Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is ycjY [C]
Identifier: 158423505
GI number: 158423505
Start: 2155061
End: 2155972
Strand: Direct
Name: ycjY [C]
Synonym: AZC_1881
Alternate gene names: 158423505
Gene position: 2155061-2155972 (Clockwise)
Preceding gene: 158423504
Following gene: 158423506
Centisome position: 40.13
GC content: 67.11
Gene sequence:
>912_bases TTGATCGAGGCCCGGGACAGGACCATGCAAGAGAAACTCACCTTCATGTCGGACGGCCTCAAGCTGTCCGCGGTGCTTCA CGTGCCCGAAGGCCGCCGGCCCGACGAGCGCCTGCCGGCTTTCATCGTCCTGCACGGCTTCGTCGGCTCGAAGGACGAAT CCCACGCCGAGATTCAGGCCCGGATGCTGGAAGATTTCGGCTATGTGGCGCTGCGCTTCGATTTCCGCTGCTGCGGCGAG AGCGAAGGCGAGCGGGCGCAGGTGCGCTGTTTCGATCAGGTGGCGGACGCCAAGAATGCGCTGACCTTCCTGGCGGGACG CCCGGAAGTGGACCCGGCCCGCATCGGCGTGGTCGGCCATTCCTTCGGCGCGGCGGTCGCGGTCTATTCGGCGGGCGTGG ATAGCCGCTTTGCCTGCGTCATCTCCTCCTGCGGCTGGGGCGACGGGGAACGCAAGTTCCGCGGCCAGCACCCGACGCCG GAAGCCTGGGCGCGCTTCACCGGGCTGCTGGAGGCTGGCCGCAAGCACAAGCGCGAGACCGGGCAGAGCATGTGGATCTC CCGCTTCGACGCGGTGCCGATCCCCGAGCCGCTGCGCCGCAATCTCTCGCCCAAGGCCATCATGGAGATCCCGGTCGAGA CCGCGATCAGCATGTATGAGTTCCGGGCTGATGACGTGGTGGGCAACATCGCCCCACGTCCGGCGCTGTTCTTCCACACG GCGGACGACGGCATCACCCCCACCGAGCAGTCCATCCGGATGTTCGAGAAGGCCGGCCAGCCGGCGGAACTGATGCTCAT CACCGGAACGTCGCACTTCCCGCTGTCGGAGCAGGATGCGCCGCGCACCAAGCTGATGATCAGGGGCTGGCTGGACAAGT TCTTCCCTTCGCCGCTCGGGGGGGCGGCATGA
Upstream 100 bases:
>100_bases CCAATCTCCAGCGCCCCGGAAATGTACGGCAAATGAACGTGTGGGGCACACCCGCGCCGCTGGAGTGGCGCACTCATCAC TTCCCCTTCGCCGCCATCGG
Downstream 100 bases:
>100_bases GCGGCACGCCGCTCACCCTCGCGCCGGAGGCGCTCTCGGCCTTTGCGGCGGGCCTGCTGGAGGCGGGCGGGTTCCGCCCC GCCGATGCGAAGAAATCCGC
Product: dienelactone hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQARMLEDFGYVALRFDFRCCGE SEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGHSFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTP EAWARFTGLLEAGRKHKRETGQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLGGAA
Sequences:
>Translated_303_residues MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQARMLEDFGYVALRFDFRCCGE SEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGHSFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTP EAWARFTGLLEAGRKHKRETGQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLGGAA >Mature_303_residues MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQARMLEDFGYVALRFDFRCCGE SEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGHSFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTP EAWARFTGLLEAGRKHKRETGQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLGGAA
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ycjY [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 33569; Mature: 33569
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQA CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHH RMLEDFGYVALRFDFRCCGESEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGH HHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEEEEEC SFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTPEAWARFTGLLEAGRKHKRET CHHHHHHHEECCCCCCEEEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH GQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT CHHHHHHHCCCCCCCHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLG CCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC GAA CCC >Mature Secondary Structure MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQA CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHH RMLEDFGYVALRFDFRCCGESEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGH HHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEEEEEC SFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTPEAWARFTGLLEAGRKHKRET CHHHHHHHEECCCCCCEEEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH GQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT CHHHHHHHCCCCCCCHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLG CCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC GAA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1916281 [H]