| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yegS [C]
Identifier: 158423086
GI number: 158423086
Start: 1662336
End: 1663277
Strand: Reverse
Name: yegS [C]
Synonym: AZC_1462
Alternate gene names: 158423086
Gene position: 1663277-1662336 (Counterclockwise)
Preceding gene: 158423090
Following gene: 158423084
Centisome position: 30.97
GC content: 70.91
Gene sequence:
>942_bases ATGGGCCGCACGCTGGTTGTGTTGAACGCGAAGGCCGGGACCCTCATGGATCTCGGGCCGAAGACCACCGCCGAGGCCGT GGACAAGGCACTCACCCGGCCCGGCCGGGACGTCACCGTGGTGCTGGCGGAGGGCAAGCAGATCCCGGGCGCCGTCCGCT CGGCGATCGAGGGCGGATACGACACGCTGATCGTCGGGGCCGGTGATGGCACGGTGAGCTACGCCGCATCGGTGCTGGCC GGCAGCGACGTCGCGCTCGGCGTGCTGCCGCTCGGCACCATGAACCTGCTCGCCTACGACATCGGCCTGCCGCGTGACCT GCCCGGCGCGGTCGCGGCACTCGCCACCGCCCGGCCCATGCGCGTGGACCTGACGACGCTCAACGGTCGCGCCTTCCATG GCGTCTCTGGGGTCGGCTTCTTCTCCCAGATGGCGCTCGCCCGCGAGCAGGTGCGCGAGCAGCGCGGCCGCATCTTCGGC TGGCTGTGGGCGCTGTGGCGTGCGGTATTCCGTTCCGGCCGCCTGTCGCTGGAGATTGAGATCGACGGCCGGCGCGAGCC CATTGATGCCTATGCCGCTCTCGTCACCAACAATGCCTTCGATGCGCCCGGCTGGCATCGCTCGCGCCTCGACACCGGGC TGCTGGAAATCCACGTGGCCGAGGAGCGCGGCGCCCTGGCGCGGTTGAAGGCGGGTGCCGACCTCATCGTGGAGAACTGG CGCAACAATCCCGGCATCCGCTCCTTCCAGGCGCACACCGTGACCATTCACGGGCTGAAGCGGCGGCGCGCCTGGGTGGC GACCGACGGCGAAGTGACGCGGGAAACGCTGCCGTTGCGCTATGAGGTGCGGCCGAAGGCGCTGACGCTGCTCATTCCGG AGGCCGCGATCCAGTGGGCGGAACGCCCCGACGGCGCTGCCAGCCCGGCGGCGGTGGCCTGA
Upstream 100 bases:
>100_bases TTTCGCCGCTCAAGGCTGATCACTGGGAACATGACGTAAGGGCGCCGCCCGCCGGAACCGGAGTGGGCAGGCGGAGGTTC TCCGCGCTGGGAGACGAGAC
Downstream 100 bases:
>100_bases CGCCGCCGCGCCTCTTCCCAGGGTGATTCCGGCCCCTTCCGGGGCCGGCAGGCCCTCAGCGGGGCTCGATCTCATAGACG ATGGACACCTGCGCCCGCAC
Product: sphingosine kinase and enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MGRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGYDTLIVGAGDGTVSYAASVLA GSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPMRVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFG WLWALWRAVFRSGRLSLEIEIDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWAERPDGAASPAAVA
Sequences:
>Translated_313_residues MGRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGYDTLIVGAGDGTVSYAASVLA GSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPMRVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFG WLWALWRAVFRSGRLSLEIEIDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWAERPDGAASPAAVA >Mature_312_residues GRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGYDTLIVGAGDGTVSYAASVLAG SDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPMRVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFGW LWALWRAVFRSGRLSLEIEIDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENWR NNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWAERPDGAASPAAVA
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 33578; Mature: 33447
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGY CCCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCC DTLIVGAGDGTVSYAASVLAGSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPM EEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHEECCCCCCCCHHHHHHHCCCCE RVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFGWLWALWRAVFRSGRLSLEIE EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEE IDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW ECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCCCCEEEHHCCCCEEEECC RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWA CCCCCCCEEEEEEEEEEECCCCCEEEECCCCHHHHCCCEEEEECCCEEEEEECHHHHHHH ERPDGAASPAAVA CCCCCCCCCCCCC >Mature Secondary Structure GRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGY CCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCC DTLIVGAGDGTVSYAASVLAGSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPM EEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHEECCCCCCCCHHHHHHHCCCCE RVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFGWLWALWRAVFRSGRLSLEIE EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEE IDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW ECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCCCCEEEHHCCCCEEEECC RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWA CCCCCCCEEEEEEEEEEECCCCCEEEECCCCHHHHCCCEEEEECCCEEEEEECHHHHHHH ERPDGAASPAAVA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]