| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963241
Identifier: 157963241
GI number: 157963241
Start: 4189078
End: 4190148
Strand: Direct
Name: 157963241
Synonym: Spea_3427
Alternate gene names: NA
Gene position: 4189078-4190148 (Clockwise)
Preceding gene: 157963236
Following gene: 157963244
Centisome position: 80.95
GC content: 45.0
Gene sequence:
>1071_bases ATGACTCCTGAAATCATGGCAATGGCCAAAGATACTGCCGGCATGTTTCTATTTCTCGCGGCTGAATTAACTCTGCTGTT TCTAGCGATTAGTTATATTGTCGGCATACTACAAGAATACATTCCGCCTGAAAAAATCCAGTCGATTCTGAGTTCGAAGA AAGGCAAAGGCTATATTATTGCGGCCCTACTCGGCGCTATAACACCATTCTGCTCATGCTCAACGATTCCTTTCTTGAAA GGCTTATTAAGAGCTAAAGCAGGCTTCGGCCCTATGATGGTATTCCTGTTCTCTAGCCCGCTATTGAACCCAATTATCAT AGGCCTGTTTATCGTGACCTTCGGTTTTAAAGTGGCACTGTTTTACTTCGCCGTTGCTATGGTTGTTTCAGTCACTGCGG GTTATGTGCTGGAGAAACTAGGATTTGAGCGTTACGTTAAGCCTGAAGCTTATGAAGCAGCTGATAGCGCTAGTTGTGGT ACTAGCTGTGGCGATAGTGCAAAAGTAGAAGCGAAAGCTGAAACGAGTTGCTGCACTGCGCCAAATAAAGAAGTGGCTCC AATTGCGAACACAAGCTGCTGCTCAGCTCCTGCCGAACCAGTTAGCTGCTGTGGTACAGCAACAAGCACTTGTGGCTCAA CAGCAGTCGTAAAGGAAGACAGCCGTTGGATGCGTGTATGGCGAGCAACCTGGAAAGACTTTAAACAAGTTCTGCCTTAC TTAATGCTGGGTATTTTGCTTGGATCATTTATCTATGGCTTTATACCAACAGATCTAATCGCTAAATATGCGGGTGAAGG CACCTGGTATGCGATCCCGATTGCAGCTGTAATTGGTATCCCACTGTACATTCGTGCAGAAGCGGTTATCCCATTAAGCT CAGCGTTAGTGGCTAAAGGTATGGCGTTAGGTTCAGTTATGGCACTGATTATTGGTAGTGCGGGCGCAAGTTTAACGGAA GTGATCTTGCTGAAATCTATCTTTAAGAATCAGATGATTGCCGCATTCTTAGCTGTCATCTTAGGTATGGCGATTACTGC AGGTTATCTATACACAGTTCTTTTTGCCTAA
Upstream 100 bases:
>100_bases AATAATGGTTGACTATTTTATGAATCGGACTATTATCTCTGCAAATTCGTTATTTCGATAAAACCAGAAATAACAAACAA AGCTTATTAAGGTAAATATT
Downstream 100 bases:
>100_bases GTCTATAGTATCTCCTAACAACTAGCTTGCGAACATGCTTAATGCTCGCAAGCTCCCTTAACACTTATTTGAATTTACTA TTAACACAGTCAATCACACA
Product: permease
Products: NA
Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYIIAALLGAITPFCSCSTIPFLK GLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVALFYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCG TSCGDSAKVEAKAETSCCTAPNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKGMALGSVMALIIGSAGASLTE VILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA
Sequences:
>Translated_356_residues MTPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYIIAALLGAITPFCSCSTIPFLK GLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVALFYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCG TSCGDSAKVEAKAETSCCTAPNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKGMALGSVMALIIGSAGASLTE VILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA >Mature_355_residues TPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYIIAALLGAITPFCSCSTIPFLKG LLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVALFYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCGT SCGDSAKVEAKAETSCCTAPNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPYL MLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKGMALGSVMALIIGSAGASLTEV ILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37773; Mature: 37642
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH AALLGAITPFCSCSTIPFLKGLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVAL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCGTSCGDSAKVEAKAETSCCTA HHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCC PNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHEEEEECCCHHHHHHHHH MALGSVMALIIGSAGASLTEVILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH AALLGAITPFCSCSTIPFLKGLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVAL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCGTSCGDSAKVEAKAETSCCTA HHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCC PNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHEEEEECCCHHHHHHHHH MALGSVMALIIGSAGASLTEVILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA