| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yeaN [H]
Identifier: 157963233
GI number: 157963233
Start: 4177785
End: 4179035
Strand: Direct
Name: yeaN [H]
Synonym: Spea_3419
Alternate gene names: 157963233
Gene position: 4177785-4179035 (Clockwise)
Preceding gene: 157963230
Following gene: 157963236
Centisome position: 80.74
GC content: 47.48
Gene sequence:
>1251_bases GTGACGTTATCGCATCCTTCTCGTTTTGCCAGCAGTGCATTCTTGCTACTTGGCGTACTCTTAATCGCTATCAGCTTACG CAGCCCAATCACTGGCGTAGGACCGCTACTCGATGCCATTAGAGCCGAATTACACCTGTCTGCAACACAGGCCGGAATGC TAACAACATTACCATTATTAGCCTTTGCTTTTTTCTCACCTGTAGCCTCTAAAATCGGTGCAAAACGCGGCCTAGAACAG GGGCTAATGCTGTCGTTACTATTTATCCTTACTGGTCTAGTGGTACGTTCACTCGGTTCTACCAGCGCGCTATTTATCGG CACTGTGGTCATTGGTGCGGGAATCGCCTTCGCAAACGTACTACTGCCAAGCTTAATGAAACGTGACTTCCCGACTCGAA TAACCACCATGACCTCCATGTATGTATTGATGATGGGGGCAGGATCAGCCATGAGTGCCAGTCTAGCCATTCCATTGACT GAGATGGCTAATCAATTGTCGATAACTGTGATCCCAAGTTGGGCATTTGCCTTAGGGGCTCTCGTGATATTCCCATTAAT TGCGATTATAGTTTGGTTACCACAAATGCGTAATCACACCGCGCCAAGTCAAGATACCCAAGCATTCGATAGTCACAGTT ATCTGTGGCGTAATGCTAGCGCCTGGCAGATCACGCTGTTTTTGGCGCTCAATTCCTTCTTGATGTATATCTTTATCAGC TGGTTGCCGACAATATTGGTAGACAGTGGCTTTAGCCATCATGAAGCAGGTGTGATCCACGGTGTGCTACAGCTATTTAC AGCGGTACCCGCCTTAGTTTTAATTCCGTTTATGAATAAGTTTAACGATAAACGCCTGCTCAGCTTGAGCCTAACTTTGA TGGCATTGATAGGCATTATAGGGCTAATCGTTAAACCTGAGTTTGCCATGATTTGGGGAATGCTATTTGGCTTTGGGGCT GGTGGTGGATTTATTGTGGCGCTAGCCTTAATAAGCCTTCGAACCACTAGTGCACAGCAAGCGGCCACATTATCGGGCAT GGCACAATTCTTAGGTTACTTACTCGCTGCTACGGGCCCAATGATAATTGGCGAGTTACATGAGCTGACTGCTAACTGGC AGATACCGCTTATGCTCTGCGCTTTCTGCGCTGTGCTATGGAGTGTGTTCTCGGTTTTTGCGGCAAAGGATGAGCTCATC ACCCCCTCAGAACATGATACCCCTGCCCCATTGGTCGAAAACCTCTCATAA
Upstream 100 bases:
>100_bases AGGATGACCGTTTTTAGCAATATAGAGTCACTATAGCCCAATACTGCAATCAATTAGAAGCGTAAGCTAGCGAACTTTCA TGACTTTAAAGGAGCCTATT
Downstream 100 bases:
>100_bases CATAAAGCTAGTCCGGGAGTCTTCGCTCCTAGAACTTGGCTGTTACGCCTTAAACTAATTGGTATTATTTACGCCTAAAT CACCTGCGCTGGCGCTTTAG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTLSHPSRFASSAFLLLGVLLIAISLRSPITGVGPLLDAIRAELHLSATQAGMLTTLPLLAFAFFSPVASKIGAKRGLEQ GLMLSLLFILTGLVVRSLGSTSALFIGTVVIGAGIAFANVLLPSLMKRDFPTRITTMTSMYVLMMGAGSAMSASLAIPLT EMANQLSITVIPSWAFALGALVIFPLIAIIVWLPQMRNHTAPSQDTQAFDSHSYLWRNASAWQITLFLALNSFLMYIFIS WLPTILVDSGFSHHEAGVIHGVLQLFTAVPALVLIPFMNKFNDKRLLSLSLTLMALIGIIGLIVKPEFAMIWGMLFGFGA GGGFIVALALISLRTTSAQQAATLSGMAQFLGYLLAATGPMIIGELHELTANWQIPLMLCAFCAVLWSVFSVFAAKDELI TPSEHDTPAPLVENLS
Sequences:
>Translated_416_residues MTLSHPSRFASSAFLLLGVLLIAISLRSPITGVGPLLDAIRAELHLSATQAGMLTTLPLLAFAFFSPVASKIGAKRGLEQ GLMLSLLFILTGLVVRSLGSTSALFIGTVVIGAGIAFANVLLPSLMKRDFPTRITTMTSMYVLMMGAGSAMSASLAIPLT EMANQLSITVIPSWAFALGALVIFPLIAIIVWLPQMRNHTAPSQDTQAFDSHSYLWRNASAWQITLFLALNSFLMYIFIS WLPTILVDSGFSHHEAGVIHGVLQLFTAVPALVLIPFMNKFNDKRLLSLSLTLMALIGIIGLIVKPEFAMIWGMLFGFGA GGGFIVALALISLRTTSAQQAATLSGMAQFLGYLLAATGPMIIGELHELTANWQIPLMLCAFCAVLWSVFSVFAAKDELI TPSEHDTPAPLVENLS >Mature_415_residues TLSHPSRFASSAFLLLGVLLIAISLRSPITGVGPLLDAIRAELHLSATQAGMLTTLPLLAFAFFSPVASKIGAKRGLEQG LMLSLLFILTGLVVRSLGSTSALFIGTVVIGAGIAFANVLLPSLMKRDFPTRITTMTSMYVLMMGAGSAMSASLAIPLTE MANQLSITVIPSWAFALGALVIFPLIAIIVWLPQMRNHTAPSQDTQAFDSHSYLWRNASAWQITLFLALNSFLMYIFISW LPTILVDSGFSHHEAGVIHGVLQLFTAVPALVLIPFMNKFNDKRLLSLSLTLMALIGIIGLIVKPEFAMIWGMLFGFGAG GGFIVALALISLRTTSAQQAATLSGMAQFLGYLLAATGPMIIGELHELTANWQIPLMLCAFCAVLWSVFSVFAAKDELIT PSEHDTPAPLVENLS
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=400, Percent_Identity=43.5, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1786536, Length=373, Percent_Identity=25.4691689008043, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44581; Mature: 44450
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00136 SUBTILASE_ASP ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSHPSRFASSAFLLLGVLLIAISLRSPITGVGPLLDAIRAELHLSATQAGMLTTLPLL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAFFSPVASKIGAKRGLEQGLMLSLLFILTGLVVRSLGSTSALFIGTVVIGAGIAFANV HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLPSLMKRDFPTRITTMTSMYVLMMGAGSAMSASLAIPLTEMANQLSITVIPSWAFALGA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCEEEEEECHHHHHHHH LVIFPLIAIIVWLPQMRNHTAPSQDTQAFDSHSYLWRNASAWQITLFLALNSFLMYIFIS HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH WLPTILVDSGFSHHEAGVIHGVLQLFTAVPALVLIPFMNKFNDKRLLSLSLTLMALIGII HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GLIVKPEFAMIWGMLFGFGAGGGFIVALALISLRTTSAQQAATLSGMAQFLGYLLAATGP HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC MIIGELHELTANWQIPLMLCAFCAVLWSVFSVFAAKDELITPSEHDTPAPLVENLS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure TLSHPSRFASSAFLLLGVLLIAISLRSPITGVGPLLDAIRAELHLSATQAGMLTTLPLL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAFFSPVASKIGAKRGLEQGLMLSLLFILTGLVVRSLGSTSALFIGTVVIGAGIAFANV HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLPSLMKRDFPTRITTMTSMYVLMMGAGSAMSASLAIPLTEMANQLSITVIPSWAFALGA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCEEEEEECHHHHHHHH LVIFPLIAIIVWLPQMRNHTAPSQDTQAFDSHSYLWRNASAWQITLFLALNSFLMYIFIS HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH WLPTILVDSGFSHHEAGVIHGVLQLFTAVPALVLIPFMNKFNDKRLLSLSLTLMALIGII HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GLIVKPEFAMIWGMLFGFGAGGGFIVALALISLRTTSAQQAATLSGMAQFLGYLLAATGP HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC MIIGELHELTANWQIPLMLCAFCAVLWSVFSVFAAKDELITPSEHDTPAPLVENLS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]