Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423354
Identifier: 158423354
GI number: 158423354
Start: 1981075
End: 1982352
Strand: Direct
Name: 158423354
Synonym: AZC_1730
Alternate gene names: NA
Gene position: 1981075-1982352 (Clockwise)
Preceding gene: 158423353
Following gene: 158423355
Centisome position: 36.89
GC content: 67.14
Gene sequence:
>1278_bases ATGCGTTTGATGCTGGCGGCGCGGCCTTTTCGATGCGTCATGGCCATCGCCGTGGTGCTGCTCGTCACCGCCTGCGGCGG TCGCCCGCCCGGTGTTCTCGTGCCCGTTCAGGCCCCCGACGTGCCCGGCACCTCCAAGGTGTCGATGATCGTCGCCACCA CCCGCGCCAAGGCCACCACCACGACGGACATGTTCTCCGGCGAGCGCGGCAAGGCGCCGAGCTTTGCGGAGATCACCGTC TCCCTTCCGCCGGACGCCGCGCGTCAGGTGGGCGAGGTCCAGTGGCCGCGCAGCGTGCCGGGCAACCCGGCCACCGACTT TGTCGTGACGGATGCGCAGGACCTCTCCATGCCGCAGGCGCAGGCCTGGCTGAACCGGGACGTCGCCAAGCGGCCGAAGC ACCGCGTGCTGGTGTTCATCCACGGCTATAACAACCGCTTCGACGATGCCGTCTTCCGTTTCGCGCAGATCGTGCACGAT TCCGGCGCGGACGTGACGCCGATCCTCTTCACCTGGCCTTCGCGCGGCAGCCTGCTGGCCTATGGCTACGACCGGGAGAG CGCCGTCTATTCCCGCGACGCCCTCGAAACCCTCCTCACCGCTCTCAACAAGGACCCCGCGGTGGGCGAGATTTCCGTGC TCGCGCACTCCATGGGCAATTGGGTGACCTTCGAGGCGCTGCGCCAGATGGCCATCCGCAACGGCCGGGTGCTGCCGAAG ATCAAGAACATCATGCTGGCCGCGCCCGACGTGGACGTGGATATCTTCAACAGCCAGTGGCAGGACCTCGGCACGCCGTC GCCCAACGTCACCATCTTCGTCTCGCAGGATGACAAGGCGCTGCGCGTCTCCCAGCGCGTGTGGGGTTCGCGTGCCCGCC TCGGCCAGATCGATCCCGAGCAGGAGCCGTTCCGCAGCGAGTTCGAGGCCCGCAAGATCAACGTCTATGACCTCACCAAG CTGAACACGCCGGACGGGCTCAACCACGGCAAGTTCGCCGAGAGCCCGGAAGTGGTGCGGATGATCGGCGGGCGCATCGC CGCGCAGTCCACCATCACGGATAGCCGCGAGGGCGTAGGCGATCGCATCGTGCAGGTGACGCAGGGCGCGGCTTCCGCCG TCGGTCAGGCGGCGGGCGTGGTCATCGCGGCGCCGGTGGCGGTGGTGGATTCCAACACCCGCGACAATCTGAGCTCGCAG GTGGAGAACCTCGGTGGCACCGTGTCCTCGACGGTGCATTCCACCACCAACATGATGACAACGCCCCCTTCACAATGA
Upstream 100 bases:
>100_bases CCTTCCTCGTCTCCATGGACGTCGATTTCTGATCGGCCCGCATTGCGCCTCCGCTCCCGCTGATCTACCAAGAAGGCGGT GGCGGTGGAGCGGTAATAGG
Downstream 100 bases:
>100_bases GGCGAGTTGTGGCTTGCGTGCCACAGTCTCGCTATTCTTGTGGCTGAGACGGATGCTTAAGCGGGCGTTTACCCGATCCG ACTTTACTCCACGACATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MRLMLAARPFRCVMAIAVVLLVTACGGRPPGVLVPVQAPDVPGTSKVSMIVATTRAKATTTTDMFSGERGKAPSFAEITV SLPPDAARQVGEVQWPRSVPGNPATDFVVTDAQDLSMPQAQAWLNRDVAKRPKHRVLVFIHGYNNRFDDAVFRFAQIVHD SGADVTPILFTWPSRGSLLAYGYDRESAVYSRDALETLLTALNKDPAVGEISVLAHSMGNWVTFEALRQMAIRNGRVLPK IKNIMLAAPDVDVDIFNSQWQDLGTPSPNVTIFVSQDDKALRVSQRVWGSRARLGQIDPEQEPFRSEFEARKINVYDLTK LNTPDGLNHGKFAESPEVVRMIGGRIAAQSTITDSREGVGDRIVQVTQGAASAVGQAAGVVIAAPVAVVDSNTRDNLSSQ VENLGGTVSSTVHSTTNMMTTPPSQ
Sequences:
>Translated_425_residues MRLMLAARPFRCVMAIAVVLLVTACGGRPPGVLVPVQAPDVPGTSKVSMIVATTRAKATTTTDMFSGERGKAPSFAEITV SLPPDAARQVGEVQWPRSVPGNPATDFVVTDAQDLSMPQAQAWLNRDVAKRPKHRVLVFIHGYNNRFDDAVFRFAQIVHD SGADVTPILFTWPSRGSLLAYGYDRESAVYSRDALETLLTALNKDPAVGEISVLAHSMGNWVTFEALRQMAIRNGRVLPK IKNIMLAAPDVDVDIFNSQWQDLGTPSPNVTIFVSQDDKALRVSQRVWGSRARLGQIDPEQEPFRSEFEARKINVYDLTK LNTPDGLNHGKFAESPEVVRMIGGRIAAQSTITDSREGVGDRIVQVTQGAASAVGQAAGVVIAAPVAVVDSNTRDNLSSQ VENLGGTVSSTVHSTTNMMTTPPSQ >Mature_425_residues MRLMLAARPFRCVMAIAVVLLVTACGGRPPGVLVPVQAPDVPGTSKVSMIVATTRAKATTTTDMFSGERGKAPSFAEITV SLPPDAARQVGEVQWPRSVPGNPATDFVVTDAQDLSMPQAQAWLNRDVAKRPKHRVLVFIHGYNNRFDDAVFRFAQIVHD SGADVTPILFTWPSRGSLLAYGYDRESAVYSRDALETLLTALNKDPAVGEISVLAHSMGNWVTFEALRQMAIRNGRVLPK IKNIMLAAPDVDVDIFNSQWQDLGTPSPNVTIFVSQDDKALRVSQRVWGSRARLGQIDPEQEPFRSEFEARKINVYDLTK LNTPDGLNHGKFAESPEVVRMIGGRIAAQSTITDSREGVGDRIVQVTQGAASAVGQAAGVVIAAPVAVVDSNTRDNLSSQ VENLGGTVSSTVHSTTNMMTTPPSQ
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45915; Mature: 45915
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLMLAARPFRCVMAIAVVLLVTACGGRPPGVLVPVQAPDVPGTSKVSMIVATTRAKATT CEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCC TTDMFSGERGKAPSFAEITVSLPPDAARQVGEVQWPRSVPGNPATDFVVTDAQDLSMPQA CHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEECHHHCCCCHH QAWLNRDVAKRPKHRVLVFIHGYNNRFDDAVFRFAQIVHDSGADVTPILFTWPSRGSLLA HHHHCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEE YGYDRESAVYSRDALETLLTALNKDPAVGEISVLAHSMGNWVTFEALRQMAIRNGRVLPK ECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEHHHHHHHHHHHCCCCCHH IKNIMLAAPDVDVDIFNSQWQDLGTPSPNVTIFVSQDDKALRVSQRVWGSRARLGQIDPE HHCEEEECCCCCEEECCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCC QEPFRSEFEARKINVYDLTKLNTPDGLNHGKFAESPEVVRMIGGRIAAQSTITDSREGVG CCHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCHH DRIVQVTQGAASAVGQAAGVVIAAPVAVVDSNTRDNLSSQVENLGGTVSSTVHSTTNMMT HHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEE TPPSQ CCCCC >Mature Secondary Structure MRLMLAARPFRCVMAIAVVLLVTACGGRPPGVLVPVQAPDVPGTSKVSMIVATTRAKATT CEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCC TTDMFSGERGKAPSFAEITVSLPPDAARQVGEVQWPRSVPGNPATDFVVTDAQDLSMPQA CHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEECHHHCCCCHH QAWLNRDVAKRPKHRVLVFIHGYNNRFDDAVFRFAQIVHDSGADVTPILFTWPSRGSLLA HHHHCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEE YGYDRESAVYSRDALETLLTALNKDPAVGEISVLAHSMGNWVTFEALRQMAIRNGRVLPK ECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEHHHHHHHHHHHCCCCCHH IKNIMLAAPDVDVDIFNSQWQDLGTPSPNVTIFVSQDDKALRVSQRVWGSRARLGQIDPE HHCEEEECCCCCEEECCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCC QEPFRSEFEARKINVYDLTKLNTPDGLNHGKFAESPEVVRMIGGRIAAQSTITDSREGVG CCHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCHH DRIVQVTQGAASAVGQAAGVVIAAPVAVVDSNTRDNLSSQVENLGGTVSSTVHSTTNMMT HHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEE TPPSQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA