Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is icfA [H]
Identifier: 158423417
GI number: 158423417
Start: 2051841
End: 2052800
Strand: Direct
Name: icfA [H]
Synonym: AZC_1793
Alternate gene names: 158423417
Gene position: 2051841-2052800 (Clockwise)
Preceding gene: 158423416
Following gene: 158423418
Centisome position: 38.21
GC content: 66.25
Gene sequence:
>960_bases GTGCTTTGCCGGCTCTGGCGGGTCATCGGCGCCCGTGCGCCACGGCGGCTTGCGGCCGCGACGCTTCGCTCAAAGCCGGC TGCGCTTTCTCTGAGGCGCGCGGTCTGCCGTCAGACACCTCATCTATTTCTGCGCGGATCGAAAGTTCTTCCTCGAACAT TCCGGGGCGTGCAAAGGCACGAGATTCGAGGCATGATCGGCAATACTGCCCCGCTCGCCTCGATACGCGCGCATCTTGAG GAACATGGGATGATCGACGACAGTCATACGGGTGATACTCCGTCCGCGTGCGCCGCCGAATGCCGGGATGTTGATCATCT TCTTGAGGGTGTCCGCCGCTTCAAGGCACGCTTCTACGACGAAGCGCCTGCGCTGATGCAGGGGCTGGTCGAGAAGGGCC AGAAGCCGGCGGTCCTGATGATCTCCTGTTCCGACTCGCGCGTCGATCCTGCGCTCCTGACGGGGGCCCTGCCGGGCGAA CTGTTCGTCGTGCGGAACGTCGCCAATCTCGTGCCCGCCTATGCCCCGGACGACGGGCTGCACGGAACAGGCGCGGCGCT GGAATATGCGGTGCGTGACCTCGGCGTCGATCACATCGTGGTGCTGGGGCACGCCCATTGCGGGGGCATCAAGGCGATGC TGGCGACCGCCGGTGGCGAGCGCCCGCCGCGCGAGTTCGTGGGGCCGTGGGTGGAGATGGCGCTCGCCGCCAGCCGCCTG CATCTGCCCGCCGAGGATGGCGAACAGCGCGAGATGCCCCTCGACCATCTCAAGGCCGTGCCCTTCCTTGCCGAGCGTGC CTCAATCCTCGGCTCGCTGGACAATCTCATGACCTATCCCTGGGTCCGCGAGCGCGTCGAGGCCGGATCGCTGAGCCTGC ACGGCTGGTGGTTCGATCTCGAAAGCGGTGACCTCTGGGTCACGGATGCTCCCGGAACGCCTCTGATGCCGGCCACCTGA
Upstream 100 bases:
>100_bases CACGCTCGCCGCCGCACGCGCCCACCGGGCACCGGCACCGCTGCACTGAGCCGCCACGCTGCCGCTGCTTCGGTAGCCGT CGCCCGCGCCATCCCTGAGC
Downstream 100 bases:
>100_bases GCCGGCCCCCCCATGCGCAAACCCCAGAATCTCGTCTATGGCGTGGACGATCTGCCGCCCGCGCGCGTCGGCCTTTTGAG TGCGCTCCAGCAGGTGGCCT
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLCRLWRVIGARAPRRLAAATLRSKPAALSLRRAVCRQTPHLFLRGSKVLPRTFRGVQRHEIRGMIGNTAPLASIRAHLE EHGMIDDSHTGDTPSACAAECRDVDHLLEGVRRFKARFYDEAPALMQGLVEKGQKPAVLMISCSDSRVDPALLTGALPGE LFVVRNVANLVPAYAPDDGLHGTGAALEYAVRDLGVDHIVVLGHAHCGGIKAMLATAGGERPPREFVGPWVEMALAASRL HLPAEDGEQREMPLDHLKAVPFLAERASILGSLDNLMTYPWVRERVEAGSLSLHGWWFDLESGDLWVTDAPGTPLMPAT
Sequences:
>Translated_319_residues MLCRLWRVIGARAPRRLAAATLRSKPAALSLRRAVCRQTPHLFLRGSKVLPRTFRGVQRHEIRGMIGNTAPLASIRAHLE EHGMIDDSHTGDTPSACAAECRDVDHLLEGVRRFKARFYDEAPALMQGLVEKGQKPAVLMISCSDSRVDPALLTGALPGE LFVVRNVANLVPAYAPDDGLHGTGAALEYAVRDLGVDHIVVLGHAHCGGIKAMLATAGGERPPREFVGPWVEMALAASRL HLPAEDGEQREMPLDHLKAVPFLAERASILGSLDNLMTYPWVRERVEAGSLSLHGWWFDLESGDLWVTDAPGTPLMPAT >Mature_319_residues MLCRLWRVIGARAPRRLAAATLRSKPAALSLRRAVCRQTPHLFLRGSKVLPRTFRGVQRHEIRGMIGNTAPLASIRAHLE EHGMIDDSHTGDTPSACAAECRDVDHLLEGVRRFKARFYDEAPALMQGLVEKGQKPAVLMISCSDSRVDPALLTGALPGE LFVVRNVANLVPAYAPDDGLHGTGAALEYAVRDLGVDHIVVLGHAHCGGIKAMLATAGGERPPREFVGPWVEMALAASRL HLPAEDGEQREMPLDHLKAVPFLAERASILGSLDNLMTYPWVRERVEAGSLSLHGWWFDLESGDLWVTDAPGTPLMPAT
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786534, Length=214, Percent_Identity=34.5794392523364, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1786318, Length=212, Percent_Identity=31.6037735849057, Blast_Score=86, Evalue=4e-18, Organism=Caenorhabditis elegans, GI25147564, Length=233, Percent_Identity=28.3261802575107, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI115532990, Length=244, Percent_Identity=23.3606557377049, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324292, Length=222, Percent_Identity=28.3783783783784, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 34751; Mature: 34751
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCRLWRVIGARAPRRLAAATLRSKPAALSLRRAVCRQTPHLFLRGSKVLPRTFRGVQRH CHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH EIRGMIGNTAPLASIRAHLEEHGMIDDSHTGDTPSACAAECRDVDHLLEGVRRFKARFYD HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC EAPALMQGLVEKGQKPAVLMISCSDSRVDPALLTGALPGELFVVRNVANLVPAYAPDDGL CCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC HGTGAALEYAVRDLGVDHIVVLGHAHCGGIKAMLATAGGERPPREFVGPWVEMALAASRL CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH HLPAEDGEQREMPLDHLKAVPFLAERASILGSLDNLMTYPWVRERVEAGSLSLHGWWFDL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEEE ESGDLWVTDAPGTPLMPAT CCCCEEEECCCCCCCCCCC >Mature Secondary Structure MLCRLWRVIGARAPRRLAAATLRSKPAALSLRRAVCRQTPHLFLRGSKVLPRTFRGVQRH CHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH EIRGMIGNTAPLASIRAHLEEHGMIDDSHTGDTPSACAAECRDVDHLLEGVRRFKARFYD HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC EAPALMQGLVEKGQKPAVLMISCSDSRVDPALLTGALPGELFVVRNVANLVPAYAPDDGL CCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC HGTGAALEYAVRDLGVDHIVVLGHAHCGGIKAMLATAGGERPPREFVGPWVEMALAASRL CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH HLPAEDGEQREMPLDHLKAVPFLAERASILGSLDNLMTYPWVRERVEAGSLSLHGWWFDL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEEE ESGDLWVTDAPGTPLMPAT CCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1584776 [H]