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The map label for this gene is yniC [H]

Identifier: 158313689

GI number: 158313689

Start: 2224599

End: 2225306

Strand: Direct

Name: yniC [H]

Synonym: Franean1_1853

Alternate gene names: 158313689

Gene position: 2224599-2225306 (Clockwise)

Preceding gene: 158313688

Following gene: 158313690

Centisome position: 24.77

GC content: 75.28

Gene sequence:

>708_bases
GTGGCTCTCCCTCCCGCGCCGGTCACCGTCCAGGCCGTCATCTTCGATCTCGACGGTGTGCTGATCGATTCTGAGCAGGT
GTGGGATGAGGTCCGGCGGGCCTTCGTGGCCGAGCGCGGGGGCCGCTGGGCGGCCGACAGCACCGCCCTGATGATGGGGA
TGTCCACCGCGGAGTGGTCCGGGTACCTGCTCGAGCTGGGTGCCGGTGACAGCGCGGAGGAGATCGCGGCCGAGGTACGC
AGCCGGGTCGCGGCACGCTACGGCGACGCGCCGCCGCTGCTCCCGGGCGCCGTGGCGGCGGTGCGGGCGCTTGCGGAGCG
CTGGCCACTCGGCGTGGCGAGCTCGTCCCCGCGGACGCTCATCGAGCTGGTGCTGGACCGCGCCGGCCTGGCGGGGGAGT
TCCGCCAGGTCGTCTCCTCCGAGGAGGTCGCCCGGGGCAAGCCCGCGCCCGACGTATACCTGGAAGCCGTCCGCCGGATG
CGGGTGCCGGACGGCACGGCGGCCGGTGTGGTGGTCGCCGTCGAGGACTCGGCGAACGGCCTGCGGGCGGCCTCGGCCGC
GGGCCTCGCCGTCGTGGCCGTCCCGAACGAGCACTTCCCGCCCGACGCGGACGCTCTGGCGCTGGCGTCGGCCCGCGTCG
ACGGAGTCGCGGGGCTCACCGCCCAGGTCGTCCTCGCCGCCGCGGAGCACCACACGATCCGCACCTGA

Upstream 100 bases:

>100_bases
TAACCCCACTCCGAAGGACGGGGCTTGCACGCTACATTTTCCTGGTCACACTGGCCGGCACGGCCGCGCCACGGGAAGAG
CGGCCCGGCAGGATGGGCGG

Downstream 100 bases:

>100_bases
CCGGCCTGTACGACGGCCGGCCTGTACGACGACTTTCCTGACCGGCCCGGACGGCGGCTGATCTGACCGGCCTTGCCGGC
GCGTCGGCGAGGCCGCGGGA

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MALPPAPVTVQAVIFDLDGVLIDSEQVWDEVRRAFVAERGGRWAADSTALMMGMSTAEWSGYLLELGAGDSAEEIAAEVR
SRVAARYGDAPPLLPGAVAAVRALAERWPLGVASSSPRTLIELVLDRAGLAGEFRQVVSSEEVARGKPAPDVYLEAVRRM
RVPDGTAAGVVVAVEDSANGLRAASAAGLAVVAVPNEHFPPDADALALASARVDGVAGLTAQVVLAAAEHHTIRT

Sequences:

>Translated_235_residues
MALPPAPVTVQAVIFDLDGVLIDSEQVWDEVRRAFVAERGGRWAADSTALMMGMSTAEWSGYLLELGAGDSAEEIAAEVR
SRVAARYGDAPPLLPGAVAAVRALAERWPLGVASSSPRTLIELVLDRAGLAGEFRQVVSSEEVARGKPAPDVYLEAVRRM
RVPDGTAAGVVVAVEDSANGLRAASAAGLAVVAVPNEHFPPDADALALASARVDGVAGLTAQVVLAAAEHHTIRT
>Mature_234_residues
ALPPAPVTVQAVIFDLDGVLIDSEQVWDEVRRAFVAERGGRWAADSTALMMGMSTAEWSGYLLELGAGDSAEEIAAEVRS
RVAARYGDAPPLLPGAVAAVRALAERWPLGVASSSPRTLIELVLDRAGLAGEFRQVVSSEEVARGKPAPDVYLEAVRRMR
VPDGTAAGVVVAVEDSANGLRAASAAGLAVVAVPNEHFPPDADALALASARVDGVAGLTAQVVLAAAEHHTIRT

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=201, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI207113149, Length=224, Percent_Identity=28.125, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1788021, Length=226, Percent_Identity=32.3008849557522, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1789046, Length=183, Percent_Identity=29.5081967213115, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17554716, Length=208, Percent_Identity=31.7307692307692, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116008157, Length=198, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17137324, Length=193, Percent_Identity=32.6424870466321, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI20129151, Length=200, Percent_Identity=31.5, Blast_Score=81, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24393; Mature: 24262

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPPAPVTVQAVIFDLDGVLIDSEQVWDEVRRAFVAERGGRWAADSTALMMGMSTAEWS
CCCCCCCCEEEEEEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
GYLLELGAGDSAEEIAAEVRSRVAARYGDAPPLLPGAVAAVRALAERWPLGVASSSPRTL
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
IELVLDRAGLAGEFRQVVSSEEVARGKPAPDVYLEAVRRMRVPDGTAAGVVVAVEDSANG
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
LRAASAAGLAVVAVPNEHFPPDADALALASARVDGVAGLTAQVVLAAAEHHTIRT
HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALPPAPVTVQAVIFDLDGVLIDSEQVWDEVRRAFVAERGGRWAADSTALMMGMSTAEWS
CCCCCCCEEEEEEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
GYLLELGAGDSAEEIAAEVRSRVAARYGDAPPLLPGAVAAVRALAERWPLGVASSSPRTL
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
IELVLDRAGLAGEFRQVVSSEEVARGKPAPDVYLEAVRRMRVPDGTAAGVVVAVEDSANG
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
LRAASAAGLAVVAVPNEHFPPDADALALASARVDGVAGLTAQVVLAAAEHHTIRT
HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]