARIVCEAV
RRSKGLQAFRVLSLDLSTAVQPVPQPTRSRVHVAPSGGFERATVKWFNRMRGFGFLSKGEGTPDIFVHMETLRQQGLTEL
RPGQSVLVRYGDGPKGLMATEVKAEDAPAGAH

Sequences:

>Translated_192_residues
MGSDALGLGPQFTSPSEDPAERPVDLLEVSGAVKWFDAAKGYGFIVPDDGGPDVLVHVTCLRRDGFTTAMEGARIVCEAV
RRSKGLQAFRVLSLDLSTAVQPVPQPTRSRVHVAPSGGFERATVKWFNRMRGFGFLSKGEGTPDIFVHMETLRQQGLTEL
RPGQSVLVRYGDGPKGLMATEVKAEDAPAGAH
>Mature_191_residues
GSDALGLGPQFTSPSEDPAERPVDLLEVSGAVKWFDAAKGYGFIVPDDGGPDVLVHVTCLRRDGFTTAMEGARIVCEAVR
RSKGLQAFRVLSLDLSTAVQPVPQPTRSRVHVAPSGGFERATVKWFNRMRGFGFLSKGEGTPDIFVHMETLRQQGLTELR
PGQSVLVRYGDGPKGLMATEVKAEDAPAGAH

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI1786841, Length=69, Percent_Identity=42.0289855072464, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789979, Length=67, Percent_Identity=43.2835820895522, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1788126, Length=69, Percent_Identity=39.1304347826087, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 20636; Mature: 20505

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSDALGLGPQFTSPSEDPAERPVDLLEVSGAVKWFDAAKGYGFIVPDDGGPDVLVHVTC
CCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCEEECCCCCCEEEEECCCCCCEEEEEEE
LRRDGFTTAMEGARIVCEAVRRSKGLQAFRVLSLDLSTAVQPVPQPTRSRVHVAPSGGFE
ECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCEEEECCCCCCC
RATVKWFNRMRGFGFLSKGEGTPDIFVHMETLRQQGLTELRPGQSVLVRYGDGPKGLMAT
HHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEE
EVKAEDAPAGAH
EEECCCCCCCCC
>Mature Secondary Structure 
GSDALGLGPQFTSPSEDPAERPVDLLEVSGAVKWFDAAKGYGFIVPDDGGPDVLVHVTC
CCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCEEECCCCCCEEEEECCCCCCEEEEEEE
LRRDGFTTAMEGARIVCEAVRRSKGLQAFRVLSLDLSTAVQPVPQPTRSRVHVAPSGGFE
ECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCEEEECCCCCCC
RATVKWFNRMRGFGFLSKGEGTPDIFVHMETLRQQGLTELRPGQSVLVRYGDGPKGLMAT
HHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEE
EVKAEDAPAGAH
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10483731 [H]