| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yeiJ [C]
Identifier: 157963219
GI number: 157963219
Start: 4158870
End: 4160117
Strand: Direct
Name: yeiJ [C]
Synonym: Spea_3405
Alternate gene names: 157963219
Gene position: 4158870-4160117 (Clockwise)
Preceding gene: 157963218
Following gene: 157963220
Centisome position: 80.37
GC content: 45.27
Gene sequence:
>1248_bases ATGTTTCAATCCATATTAGGTATCGCAGCCCTACTTATCGTAGGCTACCTTTTTTGTAATGCTAAAAAACAAGTTAACTG GCGTACAGTCGGTGGCGCACTAATCATCCAGCTGACTATCGCAGGCTTTGTTCTAGCTTCCAGCTTTGGTGAAAGCGTAT TACTGGCCGTTTCTAACGGCGTGGCCAATGTACTGGGCTTTGCCGCCAAAGGTATTAGCTTTGTGTTCGGTAATCTAGTG ACCTTCCAAGTTGAGAACTTAGGCTTTATCTTCGCGTTCCAAGTATTGCCAGCAATCATTTTCACCGCCTCATTAGTCAG CTTACTGCACTACATGGGCATCATGGGCTTTGTAGTAAAAGTGCTTGGTGGCGGACTGCAAAAAATGATCGGCTCGTCTA AAGCTGAATCAATGAACGCGATTGCCAACACAGTTTGCGGCGGAACTGAAGCACCACTATTTGTTAAGCCTTGGCACCCA CACCTGACTAAATCTGAAATTTTTGCCATAATGGTCGGTGGTTTAGCATCAATCGCAGGCTCTGTATTAGCCGGTCTTGC AGGTATGGGCGTTGAAATTAAATATTTGGTTATGGCATGTTTTATGAGTGCCCCAGCAAGTTTATTATTCGCAAAATTGA TTATCCCTGAAACAGAGCAGCCGGTTAATGATGTACCTGCACTGCCTGATGATGAAAAGCCATCTAACTTTATCGATGCT ATCGCTAAAGGCGCTATCGCCGGTATGCAAATCGCAGCGGTTGTGGGTGCGCTTTTAATAGCCTGTATCGGCCTAATCGC GATGTTAAACAGCATGATCGGCTGGGCGGGTGGCTTATTTGGCTTTGAGAATGTAACTCTAGAGCTATTAATGGGCTATG CGTTTGCGCCAATCGCTTGGTTAATCGGTGTGCCTTGGGTTGAAGCGATTGTTGCAGGTAGTTTTATTGCGCAAAAACTA GTACTAAATGAATTTGTGGCTTTTGCAGGTTTTGCACCTTACATCTCAGGTGAAACCGTGGTTGCTGCAACTGGTGAAGT GATGTCACCAAAGTCTGTGGCTATCATCACCGTTGCGCTATGTGGCTTTGCTAATATCGGCTCTGTGTCTATGGTGGTTG CTGCGATAAGCACCATGATCCCTAAGCAGGCTAGCTATATTGCTTCTGTTGGCATGAAGGTACTTTTAGCTGCAACACTG GCTAACCTATTATCGGCAACCGTTGTTGGTCTATTTATGTCTTTCTAA
Upstream 100 bases:
>100_bases CATGCAGTTAGCCCAACAGCATGTTGAGCGTTTAATCCATTTAATTAATCAACTGAATGAATCAGCTTAATTAGTCAATT TTATAATAGGTCTTTCCATC
Downstream 100 bases:
>100_bases GATAGCCGATATCAAATCGTAACCCATCAATGCTTAGTCCAGATTAATCTCTGGTACTAAGCATTTTTTTAGTCTTAACT CTCACCTCTACAACCCCCCT
Product: Na+ dependent nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MFQSILGIAALLIVGYLFCNAKKQVNWRTVGGALIIQLTIAGFVLASSFGESVLLAVSNGVANVLGFAAKGISFVFGNLV TFQVENLGFIFAFQVLPAIIFTASLVSLLHYMGIMGFVVKVLGGGLQKMIGSSKAESMNAIANTVCGGTEAPLFVKPWHP HLTKSEIFAIMVGGLASIAGSVLAGLAGMGVEIKYLVMACFMSAPASLLFAKLIIPETEQPVNDVPALPDDEKPSNFIDA IAKGAIAGMQIAAVVGALLIACIGLIAMLNSMIGWAGGLFGFENVTLELLMGYAFAPIAWLIGVPWVEAIVAGSFIAQKL VLNEFVAFAGFAPYISGETVVAATGEVMSPKSVAIITVALCGFANIGSVSMVVAAISTMIPKQASYIASVGMKVLLAATL ANLLSATVVGLFMSF
Sequences:
>Translated_415_residues MFQSILGIAALLIVGYLFCNAKKQVNWRTVGGALIIQLTIAGFVLASSFGESVLLAVSNGVANVLGFAAKGISFVFGNLV TFQVENLGFIFAFQVLPAIIFTASLVSLLHYMGIMGFVVKVLGGGLQKMIGSSKAESMNAIANTVCGGTEAPLFVKPWHP HLTKSEIFAIMVGGLASIAGSVLAGLAGMGVEIKYLVMACFMSAPASLLFAKLIIPETEQPVNDVPALPDDEKPSNFIDA IAKGAIAGMQIAAVVGALLIACIGLIAMLNSMIGWAGGLFGFENVTLELLMGYAFAPIAWLIGVPWVEAIVAGSFIAQKL VLNEFVAFAGFAPYISGETVVAATGEVMSPKSVAIITVALCGFANIGSVSMVVAAISTMIPKQASYIASVGMKVLLAATL ANLLSATVVGLFMSF >Mature_415_residues MFQSILGIAALLIVGYLFCNAKKQVNWRTVGGALIIQLTIAGFVLASSFGESVLLAVSNGVANVLGFAAKGISFVFGNLV TFQVENLGFIFAFQVLPAIIFTASLVSLLHYMGIMGFVVKVLGGGLQKMIGSSKAESMNAIANTVCGGTEAPLFVKPWHP HLTKSEIFAIMVGGLASIAGSVLAGLAGMGVEIKYLVMACFMSAPASLLFAKLIIPETEQPVNDVPALPDDEKPSNFIDA IAKGAIAGMQIAAVVGALLIACIGLIAMLNSMIGWAGGLFGFENVTLELLMGYAFAPIAWLIGVPWVEAIVAGSFIAQKL VLNEFVAFAGFAPYISGETVVAATGEVMSPKSVAIITVALCGFANIGSVSMVVAAISTMIPKQASYIASVGMKVLLAATL ANLLSATVVGLFMSF
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=415, Percent_Identity=33.7349397590361, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI227116277, Length=413, Percent_Identity=30.7506053268765, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI42542381, Length=412, Percent_Identity=28.8834951456311, Blast_Score=196, Evalue=4e-50, Organism=Escherichia coli, GI1788485, Length=416, Percent_Identity=43.5096153846154, Blast_Score=310, Evalue=8e-86, Organism=Escherichia coli, GI1788488, Length=416, Percent_Identity=43.5096153846154, Blast_Score=305, Evalue=4e-84, Organism=Escherichia coli, GI1788737, Length=407, Percent_Identity=28.7469287469287, Blast_Score=176, Evalue=3e-45, Organism=Caenorhabditis elegans, GI71991794, Length=402, Percent_Identity=31.3432835820896, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17560276, Length=399, Percent_Identity=29.8245614035088, Blast_Score=187, Evalue=9e-48, Organism=Caenorhabditis elegans, GI25146537, Length=199, Percent_Identity=35.1758793969849, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI45552519, Length=405, Percent_Identity=33.3333333333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI45552517, Length=405, Percent_Identity=33.3333333333333, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI19921868, Length=405, Percent_Identity=33.3333333333333, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI281360430, Length=411, Percent_Identity=32.8467153284672, Blast_Score=211, Evalue=6e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 42948; Mature: 42948
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQSILGIAALLIVGYLFCNAKKQVNWRTVGGALIIQLTIAGFVLASSFGESVLLAVSNG CHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEHHCC VANVLGFAAKGISFVFGNLVTFQVENLGFIFAFQVLPAIIFTASLVSLLHYMGIMGFVVK HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGGGLQKMIGSSKAESMNAIANTVCGGTEAPLFVKPWHPHLTKSEIFAIMVGGLASIAG HHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH SVLAGLAGMGVEIKYLVMACFMSAPASLLFAKLIIPETEQPVNDVPALPDDEKPSNFIDA HHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH IAKGAIAGMQIAAVVGALLIACIGLIAMLNSMIGWAGGLFGFENVTLELLMGYAFAPIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LIGVPWVEAIVAGSFIAQKLVLNEFVAFAGFAPYISGETVVAATGEVMSPKSVAIITVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH CGFANIGSVSMVVAAISTMIPKQASYIASVGMKVLLAATLANLLSATVVGLFMSF HCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFQSILGIAALLIVGYLFCNAKKQVNWRTVGGALIIQLTIAGFVLASSFGESVLLAVSNG CHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEHHCC VANVLGFAAKGISFVFGNLVTFQVENLGFIFAFQVLPAIIFTASLVSLLHYMGIMGFVVK HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGGGLQKMIGSSKAESMNAIANTVCGGTEAPLFVKPWHPHLTKSEIFAIMVGGLASIAG HHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH SVLAGLAGMGVEIKYLVMACFMSAPASLLFAKLIIPETEQPVNDVPALPDDEKPSNFIDA HHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH IAKGAIAGMQIAAVVGALLIACIGLIAMLNSMIGWAGGLFGFENVTLELLMGYAFAPIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LIGVPWVEAIVAGSFIAQKLVLNEFVAFAGFAPYISGETVVAATGEVMSPKSVAIITVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH CGFANIGSVSMVVAAISTMIPKQASYIASVGMKVLLAATLANLLSATVVGLFMSF HCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]