Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is 158318138
Identifier: 158318138
GI number: 158318138
Start: 7772815
End: 7775067
Strand: Reverse
Name: 158318138
Synonym: Franean1_6403
Alternate gene names: NA
Gene position: 7775067-7772815 (Counterclockwise)
Preceding gene: 158318139
Following gene: 158318137
Centisome position: 86.56
GC content: 74.66
Gene sequence:
>2253_bases ATGACTGTCGACTCCCCGGTCGGCGCGTCGACCGGAGGTGGTCCGACCACGGCGGACAGCACCGCCGGGACGCTCCCGGG TGCACCCGTCGACCTGGCCGACGGCACCGGTCACGCGGAGCCGTCCGGAGCGGGCACGCACGCAGGCCCACGAGCCCGGC GGTTCCGGTGGTTCCGGCAAAGCCGGCACTTCCTGCGGGTCCAGTCGTTCCGCTTCCGGTCGCCGGCCGGCGTCGTCGCT GTGGTCGCGCTCCTGTCCTTCGTCGCGAGCCTGGTCCTGCGGGCCACGCTGTACCCGGACGGCTCCGGCGACGCGGACGA GGCCGCCTACATCCTCCAGGCGCGGATGCTGCTCGAGGGGCGGCTGACCCTGGACGCGGGCGCCGTCGAACCGTTCTTCC GGCCGTGGCTGACGGGTGTGCACGACGGTCACGTGTTCACCAAGTACCTGCCCGGCTGGCCGGCGTTGCTCGCGCTGTCC CAGGTGCTGTTCGACACGATGGCCGTGGCGCCCGCCGCCGTCGCCGGGGTCTGGGTCGTCGGGACCTACCGGCTTTCCCG CGAGCTCTTCGACCATGCCTGGAGCGCGGTGGCCGCCGCTGTGGGCGTCGCGCTCTCACCGCTGGTCCTCCTGCATACGG CACTGCCACTCGCCTACGCCCCGGGGGCGGCCGTGCTCGTCCTGGCCAGCGCGGAGCTGTTGCGCGGTGCACGGACGGGG GCGCGGGCCGCCCTGGCCGGCGGCGGCGCGGGCCTGGGGCTGGTGCTGCTGATCCGGCCGTTCGACGTCGTGCTCGTGCT CCTCCCGCTGGCCGCGCTCGCGGCCGCGCGGCGCCGGCGGGAGCTCGGGACGCTGCTGCGGCGCTCGGGCTGGGCGGTGC TCGGCGCACTGCCCCTGGTCACCGCCCTGCTCGCCTACTGCTGGCGGGTCACCGGATCGCCCCTGCGTATGCCGCTGTCG GCCTCGGACCCACTGGACCGGTTCGGTTTCGGCCCGCGCCGGATCCTGCCGTCCGAGTCGAGTTTCCTGTTCACCCGCCG GCTGGCGCTCGACGCCCTCCAGGAGACGCTCGAGGTGGCGCCGAGCTGGTTCTTCGGCGGTGCCGCGCTGATCGCGCTGG CCGCCGTCGGCCTGGTGGCGCCGCGGCGGCGACTCGAGCGCCTGTTCCTGCTCGCGACGACGGGCGTGGTGCTGGCCGGC TACACGTTCTGGTGGGGGTCGGCGTTCGCCATGCCGGGCCTGCGCAACGGCCTCGGCCCGCACTACCATCTGGCCGCGTT CACCCCGGTCGTCATCCTCGCGGCCGACGGCGCCCGATGGCTGTGGACGTTCCTCCCGGCACAGTTGCCGCTGTTCCGCC GCCCGGGGGCATCCGTGCCGGGTACCGCGCGCGGCCTGGCCTGGCGCATGGTCCGTCCGGGGGCTGTAGCGCTCGCCGTC GCCGGGCTCGTCGCGATCACGGTGCCGACCCTGCAGCCCCGGATCGACGTGCAGCGCGGGGTCAACGAGGGCAACGACTT CCTGGCCGCGCTGCTCCCGGACAACCTGGGCGGGCCGGCCGTGGTGCTGGTGACGCCGACAGTCCCGAGCCGCTACACGC AGGTTCCCTACCATTCGCTGCGGAACTCCCCCGACCTCGACGGACCTGTCGTCTTCGCGGCGGACATCGGGCCGGGCTCG GCCGCGCTGCCTGACCGGATGCCGGACCGGGCGATGTTCCGCCTGCGGCCGGACGAGATCGCAGACCCGGCGGTCCCGGG CAGCTTCCGGGGGTCCTTCGTGCCGCTGAGGCAGGTCACCGGGAGCCGCGTCGAGATCCGTGTACAGGTACGGATTCCCG GTGACGCTGGGACGGCACCCGTGCGGTCGGGGGATGCGCGGCTGTACGTCCGCCTCGGCGGGGAGGTCCGCACCCTGCGA ACAGCCGTCCCGGTGACGATCACGCACACGTTCGTGCTCACCACCGGTCCCGGCACCGGCCCGGACGAGATCGGGACCGC CGGCGCGTCGCTGCCCGCCGAGCTCGTCGTCGGGTTCACCGACGGCACCGGCCCGGCGAGCGGGGCCTGGGAGGAGCGGT TTCCCCTGGTACGCCGCCCCGGTGGCGACCTCTCCCTGCTCGCTCCCGGGCTGGGCTGGCGCCGACTGTCCAAGGTGGCT GGCAGCGGCGCGGCCGGCGGCGACGGCCAGTGGCTCCCGGCCACCGCGAAACCCACCTTGGACGTCTCGCTGACCGGCGC CGCTGCCCGCTGA
Upstream 100 bases:
>100_bases TGCGATCGAGGTTGAATGGGGCTGACACGGATGACCGGGAACGCGCCGCGCCGGATCACGGCACGACCATGACGGACGCC GCCGCACCCCGCCGCCGCCG
Downstream 100 bases:
>100_bases CGCCATCCGCTGACGACCGCCGCCGCCCGCTGACGGTCGCGGGCATTCGCTGACGACCGCCGGCGTCCGGTGACGGCCGC TACGACGGACTGGCCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 750; Mature: 749
Protein sequence:
>750_residues MTVDSPVGASTGGGPTTADSTAGTLPGAPVDLADGTGHAEPSGAGTHAGPRARRFRWFRQSRHFLRVQSFRFRSPAGVVA VVALLSFVASLVLRATLYPDGSGDADEAAYILQARMLLEGRLTLDAGAVEPFFRPWLTGVHDGHVFTKYLPGWPALLALS QVLFDTMAVAPAAVAGVWVVGTYRLSRELFDHAWSAVAAAVGVALSPLVLLHTALPLAYAPGAAVLVLASAELLRGARTG ARAALAGGGAGLGLVLLIRPFDVVLVLLPLAALAAARRRRELGTLLRRSGWAVLGALPLVTALLAYCWRVTGSPLRMPLS ASDPLDRFGFGPRRILPSESSFLFTRRLALDALQETLEVAPSWFFGGAALIALAAVGLVAPRRRLERLFLLATTGVVLAG YTFWWGSAFAMPGLRNGLGPHYHLAAFTPVVILAADGARWLWTFLPAQLPLFRRPGASVPGTARGLAWRMVRPGAVALAV AGLVAITVPTLQPRIDVQRGVNEGNDFLAALLPDNLGGPAVVLVTPTVPSRYTQVPYHSLRNSPDLDGPVVFAADIGPGS AALPDRMPDRAMFRLRPDEIADPAVPGSFRGSFVPLRQVTGSRVEIRVQVRIPGDAGTAPVRSGDARLYVRLGGEVRTLR TAVPVTITHTFVLTTGPGTGPDEIGTAGASLPAELVVGFTDGTGPASGAWEERFPLVRRPGGDLSLLAPGLGWRRLSKVA GSGAAGGDGQWLPATAKPTLDVSLTGAAAR
Sequences:
>Translated_750_residues MTVDSPVGASTGGGPTTADSTAGTLPGAPVDLADGTGHAEPSGAGTHAGPRARRFRWFRQSRHFLRVQSFRFRSPAGVVA VVALLSFVASLVLRATLYPDGSGDADEAAYILQARMLLEGRLTLDAGAVEPFFRPWLTGVHDGHVFTKYLPGWPALLALS QVLFDTMAVAPAAVAGVWVVGTYRLSRELFDHAWSAVAAAVGVALSPLVLLHTALPLAYAPGAAVLVLASAELLRGARTG ARAALAGGGAGLGLVLLIRPFDVVLVLLPLAALAAARRRRELGTLLRRSGWAVLGALPLVTALLAYCWRVTGSPLRMPLS ASDPLDRFGFGPRRILPSESSFLFTRRLALDALQETLEVAPSWFFGGAALIALAAVGLVAPRRRLERLFLLATTGVVLAG YTFWWGSAFAMPGLRNGLGPHYHLAAFTPVVILAADGARWLWTFLPAQLPLFRRPGASVPGTARGLAWRMVRPGAVALAV AGLVAITVPTLQPRIDVQRGVNEGNDFLAALLPDNLGGPAVVLVTPTVPSRYTQVPYHSLRNSPDLDGPVVFAADIGPGS AALPDRMPDRAMFRLRPDEIADPAVPGSFRGSFVPLRQVTGSRVEIRVQVRIPGDAGTAPVRSGDARLYVRLGGEVRTLR TAVPVTITHTFVLTTGPGTGPDEIGTAGASLPAELVVGFTDGTGPASGAWEERFPLVRRPGGDLSLLAPGLGWRRLSKVA GSGAAGGDGQWLPATAKPTLDVSLTGAAAR >Mature_749_residues TVDSPVGASTGGGPTTADSTAGTLPGAPVDLADGTGHAEPSGAGTHAGPRARRFRWFRQSRHFLRVQSFRFRSPAGVVAV VALLSFVASLVLRATLYPDGSGDADEAAYILQARMLLEGRLTLDAGAVEPFFRPWLTGVHDGHVFTKYLPGWPALLALSQ VLFDTMAVAPAAVAGVWVVGTYRLSRELFDHAWSAVAAAVGVALSPLVLLHTALPLAYAPGAAVLVLASAELLRGARTGA RAALAGGGAGLGLVLLIRPFDVVLVLLPLAALAAARRRRELGTLLRRSGWAVLGALPLVTALLAYCWRVTGSPLRMPLSA SDPLDRFGFGPRRILPSESSFLFTRRLALDALQETLEVAPSWFFGGAALIALAAVGLVAPRRRLERLFLLATTGVVLAGY TFWWGSAFAMPGLRNGLGPHYHLAAFTPVVILAADGARWLWTFLPAQLPLFRRPGASVPGTARGLAWRMVRPGAVALAVA GLVAITVPTLQPRIDVQRGVNEGNDFLAALLPDNLGGPAVVLVTPTVPSRYTQVPYHSLRNSPDLDGPVVFAADIGPGSA ALPDRMPDRAMFRLRPDEIADPAVPGSFRGSFVPLRQVTGSRVEIRVQVRIPGDAGTAPVRSGDARLYVRLGGEVRTLRT AVPVTITHTFVLTTGPGTGPDEIGTAGASLPAELVVGFTDGTGPASGAWEERFPLVRRPGGDLSLLAPGLGWRRLSKVAG SGAAGGDGQWLPATAKPTLDVSLTGAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78547; Mature: 78416
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDSPVGASTGGGPTTADSTAGTLPGAPVDLADGTGHAEPSGAGTHAGPRARRFRWFRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH SRHFLRVQSFRFRSPAGVVAVVALLSFVASLVLRATLYPDGSGDADEAAYILQARMLLEG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC RLTLDAGAVEPFFRPWLTGVHDGHVFTKYLPGWPALLALSQVLFDTMAVAPAAVAGVWVV CEEECCCCCCHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE GTYRLSRELFDHAWSAVAAAVGVALSPLVLLHTALPLAYAPGAAVLVLASAELLRGARTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCC ARAALAGGGAGLGLVLLIRPFDVVLVLLPLAALAAARRRRELGTLLRRSGWAVLGALPLV CCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TALLAYCWRVTGSPLRMPLSASDPLDRFGFGPRRILPSESSFLFTRRLALDALQETLEVA HHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHC PSWFFGGAALIALAAVGLVAPRRRLERLFLLATTGVVLAGYTFWWGSAFAMPGLRNGLGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHCCCCC HYHLAAFTPVVILAADGARWLWTFLPAQLPLFRRPGASVPGTARGLAWRMVRPGAVALAV CEEHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH AGLVAITVPTLQPRIDVQRGVNEGNDFLAALLPDNLGGPAVVLVTPTVPSRYTQVPYHSL HHHHHEEECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH RNSPDLDGPVVFAADIGPGSAALPDRMPDRAMFRLRPDEIADPAVPGSFRGSFVPLRQVT CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCEEEHHHCC GSRVEIRVQVRIPGDAGTAPVRSGDARLYVRLGGEVRTLRTAVPVTITHTFVLTTGPGTG CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEHHEECCEEEEEEEEEECCCCCC PDEIGTAGASLPAELVVGFTDGTGPASGAWEERFPLVRRPGGDLSLLAPGLGWRRLSKVA HHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCHHCCCCCCEEEECCCCCHHHHHHHH GSGAAGGDGQWLPATAKPTLDVSLTGAAAR CCCCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure TVDSPVGASTGGGPTTADSTAGTLPGAPVDLADGTGHAEPSGAGTHAGPRARRFRWFRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH SRHFLRVQSFRFRSPAGVVAVVALLSFVASLVLRATLYPDGSGDADEAAYILQARMLLEG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC RLTLDAGAVEPFFRPWLTGVHDGHVFTKYLPGWPALLALSQVLFDTMAVAPAAVAGVWVV CEEECCCCCCHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE GTYRLSRELFDHAWSAVAAAVGVALSPLVLLHTALPLAYAPGAAVLVLASAELLRGARTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCC ARAALAGGGAGLGLVLLIRPFDVVLVLLPLAALAAARRRRELGTLLRRSGWAVLGALPLV CCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TALLAYCWRVTGSPLRMPLSASDPLDRFGFGPRRILPSESSFLFTRRLALDALQETLEVA HHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHC PSWFFGGAALIALAAVGLVAPRRRLERLFLLATTGVVLAGYTFWWGSAFAMPGLRNGLGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHCCCCC HYHLAAFTPVVILAADGARWLWTFLPAQLPLFRRPGASVPGTARGLAWRMVRPGAVALAV CEEHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH AGLVAITVPTLQPRIDVQRGVNEGNDFLAALLPDNLGGPAVVLVTPTVPSRYTQVPYHSL HHHHHEEECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH RNSPDLDGPVVFAADIGPGSAALPDRMPDRAMFRLRPDEIADPAVPGSFRGSFVPLRQVT CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCEEEHHHCC GSRVEIRVQVRIPGDAGTAPVRSGDARLYVRLGGEVRTLRTAVPVTITHTFVLTTGPGTG CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEHHEECCEEEEEEEEEECCCCCC PDEIGTAGASLPAELVVGFTDGTGPASGAWEERFPLVRRPGGDLSLLAPGLGWRRLSKVA HHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCHHCCCCCCEEEECCCCCHHHHHHHH GSGAAGGDGQWLPATAKPTLDVSLTGAAAR CCCCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA