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The map label for this gene is yhcM [H]

Identifier: 157963266

GI number: 157963266

Start: 4220681

End: 4221202

Strand: Direct

Name: yhcM [H]

Synonym: Spea_3452

Alternate gene names: 157963266

Gene position: 4220681-4221202 (Clockwise)

Preceding gene: 157963265

Following gene: 157963272

Centisome position: 81.57

GC content: 49.04

Gene sequence:

>522_bases
ATGACCCGCCAAGCTGCTAACCTGTTGAGCCAACAGCAACAATTAATTGTCAGAGATGCTGAGACCAGTGTTGATGCCTG
TACTGGTGTTGATCTTAATATTGCACGCCGCGGGCCCCTCGCGCGCTATCAAGACCTGGTCGAGCAGCAACAGATTATCG
ACGACGGCGCGCAGCACCAAGCCATAGCAGCACTGGAACGATTGCATCGGCAGCTCATTCAAGTGCCTCACACTCAGCAG
CCTAGCCATGTTCATCCAGAGTGTCAGGGGATCTACATGTGGGGGGATGTCGGCCGCGGCAAAACCTACTTGATGGATCT
GTTCTATCAAAGCCTTGAATGTGAAAGTGAAAGCGAATCTAAAACTGAAGTCCCCAAGCTCAGGCTGCACTTTCATCGTT
TTATGGCGCGCATTCACAAAGAGCTGATTAGTGAGGCGGCGTCTCTAATCACATCTATCAAATCTCAATTAATGTTACAC
GTGTTGCCAGTAAAGGGTTTTACTGGTGTAACAAAAATATGA

Upstream 100 bases:

>100_bases
TGGAGCATAAATTATTAAATTTACTCACATTGACTGTTCCCCAATAGATGAGCGCGAGCTGATATAATCCTTAGCATCTC
CAAGCCAGTAATGGAATGCT

Downstream 100 bases:

>100_bases
CTTAAACTCATTGTCTCTCCATTCATATAACACCAATAAGTTAACTTTGTTACTAACTGTCGACTAACAATACAGTTTGA
TCAGATATGTACCTCTTTTA

Product: ATPase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTRQAANLLSQQQQLIVRDAETSVDACTGVDLNIARRGPLARYQDLVEQQQIIDDGAQHQAIAALERLHRQLIQVPHTQQ
PSHVHPECQGIYMWGDVGRGKTYLMDLFYQSLECESESESKTEVPKLRLHFHRFMARIHKELISEAASLITSIKSQLMLH
VLPVKGFTGVTKI

Sequences:

>Translated_173_residues
MTRQAANLLSQQQQLIVRDAETSVDACTGVDLNIARRGPLARYQDLVEQQQIIDDGAQHQAIAALERLHRQLIQVPHTQQ
PSHVHPECQGIYMWGDVGRGKTYLMDLFYQSLECESESESKTEVPKLRLHFHRFMARIHKELISEAASLITSIKSQLMLH
VLPVKGFTGVTKI
>Mature_172_residues
TRQAANLLSQQQQLIVRDAETSVDACTGVDLNIARRGPLARYQDLVEQQQIIDDGAQHQAIAALERLHRQLIQVPHTQQP
SHVHPECQGIYMWGDVGRGKTYLMDLFYQSLECESESESKTEVPKLRLHFHRFMARIHKELISEAASLITSIKSQLMLHV
LPVKGFTGVTKI

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=111, Percent_Identity=34.2342342342342, Blast_Score=64, Evalue=5e-11,
Organism=Escherichia coli, GI1789627, Length=122, Percent_Identity=37.7049180327869, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 19623; Mature: 19492

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQAANLLSQQQQLIVRDAETSVDACTGVDLNIARRGPLARYQDLVEQQQIIDDGAQHQ
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHH
AIAALERLHRQLIQVPHTQQPSHVHPECQGIYMWGDVGRGKTYLMDLFYQSLECESESES
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
KTEVPKLRLHFHRFMARIHKELISEAASLITSIKSQLMLHVLPVKGFTGVTKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TRQAANLLSQQQQLIVRDAETSVDACTGVDLNIARRGPLARYQDLVEQQQIIDDGAQHQ
CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHH
AIAALERLHRQLIQVPHTQQPSHVHPECQGIYMWGDVGRGKTYLMDLFYQSLECESESES
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
KTEVPKLRLHFHRFMARIHKELISEAASLITSIKSQLMLHVLPVKGFTGVTKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]