Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is cpx [H]
Identifier: 158423418
GI number: 158423418
Start: 2052813
End: 2054525
Strand: Direct
Name: cpx [H]
Synonym: AZC_1794
Alternate gene names: 158423418
Gene position: 2052813-2054525 (Clockwise)
Preceding gene: 158423417
Following gene: 158423430
Centisome position: 38.23
GC content: 66.14
Gene sequence:
>1713_bases ATGCGCAAACCCCAGAATCTCGTCTATGGCGTGGACGATCTGCCGCCCGCGCGCGTCGGCCTTTTGAGTGCGCTCCAGCA GGTGGCCTTCCTCAGCGCGCTGCTGAGCGTGCCCAGCATCGCGCTCGCAAACCTCGGGCTCGATGACGACCAGTTCCTGC GCCTGGCAGCGGCGACCCTGTTCTGTTCCGGCTTCGTGCTGGTCCTCCAGGGCTTTGGCATCGGCGGGGTCGGCGCCCGG CTGTTCTATCCGCTCCAGTGCACCACGGCGGCCATTCCAGCGCTCGTCTATGCCTCGTCCGCCGGCCTGTCGCTCGCCGA GAACTTCACCATGGTCGGCATGGTGGGCGTGTCCCAGGTGCTGTTTTCCTTTGTCATCTTCCGCCTGCGGGCGATCTTCA CGGTGGAGGTGGCGGGGCTCGCGGTATTTCTCATCGGTGTCGGACTCGGCCAGCAGGGCCTCTTTCTCGTGCTGGACCTG CCGCCGGACAGGCCCGACGCCATCGCCCATCTCACCATCGTCGGGGTGACGCTGGCGACGCTGGTCATCCTGCATGTGTA TGTGCAAAGCCGGTTAAGGCTGTTCACCAACCTCATCGGCCTCTGCGTGGGGATGGTACTGAGCGTCGCGCTGGGCCAAC TCGATCCCCATGACCTGCGCCTGTTCGCGGATGCGCGCGTCGTGGATTTCCCCCGTCCGCCGCTTTTCGGCTGGGCCTTC AACCTCGGCGCGGTCATCCCCTTCATGGTCACCGGCTTCGTCTTCGCGCTCACCTCCATGGGCGTGCAGACCATTGCCCA GCGCAACAATGACCGCGACTGGAAGAGCCCGGACCTGGTCTCCATCGGCCGGGGCATCCGTGCGGAAGGCGTGATGCATA TGATGGCGGGTTTTCTGAACGCCATGCCCATGGTGGCGTCGGGCGGCGCAGTGGCGCTGGCGGCGGCCTCCGGCTGCACG GCACGAGCGCTCGCCTTCTGGACCGGCGGCCTGTTGATGACCTTCTCGCTCCTACCCAAGGTGATCGGCTTCTGGTTGCT GATGCCTGTCTCGGTCACAGGCGCGCTCTTCATCTTCCTGTCCACCTTCACGACGGTGAACGGCATCCAGCTTGTGGCGA GCCGGGTGCTGGATGCCCGCAAGGTGTTGGCGATCGGAATGGGCTTCGTCGCCGCCATCGCCTACGAGCCACTGCACCGG TTGCTGGACGGGCAGGTGCCGGGCCTGCGGCTGTTCACCTTCTCCGCCTTCGCGGTGTCCATCCTCGTCACGGTAGTGCT GCTCGCCATCTTCCGCATCGGCGTCACCCGCAAGGTGGTGCGGCGCTTTCCGGCCAGCGGTGCCCGGCATGACGACGTGG CGAACTTCATCGAGGCCGAGGGCGCGCGGTGGAGCGCGCGGGTGGACGTGGTGCAGCGCGCCGCGCAGGTGACCTGGCAT GCGCTGGAACTGATCGGCCGCGATTATGTGGATCCCGAACGGCCGGTGATCGAGGTGACCACCCGCTATAACGATATCCT GTTCGACATCGTGCTGCGCTACGAGGGCACGGCGCCGGCCCTGGCGAGCCGCCCGCCGACGGCGGAGGAACTGCTGGAAA ATCCTGCGCTGGCGGAGCAGTTGACGGGCTTCCTCATTACCCGCCTCGCGCCGGACCTGAAGATCCAGCGCATCGGCAGT TCGTGGGAACTGCACTTCCGCCTGCCGGTATGA
Upstream 100 bases:
>100_bases GAGCCTGCACGGCTGGTGGTTCGATCTCGAAAGCGGTGACCTCTGGGTCACGGATGCTCCCGGAACGCCTCTGATGCCGG CCACCTGAGCCGGCCCCCCC
Downstream 100 bases:
>100_bases GGCGGGAGCGGGTGTACCCGCCCCCGCATAGGATCAGCCGGCGATGGCCGTCAGCTTGTCCAGCAGCGCCTGAGGGATCT TCACGCCCTCGCGCGCGGTG
Product: xanthine/uracil permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MRKPQNLVYGVDDLPPARVGLLSALQQVAFLSALLSVPSIALANLGLDDDQFLRLAAATLFCSGFVLVLQGFGIGGVGAR LFYPLQCTTAAIPALVYASSAGLSLAENFTMVGMVGVSQVLFSFVIFRLRAIFTVEVAGLAVFLIGVGLGQQGLFLVLDL PPDRPDAIAHLTIVGVTLATLVILHVYVQSRLRLFTNLIGLCVGMVLSVALGQLDPHDLRLFADARVVDFPRPPLFGWAF NLGAVIPFMVTGFVFALTSMGVQTIAQRNNDRDWKSPDLVSIGRGIRAEGVMHMMAGFLNAMPMVASGGAVALAAASGCT ARALAFWTGGLLMTFSLLPKVIGFWLLMPVSVTGALFIFLSTFTTVNGIQLVASRVLDARKVLAIGMGFVAAIAYEPLHR LLDGQVPGLRLFTFSAFAVSILVTVVLLAIFRIGVTRKVVRRFPASGARHDDVANFIEAEGARWSARVDVVQRAAQVTWH ALELIGRDYVDPERPVIEVTTRYNDILFDIVLRYEGTAPALASRPPTAEELLENPALAEQLTGFLITRLAPDLKIQRIGS SWELHFRLPV
Sequences:
>Translated_570_residues MRKPQNLVYGVDDLPPARVGLLSALQQVAFLSALLSVPSIALANLGLDDDQFLRLAAATLFCSGFVLVLQGFGIGGVGAR LFYPLQCTTAAIPALVYASSAGLSLAENFTMVGMVGVSQVLFSFVIFRLRAIFTVEVAGLAVFLIGVGLGQQGLFLVLDL PPDRPDAIAHLTIVGVTLATLVILHVYVQSRLRLFTNLIGLCVGMVLSVALGQLDPHDLRLFADARVVDFPRPPLFGWAF NLGAVIPFMVTGFVFALTSMGVQTIAQRNNDRDWKSPDLVSIGRGIRAEGVMHMMAGFLNAMPMVASGGAVALAAASGCT ARALAFWTGGLLMTFSLLPKVIGFWLLMPVSVTGALFIFLSTFTTVNGIQLVASRVLDARKVLAIGMGFVAAIAYEPLHR LLDGQVPGLRLFTFSAFAVSILVTVVLLAIFRIGVTRKVVRRFPASGARHDDVANFIEAEGARWSARVDVVQRAAQVTWH ALELIGRDYVDPERPVIEVTTRYNDILFDIVLRYEGTAPALASRPPTAEELLENPALAEQLTGFLITRLAPDLKIQRIGS SWELHFRLPV >Mature_570_residues MRKPQNLVYGVDDLPPARVGLLSALQQVAFLSALLSVPSIALANLGLDDDQFLRLAAATLFCSGFVLVLQGFGIGGVGAR LFYPLQCTTAAIPALVYASSAGLSLAENFTMVGMVGVSQVLFSFVIFRLRAIFTVEVAGLAVFLIGVGLGQQGLFLVLDL PPDRPDAIAHLTIVGVTLATLVILHVYVQSRLRLFTNLIGLCVGMVLSVALGQLDPHDLRLFADARVVDFPRPPLFGWAF NLGAVIPFMVTGFVFALTSMGVQTIAQRNNDRDWKSPDLVSIGRGIRAEGVMHMMAGFLNAMPMVASGGAVALAAASGCT ARALAFWTGGLLMTFSLLPKVIGFWLLMPVSVTGALFIFLSTFTTVNGIQLVASRVLDARKVLAIGMGFVAAIAYEPLHR LLDGQVPGLRLFTFSAFAVSILVTVVLLAIFRIGVTRKVVRRFPASGARHDDVANFIEAEGARWSARVDVVQRAAQVTWH ALELIGRDYVDPERPVIEVTTRYNDILFDIVLRYEGTAPALASRPPTAEELLENPALAEQLTGFLITRLAPDLKIQRIGS SWELHFRLPV
Specific function: Unknown
COG id: COG2233
COG function: function code F; Xanthine/uracil permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082178, Length=415, Percent_Identity=22.6506024096386, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790087, Length=411, Percent_Identity=21.8978102189781, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87082181, Length=336, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017588 - InterPro: IPR006042 - InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 61452; Mature: 61452
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKPQNLVYGVDDLPPARVGLLSALQQVAFLSALLSVPSIALANLGLDDDQFLRLAAATL CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHH FCSGFVLVLQGFGIGGVGARLFYPLQCTTAAIPALVYASSAGLSLAENFTMVGMVGVSQV HHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHH LFSFVIFRLRAIFTVEVAGLAVFLIGVGLGQQGLFLVLDLPPDRPDAIAHLTIVGVTLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LVILHVYVQSRLRLFTNLIGLCVGMVLSVALGQLDPHDLRLFADARVVDFPRPPLFGWAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCHHHHH NLGAVIPFMVTGFVFALTSMGVQTIAQRNNDRDWKSPDLVSIGRGIRAEGVMHMMAGFLN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH AMPMVASGGAVALAAASGCTARALAFWTGGLLMTFSLLPKVIGFWLLMPVSVTGALFIFL CCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STFTTVNGIQLVASRVLDARKVLAIGMGFVAAIAYEPLHRLLDGQVPGLRLFTFSAFAVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH ILVTVVLLAIFRIGVTRKVVRRFPASGARHDDVANFIEAEGARWSARVDVVQRAAQVTWH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ALELIGRDYVDPERPVIEVTTRYNDILFDIVLRYEGTAPALASRPPTAEELLENPALAEQ HHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHH LTGFLITRLAPDLKIQRIGSSWELHFRLPV HHHHHHHHHCCCCEEEECCCCEEEEEECCC >Mature Secondary Structure MRKPQNLVYGVDDLPPARVGLLSALQQVAFLSALLSVPSIALANLGLDDDQFLRLAAATL CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHH FCSGFVLVLQGFGIGGVGARLFYPLQCTTAAIPALVYASSAGLSLAENFTMVGMVGVSQV HHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHH LFSFVIFRLRAIFTVEVAGLAVFLIGVGLGQQGLFLVLDLPPDRPDAIAHLTIVGVTLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LVILHVYVQSRLRLFTNLIGLCVGMVLSVALGQLDPHDLRLFADARVVDFPRPPLFGWAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCHHHHH NLGAVIPFMVTGFVFALTSMGVQTIAQRNNDRDWKSPDLVSIGRGIRAEGVMHMMAGFLN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH AMPMVASGGAVALAAASGCTARALAFWTGGLLMTFSLLPKVIGFWLLMPVSVTGALFIFL CCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STFTTVNGIQLVASRVLDARKVLAIGMGFVAAIAYEPLHRLLDGQVPGLRLFTFSAFAVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH ILVTVVLLAIFRIGVTRKVVRRFPASGARHDDVANFIEAEGARWSARVDVVQRAAQVTWH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ALELIGRDYVDPERPVIEVTTRYNDILFDIVLRYEGTAPALASRPPTAEELLENPALAEQ HHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHH LTGFLITRLAPDLKIQRIGSSWELHFRLPV HHHHHHHHHCCCCEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11792842; 8162194 [H]