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The map label for this gene is 157963504

Identifier: 157963504

GI number: 157963504

Start: 4492257

End: 4492913

Strand: Direct

Name: 157963504

Synonym: Spea_3692

Alternate gene names: NA

Gene position: 4492257-4492913 (Clockwise)

Preceding gene: 157963503

Following gene: 157963505

Centisome position: 86.81

GC content: 50.53

Gene sequence:

>657_bases
ATGCACGCCGTCGATCAAATCTTTAATGATGAAGACTTTAGCGATCAAGACTTGCAAGATGCTCGCTTCGAGCGCTGCAG
CTTCTACCACTGCCGCTTTAACCATGCCGATCTTACCGACGCAGAGTTTATTCAGTGTAAATTTATCGTACCCGGTGAAG
ATGAGGGCTGTGACTTTAGCTACGCCACCTTAACCAGTGCTAGCTTTAAGCACTGTAACTTGAGTATGGCGCTGTTTAAA
GGCGCACGCTGTTATGGCCTTGAGATGCGTGAATGTAACTTGCAAGGCAGTGATTTTAGCCGCGCAAGCTTTGCCAATTA
CATTACCCCTAAGAGTTATTTCTGCTCGGCATACATCACCGCCTGTAACTTGGCTTATGCCGACTTGAGCGAGCTGTTAT
TAGAGGAGTGCGAGCTGTTCGATAATCGCTGGCGCGGCGCTAACCTGACTGGTGCGTCGATGAAAGGCAGCGATCTAAGC
GGCGGTGAATTCTCTCCCGAGCAGTGGGGTAGCTTTGAGCTTAAGGGCGCTAACCTGACTCGTATCGAGCTCGATGGTTT
AGATCCACGCGTGGTGGAGCTCGATGGTGTGATGATCAATCAGTGGCAGCAAGAGCAGTTGCTGGCGCCGCTAGGGCTGA
TAGTGACACCTGATTAA

Upstream 100 bases:

>100_bases
TATGATAAGTAGCCAGAATAAATAGTCTTAATAAGTAGCCGCAATAAATAGTCGTAATAAATCAGCTTAAGGCTATCGCC
AACCACTAAGGAGCAGCACT

Downstream 100 bases:

>100_bases
GCAAGCCTCTTTTCGCTCAAAGTTTGTCCAGCATCAAGCTTTCGGCTATCCCTAGCCAAAGAAACCGCTCACAAGCTCAA
GCCTCAAACCATAAGCAGCA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MHAVDQIFNDEDFSDQDLQDARFERCSFYHCRFNHADLTDAEFIQCKFIVPGEDEGCDFSYATLTSASFKHCNLSMALFK
GARCYGLEMRECNLQGSDFSRASFANYITPKSYFCSAYITACNLAYADLSELLLEECELFDNRWRGANLTGASMKGSDLS
GGEFSPEQWGSFELKGANLTRIELDGLDPRVVELDGVMINQWQQEQLLAPLGLIVTPD

Sequences:

>Translated_218_residues
MHAVDQIFNDEDFSDQDLQDARFERCSFYHCRFNHADLTDAEFIQCKFIVPGEDEGCDFSYATLTSASFKHCNLSMALFK
GARCYGLEMRECNLQGSDFSRASFANYITPKSYFCSAYITACNLAYADLSELLLEECELFDNRWRGANLTGASMKGSDLS
GGEFSPEQWGSFELKGANLTRIELDGLDPRVVELDGVMINQWQQEQLLAPLGLIVTPD
>Mature_218_residues
MHAVDQIFNDEDFSDQDLQDARFERCSFYHCRFNHADLTDAEFIQCKFIVPGEDEGCDFSYATLTSASFKHCNLSMALFK
GARCYGLEMRECNLQGSDFSRASFANYITPKSYFCSAYITACNLAYADLSELLLEECELFDNRWRGANLTGASMKGSDLS
GGEFSPEQWGSFELKGANLTRIELDGLDPRVVELDGVMINQWQQEQLLAPLGLIVTPD

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 24553; Mature: 24553

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAVDQIFNDEDFSDQDLQDARFERCSFYHCRFNHADLTDAEFIQCKFIVPGEDEGCDFS
CCCHHHHCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEE
YATLTSASFKHCNLSMALFKGARCYGLEMRECNLQGSDFSRASFANYITPKSYFCSAYIT
EEEECCCCCCCCCEEHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHH
ACNLAYADLSELLLEECELFDNRWRGANLTGASMKGSDLSGGEFSPEQWGSFELKGANLT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCEEE
RIELDGLDPRVVELDGVMINQWQQEQLLAPLGLIVTPD
EEEECCCCCEEEEECCEEECCCCHHHHHCCCCEEEECC
>Mature Secondary Structure
MHAVDQIFNDEDFSDQDLQDARFERCSFYHCRFNHADLTDAEFIQCKFIVPGEDEGCDFS
CCCHHHHCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEE
YATLTSASFKHCNLSMALFKGARCYGLEMRECNLQGSDFSRASFANYITPKSYFCSAYIT
EEEECCCCCCCCCEEHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHH
ACNLAYADLSELLLEECELFDNRWRGANLTGASMKGSDLSGGEFSPEQWGSFELKGANLT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCEEE
RIELDGLDPRVVELDGVMINQWQQEQLLAPLGLIVTPD
EEEECCCCCEEEEECCEEECCCCHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]