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The map label for this gene is yfdE [H]

Identifier: 158423499

GI number: 158423499

Start: 2149662

End: 2150870

Strand: Direct

Name: yfdE [H]

Synonym: AZC_1875

Alternate gene names: 158423499

Gene position: 2149662-2150870 (Clockwise)

Preceding gene: 158423498

Following gene: 158423500

Centisome position: 40.03

GC content: 62.03

Gene sequence:

>1209_bases
ATGACAGTTGACCTCGGTCCCCGTCCGTTGGACGGCCTTAGAATTCTCGACCTGACGACCGTCGTCATGGGGCCCTACGC
CTCTTCTATCCTCGCGGACATGGGAGCGGATGTGATCAAGCTCGAAAGTCCGGGCGGCGACATTCTGCGACAGGTTGGGC
CAAGCCGCAGTGGCGAGGCTGGCGGGATGTTCCTGCACGCCAACCGCGGCAAGCGCGGCATTGTGTTGGACCTCAAGTCT
GAAGAGGGCCGTGCCACCGCTCTCCAGCTCATCGCGGACGTCGATGTGCTCTTCTACAATCTGCGTCCAAGCGCCATGGA
GCGTCTCGGGCTGAGCTACGAAGCGGTCGCCGCTCAGAATCCCGCTATTATCTACGTAGGCGCCTTCGGCTTTGGACGCG
ACGGACGGTATGCCGACCTCCCCGCCTATGATGATCTGATCCAAGGACTCGCGGCGATCCCGGCTCTTCTCGCCGAAGCC
GGCGACGGCACGCCACGCTATGTGCCGGTCAACATTGCGGACCGTATCGTCGGTTTACATGCCGCCATCGCCATACTCGG
GGCAGTGCATTTCCGCGATCGGACCGGCCTTGGACAGCGGGTCGACGTTCCGATGTTCGAGACCATGGCCAGCATGGTGC
TCGCAGATCACATGGCGGGGTTGAGCTACACACCCCCCCTGGACGCAGGAGGCTATCGCCGCCTGCTGACCAAGGAACGT
CGACCCTTTCGTACAGCAGATGGCCACCTATGTGTTGTCCTCTACACGGACCAGCATTGGCGGCGTTTCCTTGAGATCGC
AGGTCGGGACGACCTGACGAGCGACCCCCGTTTCGTCAATCATGCCGCCCGCATAAAACATGCCGATGAGATCGCGCGGG
AATTGGCCACCATCCTGGCCACACGCAGCACCCGGGCATGGCAGGACGTGCTGGGAAAGGCCGACATTCCGAACGCCGTC
ATGCACACCATCGAGAGCTTGATGCAGGATGGTCATCTGGAGGACGTCGGCTTCTTCATCCATTCGCTGCATCCGTCCGA
AGGTCCCGTGATCGAGATGGCGCCCCCGTCCCGGTGGAGCCTTTCGCAGCCCCGAGCGTCGCGCCCAGCGCCTCGGCTGG
GCGAGCACACGAGCGAAATCGCAGCAGAACTCGGGAATGCTCGACGCGAACCGAACGATGTTGAGCATCAGCCAATCAGA
AGTTTCTGA

Upstream 100 bases:

>100_bases
CCTGCTGCGGCCAGGTCACTGTGGTGGATATCGCCCGGCATGATCGACCAGTGCGCGAAGTGCTGGCACATCGCCCGCCC
GCGTTCGCGGAGGCCGCGCC

Downstream 100 bases:

>100_bases
CAGGAGGTGCGGCCATGGCCGGTCTTCATTTCGAGGATTTCTCCGTGGGGCAACGGTTTCAGCACGGCCTCAGCCGAACC
GTCACGGAGATGGACAACAC

Product: acyl-CoA transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTVDLGPRPLDGLRILDLTTVVMGPYASSILADMGADVIKLESPGGDILRQVGPSRSGEAGGMFLHANRGKRGIVLDLKS
EEGRATALQLIADVDVLFYNLRPSAMERLGLSYEAVAAQNPAIIYVGAFGFGRDGRYADLPAYDDLIQGLAAIPALLAEA
GDGTPRYVPVNIADRIVGLHAAIAILGAVHFRDRTGLGQRVDVPMFETMASMVLADHMAGLSYTPPLDAGGYRRLLTKER
RPFRTADGHLCVVLYTDQHWRRFLEIAGRDDLTSDPRFVNHAARIKHADEIARELATILATRSTRAWQDVLGKADIPNAV
MHTIESLMQDGHLEDVGFFIHSLHPSEGPVIEMAPPSRWSLSQPRASRPAPRLGEHTSEIAAELGNARREPNDVEHQPIR
SF

Sequences:

>Translated_402_residues
MTVDLGPRPLDGLRILDLTTVVMGPYASSILADMGADVIKLESPGGDILRQVGPSRSGEAGGMFLHANRGKRGIVLDLKS
EEGRATALQLIADVDVLFYNLRPSAMERLGLSYEAVAAQNPAIIYVGAFGFGRDGRYADLPAYDDLIQGLAAIPALLAEA
GDGTPRYVPVNIADRIVGLHAAIAILGAVHFRDRTGLGQRVDVPMFETMASMVLADHMAGLSYTPPLDAGGYRRLLTKER
RPFRTADGHLCVVLYTDQHWRRFLEIAGRDDLTSDPRFVNHAARIKHADEIARELATILATRSTRAWQDVLGKADIPNAV
MHTIESLMQDGHLEDVGFFIHSLHPSEGPVIEMAPPSRWSLSQPRASRPAPRLGEHTSEIAAELGNARREPNDVEHQPIR
SF
>Mature_401_residues
TVDLGPRPLDGLRILDLTTVVMGPYASSILADMGADVIKLESPGGDILRQVGPSRSGEAGGMFLHANRGKRGIVLDLKSE
EGRATALQLIADVDVLFYNLRPSAMERLGLSYEAVAAQNPAIIYVGAFGFGRDGRYADLPAYDDLIQGLAAIPALLAEAG
DGTPRYVPVNIADRIVGLHAAIAILGAVHFRDRTGLGQRVDVPMFETMASMVLADHMAGLSYTPPLDAGGYRRLLTKERR
PFRTADGHLCVVLYTDQHWRRFLEIAGRDDLTSDPRFVNHAARIKHADEIARELATILATRSTRAWQDVLGKADIPNAVM
HTIESLMQDGHLEDVGFFIHSLHPSEGPVIEMAPPSRWSLSQPRASRPAPRLGEHTSEIAAELGNARREPNDVEHQPIRS
F

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=385, Percent_Identity=27.2727272727273, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI300863124, Length=411, Percent_Identity=26.5206812652068, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI266456254, Length=398, Percent_Identity=28.643216080402, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI42794625, Length=398, Percent_Identity=28.643216080402, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI300863126, Length=378, Percent_Identity=25.3968253968254, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI13376042, Length=411, Percent_Identity=23.8442822384428, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI266458393, Length=253, Percent_Identity=30.8300395256917, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI266458397, Length=205, Percent_Identity=32.6829268292683, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI42822893, Length=135, Percent_Identity=34.8148148148148, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI266458395, Length=135, Percent_Identity=34.8148148148148, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI87082093, Length=327, Percent_Identity=29.9694189602446, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1788717, Length=405, Percent_Identity=26.9135802469136, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI1786222, Length=330, Percent_Identity=24.8484848484848, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115535051, Length=311, Percent_Identity=24.7588424437299, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648431, Length=384, Percent_Identity=32.03125, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24585488, Length=208, Percent_Identity=32.2115384615385, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 43850; Mature: 43718

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDLGPRPLDGLRILDLTTVVMGPYASSILADMGADVIKLESPGGDILRQVGPSRSGEA
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCC
GGMFLHANRGKRGIVLDLKSEEGRATALQLIADVDVLFYNLRPSAMERLGLSYEAVAAQN
CCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEECCHHHHHHHCCCHHHHHCCC
PAIIYVGAFGFGRDGRYADLPAYDDLIQGLAAIPALLAEAGDGTPRYVPVNIADRIVGLH
CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHH
AAIAILGAVHFRDRTGLGQRVDVPMFETMASMVLADHMAGLSYTPPLDAGGYRRLLTKER
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
RPFRTADGHLCVVLYTDQHWRRFLEIAGRDDLTSDPRFVNHAARIKHADEIARELATILA
CCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TRSTRAWQDVLGKADIPNAVMHTIESLMQDGHLEDVGFFIHSLHPSEGPVIEMAPPSRWS
HCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCC
LSQPRASRPAPRLGEHTSEIAAELGNARREPNDVEHQPIRSF
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVDLGPRPLDGLRILDLTTVVMGPYASSILADMGADVIKLESPGGDILRQVGPSRSGEA
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCC
GGMFLHANRGKRGIVLDLKSEEGRATALQLIADVDVLFYNLRPSAMERLGLSYEAVAAQN
CCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEECCHHHHHHHCCCHHHHHCCC
PAIIYVGAFGFGRDGRYADLPAYDDLIQGLAAIPALLAEAGDGTPRYVPVNIADRIVGLH
CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHH
AAIAILGAVHFRDRTGLGQRVDVPMFETMASMVLADHMAGLSYTPPLDAGGYRRLLTKER
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
RPFRTADGHLCVVLYTDQHWRRFLEIAGRDDLTSDPRFVNHAARIKHADEIARELATILA
CCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TRSTRAWQDVLGKADIPNAVMHTIESLMQDGHLEDVGFFIHSLHPSEGPVIEMAPPSRWS
HCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCC
LSQPRASRPAPRLGEHTSEIAAELGNARREPNDVEHQPIRSF
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]