Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is 158318139
Identifier: 158318139
GI number: 158318139
Start: 7775549
End: 7775851
Strand: Reverse
Name: 158318139
Synonym: Franean1_6404
Alternate gene names: NA
Gene position: 7775851-7775549 (Counterclockwise)
Preceding gene: 158318142
Following gene: 158318138
Centisome position: 86.57
GC content: 66.34
Gene sequence:
>303_bases GTGGCCGGCATGGGACGTATCCTCTCGCGGGCGGGGGTGACGGCGACCTGTGTGTCGCTGCTGGTACTCCTGTCCGGATG CGGCGACGACGACAAGCGGGGGATGGGTGACGCGCCCGTCCTGAACCGGCGCGGGGATGACACGCCGGCCGAGGTGTTCA ATTTCCCGGATCACTTCGGGAACCTGGCCACGAAATGCGTCGGCCACGGCCTTCGCGGCTACACCACCACACATTTCGCC GACGACGACGGCTACATTCCCTCGGCCAACACCAAGATTGTCCCGGACCCGGACTGCCGATGA
Upstream 100 bases:
>100_bases GCGCACGTCGTCCCAGGTCGCCATGGCCACACCGTATGCCCGCGGTTCGGTCACGTCGCGGAGGAGACAATCGCACGGGT CGGGGTGATCCGGAGGGATA
Downstream 100 bases:
>100_bases TCTGAGGCCGGGCCGCCGGGCCGCCGGGCCGCCGGGCCGCCGGGCCGGACAGTGACCGAGGCGCCACGGCGACCGTGCCA CCCATGTCGGTCGGCCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MAGMGRILSRAGVTATCVSLLVLLSGCGDDDKRGMGDAPVLNRRGDDTPAEVFNFPDHFGNLATKCVGHGLRGYTTTHFA DDDGYIPSANTKIVPDPDCR
Sequences:
>Translated_100_residues MAGMGRILSRAGVTATCVSLLVLLSGCGDDDKRGMGDAPVLNRRGDDTPAEVFNFPDHFGNLATKCVGHGLRGYTTTHFA DDDGYIPSANTKIVPDPDCR >Mature_99_residues AGMGRILSRAGVTATCVSLLVLLSGCGDDDKRGMGDAPVLNRRGDDTPAEVFNFPDHFGNLATKCVGHGLRGYTTTHFAD DDGYIPSANTKIVPDPDCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10584; Mature: 10453
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMGRILSRAGVTATCVSLLVLLSGCGDDDKRGMGDAPVLNRRGDDTPAEVFNFPDHFG CCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH NLATKCVGHGLRGYTTTHFADDDGYIPSANTKIVPDPDCR HHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGMGRILSRAGVTATCVSLLVLLSGCGDDDKRGMGDAPVLNRRGDDTPAEVFNFPDHFG CCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH NLATKCVGHGLRGYTTTHFADDDGYIPSANTKIVPDPDCR HHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA