| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963293
Identifier: 157963293
GI number: 157963293
Start: 4251227
End: 4252126
Strand: Direct
Name: 157963293
Synonym: Spea_3479
Alternate gene names: NA
Gene position: 4251227-4252126 (Clockwise)
Preceding gene: 157963292
Following gene: 157963294
Centisome position: 82.16
GC content: 47.89
Gene sequence:
>900_bases ATGACATTTTTAGAAAACTACGGCCTCACTCCAGATTTGATGATTATTCTATTCATCGATATCACTATTGCCGTGCTGCT ACTGACATTAATGCGCTACCTGCAAGGGTGGACGGTAAAGGTCGATAGCCGCCATGAACTGGCTGAAAACGATAACTTTG CCTTCGGTATTAGCACCGCGGGTGCCGTGATGGCGTTGGGTATCGTGTTAACTGGCGCGATTACCGGTGAAGCCGCTGAG TCGTACTTAGTCGAGGCTATAGGCATGACAGCCTACGGCTTATTTGGTCTAATATTGATTAAACTCGGTCGTTTCCTACA CGATAAAATTGCACTTAATAATATCGATAAAAACGCGCTAATTATTAAGGGCAACCTCTCGGTCGCCATCGTCGATGCCA CAGCCGCGATCGCCACCGCAATCATCATCCGCTCGGTATTAATGTGGGCTGAAGACCTTACCGTCTACACCTTTATCGCC ATCTTTAGTGCCTTTGCGATTTCACAGCTAATGTTAGTGTTACTGACGCGTGGCCGTGAGAACCGCTACGCCAAGCGTAA CCAAGGTGCATCGATGCAAAAAGCGATTGCTGAAGGCCATGTTGCGCTAGCGATCCGCCATAGCGGCTATATGCTTGCCA TGGCCTTTAGCTTCAATGCCGCGAGTCACTTCATCATCTTTGATCCACAAGCCTACGTGGCTAACTTGATCGGCTGGCTG ATCTTCTCAGTGGTAATGCTACTTTCTCTATCGCTACTTATCACCTTGGTCAAGAAACTGGTACTGGCCAAGATTAACCT GTGTGAAGAAGTCGAGAAACAACACAACATAGGTTTAGCCTTCGTCGAGGTCGCAATTAGCGTCTCTATCGCGATAATCT TGGCAGCCTTGATGGCCTAA
Upstream 100 bases:
>100_bases AGCAAGTTCCGCTCTAACTACTCCAAGGACAGCAGCTTCCGTAATTCCAGCAGTCGTACCACTCGCGGTGTTCGCCGAGG CAAATAATTAAGGAACCCTT
Downstream 100 bases:
>100_bases GCAGAATAATAAAGGGAGCGCTTAATACGCTCCCTTTTCTATTACTTATTTCGTCATCATCCATTAAAACGATCTCTCAC AAAACCATCTCTAATAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTFLENYGLTPDLMIILFIDITIAVLLLTLMRYLQGWTVKVDSRHELAENDNFAFGISTAGAVMALGIVLTGAITGEAAE SYLVEAIGMTAYGLFGLILIKLGRFLHDKIALNNIDKNALIIKGNLSVAIVDATAAIATAIIIRSVLMWAEDLTVYTFIA IFSAFAISQLMLVLLTRGRENRYAKRNQGASMQKAIAEGHVALAIRHSGYMLAMAFSFNAASHFIIFDPQAYVANLIGWL IFSVVMLLSLSLLITLVKKLVLAKINLCEEVEKQHNIGLAFVEVAISVSIAIILAALMA
Sequences:
>Translated_299_residues MTFLENYGLTPDLMIILFIDITIAVLLLTLMRYLQGWTVKVDSRHELAENDNFAFGISTAGAVMALGIVLTGAITGEAAE SYLVEAIGMTAYGLFGLILIKLGRFLHDKIALNNIDKNALIIKGNLSVAIVDATAAIATAIIIRSVLMWAEDLTVYTFIA IFSAFAISQLMLVLLTRGRENRYAKRNQGASMQKAIAEGHVALAIRHSGYMLAMAFSFNAASHFIIFDPQAYVANLIGWL IFSVVMLLSLSLLITLVKKLVLAKINLCEEVEKQHNIGLAFVEVAISVSIAIILAALMA >Mature_298_residues TFLENYGLTPDLMIILFIDITIAVLLLTLMRYLQGWTVKVDSRHELAENDNFAFGISTAGAVMALGIVLTGAITGEAAES YLVEAIGMTAYGLFGLILIKLGRFLHDKIALNNIDKNALIIKGNLSVAIVDATAAIATAIIIRSVLMWAEDLTVYTFIAI FSAFAISQLMLVLLTRGRENRYAKRNQGASMQKAIAEGHVALAIRHSGYMLAMAFSFNAASHFIIFDPQAYVANLIGWLI FSVVMLLSLSLLITLVKKLVLAKINLCEEVEKQHNIGLAFVEVAISVSIAIILAALMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32510; Mature: 32379
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLENYGLTPDLMIILFIDITIAVLLLTLMRYLQGWTVKVDSRHELAENDNFAFGISTA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCCEEEEECHH GAVMALGIVLTGAITGEAAESYLVEAIGMTAYGLFGLILIKLGRFLHDKIALNNIDKNAL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IIKGNLSVAIVDATAAIATAIIIRSVLMWAEDLTVYTFIAIFSAFAISQLMLVLLTRGRE EEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NRYAKRNQGASMQKAIAEGHVALAIRHSGYMLAMAFSFNAASHFIIFDPQAYVANLIGWL CCHHHHCCCCHHHHHHHCCCEEEEEEECCEEEEEEEECCCCCEEEEECCHHHHHHHHHHH IFSVVMLLSLSLLITLVKKLVLAKINLCEEVEKQHNIGLAFVEVAISVSIAIILAALMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TFLENYGLTPDLMIILFIDITIAVLLLTLMRYLQGWTVKVDSRHELAENDNFAFGISTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCCEEEEECHH GAVMALGIVLTGAITGEAAESYLVEAIGMTAYGLFGLILIKLGRFLHDKIALNNIDKNAL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IIKGNLSVAIVDATAAIATAIIIRSVLMWAEDLTVYTFIAIFSAFAISQLMLVLLTRGRE EEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NRYAKRNQGASMQKAIAEGHVALAIRHSGYMLAMAFSFNAASHFIIFDPQAYVANLIGWL CCHHHHCCCCHHHHHHHCCCEEEEEEECCEEEEEEEECCCCCEEEEECCHHHHHHHHHHH IFSVVMLLSLSLLITLVKKLVLAKINLCEEVEKQHNIGLAFVEVAISVSIAIILAALMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA