| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is gph [C]
Identifier: 158423110
GI number: 158423110
Start: 1686875
End: 1687582
Strand: Reverse
Name: gph [C]
Synonym: AZC_1486
Alternate gene names: 158423110
Gene position: 1687582-1686875 (Counterclockwise)
Preceding gene: 158423112
Following gene: 158423109
Centisome position: 31.43
GC content: 69.77
Gene sequence:
>708_bases ATGACCGGCCTGAAGGCGCTCCTGTTCGACAAGGACGGCACCCTCGTGCATTTCGACCACACTTGGGGACCGGCCGCCGG CGCGGTGATGCGGGCGCTCGCGGGGGACGATCCCCACGCACTGAAGCGCCTTGAGGAGGTGAGCCACTATCTGCCCGAGG AGAGCCGCTTCCTGCCCTCCTCGCCGCTGGTGGCGGGCTCCTCCGCCCATTACGGGCCGCAGTGGGCGCAGTGCCTTGGC CGGCAGGCGGACACCGCCTTCCTGACCGAAATCGACAGGCTCTTCTCCGACGAGGGCCTGAAAGCGCTGACGCCGCTCGG CCGGCCGGCCGACGTGCTCGGGCATTTTCACCGGCAGGGGATGCGGCTCGGCATCGTGACCAACGATGCGGAAGCCAATT CCCGCCTTCAGGCCGAGGCGCTGGGGCTTACGCCTTTCCTCGATCTCATCCACGGTTATGATTCCGGCTTCGGCTCCAAG CCCGGTCCCGGCATGGTAAGCGCCGCCGCCGAACGGCTGGGCCTTGCCCCGCACCAGACGGCGGTGATCGGCGACAGCGC CCACGACATGGCCGCCGCCCACAGCGCCGGCGCCCGTTTCATCCTCGTGCGCACGGGCCCCGCGCCGGTGGAGCATCTCT ATGATGCCGCCGATCTCGTGGTGGACAGCATCGACGACCTGCCGGCGCGGCTTGCGGCGGCCGCCTGA
Upstream 100 bases:
>100_bases GAGGGTGTTTTTCCGTTCAATCATTGCGAACAACATAGTAAATGACGCCCTCTCCGGCGTCACCGCCCCTCCCTTACCGC TCCACGGAACGAAGCTCCCC
Downstream 100 bases:
>100_bases GGGGGCGGGCTTCCGCTTCCGCGCGCGCTGGCCTAGACAGAATGGGAGGCGGGCACCTGAAGCCCGCAGGCAGGGTCCGG CATGATCAAGCGACGGCTCT
Product: phosphatase
Products: glycolate; phosphate
Alternate protein names: Phosphoglycolate Phosphatase; Phosphatase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; HAD-Like Hydrolase; Hydrolase; Phosphoglycolate Phosphatase Protein
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTGLKALLFDKDGTLVHFDHTWGPAAGAVMRALAGDDPHALKRLEEVSHYLPEESRFLPSSPLVAGSSAHYGPQWAQCLG RQADTAFLTEIDRLFSDEGLKALTPLGRPADVLGHFHRQGMRLGIVTNDAEANSRLQAEALGLTPFLDLIHGYDSGFGSK PGPGMVSAAAERLGLAPHQTAVIGDSAHDMAAAHSAGARFILVRTGPAPVEHLYDAADLVVDSIDDLPARLAAAA
Sequences:
>Translated_235_residues MTGLKALLFDKDGTLVHFDHTWGPAAGAVMRALAGDDPHALKRLEEVSHYLPEESRFLPSSPLVAGSSAHYGPQWAQCLG RQADTAFLTEIDRLFSDEGLKALTPLGRPADVLGHFHRQGMRLGIVTNDAEANSRLQAEALGLTPFLDLIHGYDSGFGSK PGPGMVSAAAERLGLAPHQTAVIGDSAHDMAAAHSAGARFILVRTGPAPVEHLYDAADLVVDSIDDLPARLAAAA >Mature_234_residues TGLKALLFDKDGTLVHFDHTWGPAAGAVMRALAGDDPHALKRLEEVSHYLPEESRFLPSSPLVAGSSAHYGPQWAQCLGR QADTAFLTEIDRLFSDEGLKALTPLGRPADVLGHFHRQGMRLGIVTNDAEANSRLQAEALGLTPFLDLIHGYDSGFGSKP GPGMVSAAAERLGLAPHQTAVIGDSAHDMAAAHSAGARFILVRTGPAPVEHLYDAADLVVDSIDDLPARLAAAA
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789787, Length=119, Percent_Identity=33.6134453781513, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18
Molecular weight: Translated: 24811; Mature: 24680
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLKALLFDKDGTLVHFDHTWGPAAGAVMRALAGDDPHALKRLEEVSHYLPEESRFLPS CCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC SPLVAGSSAHYGPQWAQCLGRQADTAFLTEIDRLFSDEGLKALTPLGRPADVLGHFHRQG CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHCC MRLGIVTNDAEANSRLQAEALGLTPFLDLIHGYDSGFGSKPGPGMVSAAAERLGLAPHQT CEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCE AVIGDSAHDMAAAHSAGARFILVRTGPAPVEHLYDAADLVVDSIDDLPARLAAAA EEECCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGLKALLFDKDGTLVHFDHTWGPAAGAVMRALAGDDPHALKRLEEVSHYLPEESRFLPS CCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC SPLVAGSSAHYGPQWAQCLGRQADTAFLTEIDRLFSDEGLKALTPLGRPADVLGHFHRQG CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHCC MRLGIVTNDAEANSRLQAEALGLTPFLDLIHGYDSGFGSKPGPGMVSAAAERLGLAPHQT CEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCE AVIGDSAHDMAAAHSAGARFILVRTGPAPVEHLYDAADLVVDSIDDLPARLAAAA EEECCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: 2-phosphoglycolate; H2O
Specific reaction: 2-phosphoglycolate + H2O = glycolate + phosphate
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA