Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963292

Identifier: 157963292

GI number: 157963292

Start: 4250254

End: 4251213

Strand: Direct

Name: 157963292

Synonym: Spea_3478

Alternate gene names: NA

Gene position: 4250254-4251213 (Clockwise)

Preceding gene: 157963288

Following gene: 157963293

Centisome position: 82.14

GC content: 50.0

Gene sequence:

>960_bases
ATGGCAGGAATGCTAATCCGCGTTCTCACCGTCTTAATGGTATTCGCCCTCGCAGGATGTGGCGATGATAGACCAGAGCA
AATTGCTAAGTATCAGCAGCTCACTCAGCAACGCTTAGATACTCTTAGCACTATGCTTAATGACGGTCAGGTACGTAACG
CTAATTTGCTCAAACAATACGTACAAGTATTGGAGAAGCAAAAGCCCGACTTAAGCCCTTTGCTTAATGAGTTGGCTATG
GACGCAACTAATCGCGGACCTATGTTTACCTCGCTCACGCGGCGCTTAACCGATACCCAGAATCCGGCTAACTATATCGA
TCTCGATCAGCAATTGGCCGAAGTCGAAAACCTGTATCAAGCCGCAGACCCAAGTTTATACAACGATATGTTGTCTGATC
CACTTAACGTGGTTGCCGACATGTCTGACGGGGCTCTGGCGCGAGTTAACTCCATTAGCCGTGAAGCCGCTGCTCTAGCC
AATGGCGCGGAAGACTTTGGTGCGGGCAGTCAGCTTGTTGGTAATCCCTCTTACGGTAGCTGGCAGACAGGCTCTAATGG
CATGTCATTTTGGGCTTGGTATGGCATGTACTCCATGTTCTCAAATCTGACCCGTGGCCCAATTGGCTATGACAGATGGT
CGAGCCGTCGTAACTACAGTTACTACAACGATGTGGGACGCTACCGCTATACCTCGCCTAAGCAAGCTCGCGCGCAAACA
CAAACCTATGAGCGCACTAAGAAGCAGTTTAGTTCTCAAGGACGTAAGTTTGATAGCCCGTATGCTAAGTCGCGCACAGG
CTCAACCAGTCTTTCGAGACAGAGTAGTAGTACCCCAAAAGCCAGTTCAACAGGACGCACTGCGAGCAGTAAAAGCAAGT
TCCGCTCTAACTACTCCAAGGACAGCAGCTTCCGTAATTCCAGCAGTCGTACCACTCGCGGTGTTCGCCGAGGCAAATAA

Upstream 100 bases:

>100_bases
AATGAGCTAAGATAGCAACAGCATTTTAGGCCAAGATATCCTGGTGTTGTGTAATATAGGTTTGGCCACTTTGAGTAAAA
TAACCGAATTTGGAGAAACT

Downstream 100 bases:

>100_bases
TTAAGGAACCCTTATGACATTTTTAGAAAACTACGGCCTCACTCCAGATTTGATGATTATTCTATTCATCGATATCACTA
TTGCCGTGCTGCTACTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQYVQVLEKQKPDLSPLLNELAM
DATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQAADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALA
NGAEDFGAGSQLVGNPSYGSWQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT
QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSKDSSFRNSSSRTTRGVRRGK

Sequences:

>Translated_319_residues
MAGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQYVQVLEKQKPDLSPLLNELAM
DATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQAADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALA
NGAEDFGAGSQLVGNPSYGSWQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT
QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSKDSSFRNSSSRTTRGVRRGK
>Mature_318_residues
AGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQYVQVLEKQKPDLSPLLNELAMD
ATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQAADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALAN
GAEDFGAGSQLVGNPSYGSWQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQTQ
TYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSKDSSFRNSSSRTTRGVRRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35584; Mature: 35453

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQY
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VQVLEKQKPDLSPLLNELAMDATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQ
HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALANGAEDFGAGSQLVGNPSYGS
HCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
WQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH
QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSK
HHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
DSSFRNSSSRTTRGVRRGK
CHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AGMLIRVLTVLMVFALAGCGDDRPEQIAKYQQLTQQRLDTLSTMLNDGQVRNANLLKQY
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VQVLEKQKPDLSPLLNELAMDATNRGPMFTSLTRRLTDTQNPANYIDLDQQLAEVENLYQ
HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AADPSLYNDMLSDPLNVVADMSDGALARVNSISREAAALANGAEDFGAGSQLVGNPSYGS
HCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
WQTGSNGMSFWAWYGMYSMFSNLTRGPIGYDRWSSRRNYSYYNDVGRYRYTSPKQARAQT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH
QTYERTKKQFSSQGRKFDSPYAKSRTGSTSLSRQSSSTPKASSTGRTASSKSKFRSNYSK
HHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
DSSFRNSSSRTTRGVRRGK
CHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA