Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313688

Identifier: 158313688

GI number: 158313688

Start: 2224076

End: 2224501

Strand: Direct

Name: 158313688

Synonym: Franean1_1852

Alternate gene names: NA

Gene position: 2224076-2224501 (Clockwise)

Preceding gene: 158313685

Following gene: 158313689

Centisome position: 24.76

GC content: 63.85

Gene sequence:

>426_bases
ATGACGGAAGCAGACGACTACAGGCGAGGCAGACATGTGGTCTCCTCGCTGCACGCCCACTTGGTCTTCGTGACCAGGTA
TCGGCGTGGAGGACTCGACGACGCGATACTGACCCGCTGCGAACAGATCATGCGCAGCGTGTGCTCCGACTTCGGCGCAG
CCCTCACCGAGTTCAACGGAGAAGACGATCACGTCCACCTGCTGGTCGAGTACCCACCCAAGGTCGCGGTCTCCGCGCTG
GTGAACAGCCTCAAAGGCGTGTCCGCCCGACGGCTGCGCACCGAGTTCACCGACCGGGTCAACCAGCACCTCATACGCGG
CCACTTCTGGTCACCGTCCTACCTCGCAGTCTCGGCCGAAGACGCCCCACTGGCACTCGTACGCGAGTACATCGAGGAGC
AACGGCGACCAGCCCCGACCCGCTAA

Upstream 100 bases:

>100_bases
CGCAGCCGAACGCCCGCGCCAACGCCCGTGCCTGCCCCGGCCCGGGGTAGGCACGGTAGCGGTAACGAACGACTGCCACA
CCATCCAGCATATTTGGTCT

Downstream 100 bases:

>100_bases
CCCCACTCCGAAGGACGGGGCTTGCACGCTACATTTTCCTGGTCACACTGGCCGGCACGGCCGCGCCACGGGAAGAGCGG
CCCGGCAGGATGGGCGGGTG

Product: transposase IS200-family protein

Products: NA

Alternate protein names: Transposase IS; IS Element Transposase; ISSoc3 OrfA Transposase; Transposase And Inactivated Derivatives; Transposase-Related Protein; Transposase TnA; Transposase OrfA; LOW QUALITY PROTEIN Transposase; Transposition Helper Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISSoc3 Transposase; ISSoc10 OrfA Transposase; Transposase Family Protein; Transposase Related Protein; LOW QUALITY PROTEIN ISSoc3 OrfA Transposase; ISCpe2 Transposase OrfA; Transposase Repeat Family IS; Transposase ORF A; Transposase OrfA For Insertion Sequence Element

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTEADDYRRGRHVVSSLHAHLVFVTRYRRGGLDDAILTRCEQIMRSVCSDFGAALTEFNGEDDHVHLLVEYPPKVAVSAL
VNSLKGVSARRLRTEFTDRVNQHLIRGHFWSPSYLAVSAEDAPLALVREYIEEQRRPAPTR

Sequences:

>Translated_141_residues
MTEADDYRRGRHVVSSLHAHLVFVTRYRRGGLDDAILTRCEQIMRSVCSDFGAALTEFNGEDDHVHLLVEYPPKVAVSAL
VNSLKGVSARRLRTEFTDRVNQHLIRGHFWSPSYLAVSAEDAPLALVREYIEEQRRPAPTR
>Mature_140_residues
TEADDYRRGRHVVSSLHAHLVFVTRYRRGGLDDAILTRCEQIMRSVCSDFGAALTEFNGEDDHVHLLVEYPPKVAVSALV
NSLKGVSARRLRTEFTDRVNQHLIRGHFWSPSYLAVSAEDAPLALVREYIEEQRRPAPTR

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16059; Mature: 15928

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEADDYRRGRHVVSSLHAHLVFVTRYRRGGLDDAILTRCEQIMRSVCSDFGAALTEFNG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDDHVHLLVEYPPKVAVSALVNSLKGVSARRLRTEFTDRVNQHLIRGHFWSPSYLAVSAE
CCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
DAPLALVREYIEEQRRPAPTR
CCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TEADDYRRGRHVVSSLHAHLVFVTRYRRGGLDDAILTRCEQIMRSVCSDFGAALTEFNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDDHVHLLVEYPPKVAVSALVNSLKGVSARRLRTEFTDRVNQHLIRGHFWSPSYLAVSAE
CCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
DAPLALVREYIEEQRRPAPTR
CCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA