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The map label for this gene is lppB [H]

Identifier: 158423355

GI number: 158423355

Start: 1982448

End: 1983539

Strand: Direct

Name: lppB [H]

Synonym: AZC_1731

Alternate gene names: 158423355

Gene position: 1982448-1983539 (Clockwise)

Preceding gene: 158423354

Following gene: 158423356

Centisome position: 36.92

GC content: 71.79

Gene sequence:

>1092_bases
ATGTTCGGTGCGTGCGAGTTGGGTCACATGACATCTTCCGGCAAAATCTTGGGGCGTATTGTGACCGCGCGCTTTGCCGT
GGTGGGCCTGTTGGCCGCCGGTGTGGCGGGTTGCAGCGCGGATGTGACACGATTCTCTGAAGCTGGCGGTGGCCCCCAGG
CCTCCCTGCCGCGTCAGGGTTCGCCGGAGGTCACGGGGTCTCTGGGCGCCGCGCCCTCGGCGCGGGTTGATTCGGCGCCC
ATCGGCGCGCCGGTCGGTTCCGCCCAGACGGCCTATGCGCCGGCCAATACCTATGGCAATTCGGGCGGCCAGCCGCTCTA
CGGCTCCTCCGCCTACAACACGCCACCCGTGGCGCCTGCGCCGCAGGCGGCTCCGGCGGCGCACACAGCCGCTGCTGCGG
CGCCGCGCACCCCGGCGCCCGGTCCGCAGCCGCTCGGCACCTTGTCCTCTACCCAGCCGGCACCTGCCCGTGCGTCGCAG
CCGGTTGCGGCGGCGCCGCTGGCCACCCCGGCTCCCGCGCCCGTCGCCGCAGCTCCCGCCGCGCCGAAGACGCAGCAGGT
GGCTGCCGCGACCCCAGTCGTGACGCCCGCCACGCCGGCCGTTCCCGCCAAGACCGCGGCCGTGACGCCCGCCGCCACCT
CTGCGCCCGCCGCGGCCAAGGTGGATGCTGCCGCCAAGGATGACGTGGACGAGGCCCGCTCGCCGGGTTCCGGTCCGCAG
TTCCGCGCGCCGGTCCGTGGTCGCGTGATCTCCGGCTTTGGCCCCAAGCCCGGCGGCACCCGCAACGATGGCGTGAATTT
CGCCGTGCCGGAAGGCACCGCCGTGCGCGCCGCCGAGGACGGCACGGTCGCCTATGCCGGCAACGAGCTGAAGGGCTACG
GCAACCTCGTTCTCATCAAGCATGCGGACGGCTTTGTCACCGCCTATGCCCACAACAGCGAGATCAGCGTAAAGCGCGGC
GACACCGTGCGGCGCGGCCAGATCATCGCCAAGGCGGGCCAGAGTGGCGGTGTCACCACGCCCCAGTTGCACTTTGAGAT
CCGCAAGGGTTCGCAGCCGGTCGATCCGAGCCAGTATGTGGCCGGCCTCTGA

Upstream 100 bases:

>100_bases
AATGAGGCGAGTTGTGGCTTGCGTGCCACAGTCTCGCTATTCTTGTGGCTGAGACGGATGCTTAAGCGGGCGTTTACCCG
ATCCGACTTTACTCCACGAC

Downstream 100 bases:

>100_bases
CGGGCGTTCGGTTTCCTCCTGTCTTGACGGCCGGGCTTGCCCGGCCGTTTTTCTGTCTTCCCCGCAACTGGCGGGCCGCT
TGACGCTCCCCGTGCCCGCC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MFGACELGHMTSSGKILGRIVTARFAVVGLLAAGVAGCSADVTRFSEAGGGPQASLPRQGSPEVTGSLGAAPSARVDSAP
IGAPVGSAQTAYAPANTYGNSGGQPLYGSSAYNTPPVAPAPQAAPAAHTAAAAAPRTPAPGPQPLGTLSSTQPAPARASQ
PVAAAPLATPAPAPVAAAPAAPKTQQVAAATPVVTPATPAVPAKTAAVTPAATSAPAAAKVDAAAKDDVDEARSPGSGPQ
FRAPVRGRVISGFGPKPGGTRNDGVNFAVPEGTAVRAAEDGTVAYAGNELKGYGNLVLIKHADGFVTAYAHNSEISVKRG
DTVRRGQIIAKAGQSGGVTTPQLHFEIRKGSQPVDPSQYVAGL

Sequences:

>Translated_363_residues
MFGACELGHMTSSGKILGRIVTARFAVVGLLAAGVAGCSADVTRFSEAGGGPQASLPRQGSPEVTGSLGAAPSARVDSAP
IGAPVGSAQTAYAPANTYGNSGGQPLYGSSAYNTPPVAPAPQAAPAAHTAAAAAPRTPAPGPQPLGTLSSTQPAPARASQ
PVAAAPLATPAPAPVAAAPAAPKTQQVAAATPVVTPATPAVPAKTAAVTPAATSAPAAAKVDAAAKDDVDEARSPGSGPQ
FRAPVRGRVISGFGPKPGGTRNDGVNFAVPEGTAVRAAEDGTVAYAGNELKGYGNLVLIKHADGFVTAYAHNSEISVKRG
DTVRRGQIIAKAGQSGGVTTPQLHFEIRKGSQPVDPSQYVAGL
>Mature_363_residues
MFGACELGHMTSSGKILGRIVTARFAVVGLLAAGVAGCSADVTRFSEAGGGPQASLPRQGSPEVTGSLGAAPSARVDSAP
IGAPVGSAQTAYAPANTYGNSGGQPLYGSSAYNTPPVAPAPQAAPAAHTAAAAAPRTPAPGPQPLGTLSSTQPAPARASQ
PVAAAPLATPAPAPVAAAPAAPKTQQVAAATPVVTPATPAVPAKTAAVTPAATSAPAAAKVDAAAKDDVDEARSPGSGPQ
FRAPVRGRVISGFGPKPGGTRNDGVNFAVPEGTAVRAAEDGTVAYAGNELKGYGNLVLIKHADGFVTAYAHNSEISVKRG
DTVRRGQIIAKAGQSGGVTTPQLHFEIRKGSQPVDPSQYVAGL

Specific function: May be a virulence determinant [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=45.8333333333333, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI87082174, Length=120, Percent_Identity=40.8333333333333, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI87082297, Length=115, Percent_Identity=40.8695652173913, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=38.2608695652174, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 35583; Mature: 35583

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGACELGHMTSSGKILGRIVTARFAVVGLLAAGVAGCSADVTRFSEAGGGPQASLPRQG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
SPEVTGSLGAAPSARVDSAPIGAPVGSAQTAYAPANTYGNSGGQPLYGSSAYNTPPVAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQAAPAAHTAAAAAPRTPAPGPQPLGTLSSTQPAPARASQPVAAAPLATPAPAPVAAAPA
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
APKTQQVAAATPVVTPATPAVPAKTAAVTPAATSAPAAAKVDAAAKDDVDEARSPGSGPQ
CCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCHHEECCHHHCCHHHHCCCCCCCC
FRAPVRGRVISGFGPKPGGTRNDGVNFAVPEGTAVRAAEDGTVAYAGNELKGYGNLVLIK
EECCCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCEEEEE
HADGFVTAYAHNSEISVKRGDTVRRGQIIAKAGQSGGVTTPQLHFEIRKGSQPVDPSQYV
ECCCEEEEEEECCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHH
AGL
CCC
>Mature Secondary Structure
MFGACELGHMTSSGKILGRIVTARFAVVGLLAAGVAGCSADVTRFSEAGGGPQASLPRQG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
SPEVTGSLGAAPSARVDSAPIGAPVGSAQTAYAPANTYGNSGGQPLYGSSAYNTPPVAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQAAPAAHTAAAAAPRTPAPGPQPLGTLSSTQPAPARASQPVAAAPLATPAPAPVAAAPA
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
APKTQQVAAATPVVTPATPAVPAKTAAVTPAATSAPAAAKVDAAAKDDVDEARSPGSGPQ
CCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCHHEECCHHHCCHHHHCCCCCCCC
FRAPVRGRVISGFGPKPGGTRNDGVNFAVPEGTAVRAAEDGTVAYAGNELKGYGNLVLIK
EECCCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCEEEEE
HADGFVTAYAHNSEISVKRGDTVRRGQIIAKAGQSGGVTTPQLHFEIRKGSQPVDPSQYV
ECCCEEEEEEECCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHH
AGL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]