| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963292
Identifier: 157963292
GI number: 157963292
Start: 4250254
End: 4251213
Strand: Direct
Name: 157963292
Synonym: Spea_3478
Alternate gene names: NA
Gene position: 4250254-4251213 (Clockwise)
Preceding gene: 157963288
Following gene: 157963293
Centisome position: 82.14
GC content: 50.0
Gene sequence:
>960_bases ATGGCAGGAATGCTAATCCGCGTTCTCACCGTCTTAATGGTATTCGCCCTCGCAGGATGTGGCGATGATAGACCAGAGCA AATTGCTAAGTATCAGCAGCTCACTCAGCAACGCTTAGATACTCTTAGCACTATGCTTAATGACGGTCAGGTACGTAACG CTAATTTGCTCAAACAATACGTACAAGTATTGGAGAAGCAAAAGCCCGACTTAAGCCCTTTGCTTAATGAGTTGGCTATG GACGCAACTAATCGCGGACCTATGTTTACCTCGCTCACGCGGCGCTTAACCGATACCCAGAATCCGGCTAACTATATCGA TCTCGATCAGCAATTGGCCGAAGTCGAAAACCTGTATCAAGCCGCAGACCCAAGTTTATACAACGATATGTTGTCTGATC CACTTAACGTGGTTGCCGACATGTCTGACGGGGCTCTGGCGCGAGTTAACTCCATTAGCCGTGAAGCCGCTGCTCTAGCC AATGGCGCGGAAGACTTTGGTGCGGGCAGTCAGCTTGTTGGTAATCCCTCTTACGGTAGCTGGCAGACAGGCTCTAATGG CATGTCATTTTGGGCTTGGTATGGCATGTACTCCATGTTCTCAAATCTGACCCGTGGCCCAATTGGCTATGACAGATGGT CGAGCCGTCGTAACTACAGTTACTACAACGATGTGGGACGCTACCGCTATACCTCGCCTAAGCAAGCTCGCGCGCAAACA CAAACCTATGAGCGCACTAAGAAGCAGTTTAGTTCTCAAGGACGTAAGTTTGATAGCCCGTATGCTAAGTCGCGCACAGG CTCAACCAGTCTTTCGAGACAGAGTAGTAGTACCCCAAAAGCCAGTTCAACAGGACGCACTGCGAGCAGTAAAAGCAAGT TCCGCTCTAACTACTCCAAGGACAGCAGCTTCCGTAATTCCAGCAGTCGTACCACTCGCGGTGTTCGCCGAGGCAAATAA
Upstream 100 bases:
>100_bases AATGAGCTAAGATAGCAACAGCATTTTAGGCCAAGATATCCTGGTGTTGTGTAATATAGGTTTGGCCACTTTGAGTAAAA TAACCGAATTTGGAGAAACT
Downstream 100 bases:
>100_bases TTAAGGAACCCTTATGACATTTTTAGAAAACTACGGCCTCACTCCAGATTTGATGATTATTCTATTCATCGATATCACTA TTGCCGTGCTGCTACTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQYVQVLEKQKPDLSPLLNELAM DATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQAADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALA NGAEDFGAGSQLVGNPSYGSWQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSKDSSFRNSSSRTTRGVRRGK
Sequences:
>Translated_319_residues MAGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQYVQVLEKQKPDLSPLLNELAM DATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQAADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALA NGAEDFGAGSQLVGNPSYGSWQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSKDSSFRNSSSRTTRGVRRGK >Mature_318_residues AGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQYVQVLEKQKPDLSPLLNELAMD ATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQAADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALAN GAEDFGAGSQLVGNPSYGSWQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQTQ TYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSKDSSFRNSSSRTTRGVRRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35584; Mature: 35453
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQY CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VQVLEKQKPDLSPLLNELAMDATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQ HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALANGAEDFGAGSQLVGNPSYGS HCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC WQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSK HHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC DSSFRNSSSRTTRGVRRGK CHHHCCCCHHHHHHHHCCC >Mature Secondary Structure AGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQY CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VQVLEKQKPDLSPLLNELAMDATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQ HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALANGAEDFGAGSQLVGNPSYGS HCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC WQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSK HHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC DSSFRNSSSRTTRGVRRGK CHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA