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The map label for this gene is 157963220

Identifier: 157963220

GI number: 157963220

Start: 4160440

End: 4161102

Strand: Direct

Name: 157963220

Synonym: Spea_3406

Alternate gene names: NA

Gene position: 4160440-4161102 (Clockwise)

Preceding gene: 157963219

Following gene: 157963221

Centisome position: 80.4

GC content: 47.21

Gene sequence:

>663_bases
ATGACTCCACAAGAACAAGAACTGATTCAAAACGTAGCTGATAAATTAAAAGCTAGCCCTAACAAGCCAAAAGATGCGGA
AGCGGAAAGCTTAATCAGCCAAGAAATCGCTTCTCAAGAAGATATCGTTTACAAGCTAACTCAAGCAGTACTTGTACAAG
AGATGGCACTAAAAGAGCTTAAGTCAAAGAGTGATTTTTTACAGACTCAAGTTGAGCACTTCAGAAAAGAATCTGAGCGT
GGTGCATTAAGCCGCATGATGGGCGGTGCTAACCCAGCGCCAGTTCAGCCACAACCTGTACGTCAACCAAGTGCATTTGG
TAGCTTTATGCAAACTGCTGCGGGTGTTGCAGCAGGTATGGTTGCCGGTAACCTTATCAGCAACGCACTATTTGGCGACG
AAGCGCCAGCAACTGCAGAAGCTGCACCTGAAGTAGCTCCTGAAGCGGCTGAAACTGAAGCACCAACAGAGACAGCTGCT
GCAGATACTGCAGTGCCAGAAGATGCAGGTTCAAGCTTCTTAGACGATAACTCAGGTTTCGCTTCTGAATACAGCAGCGA
AGATACCTTTGCTAACACTGGTTTTGGCGGTGATGAAAGCTTTGGTGGCTTCGATGACGGCGGTTTCGGTGGTGACTTCG
GTGGCGACGACGAAGAGTTTTAA

Upstream 100 bases:

>100_bases
GATTAGCTGATTAATTATTAGTTATACGCACGATGTGAACCTTAAGCTAGGATGCACGTCAAATACGTAAAGACGTATCC
TTACATTTAGGAATTTGAAC

Downstream 100 bases:

>100_bases
TCTAGACTCAAGCCTTCGATAGCAAATCAGTGGTAGCCAAATGCCCTTTTCAATTTGGCCGCCACTGAATACTCTTCACT
AACTTCCTTTAACTAAATGC

Product: putative periplasmic ligand-binding sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTPQEQELIQNVADKLKASPNKPKDAEAESLISQEIASQEDIVYKLTQAVLVQEMALKELKSKSDFLQTQVEHFRKESER
GALSRMMGGANPAPVQPQPVRQPSAFGSFMQTAAGVAAGMVAGNLISNALFGDEAPATAEAAPEVAPEAAETEAPTETAA
ADTAVPEDAGSSFLDDNSGFASEYSSEDTFANTGFGGDESFGGFDDGGFGGDFGGDDEEF

Sequences:

>Translated_220_residues
MTPQEQELIQNVADKLKASPNKPKDAEAESLISQEIASQEDIVYKLTQAVLVQEMALKELKSKSDFLQTQVEHFRKESER
GALSRMMGGANPAPVQPQPVRQPSAFGSFMQTAAGVAAGMVAGNLISNALFGDEAPATAEAAPEVAPEAAETEAPTETAA
ADTAVPEDAGSSFLDDNSGFASEYSSEDTFANTGFGGDESFGGFDDGGFGGDFGGDDEEF
>Mature_219_residues
TPQEQELIQNVADKLKASPNKPKDAEAESLISQEIASQEDIVYKLTQAVLVQEMALKELKSKSDFLQTQVEHFRKESERG
ALSRMMGGANPAPVQPQPVRQPSAFGSFMQTAAGVAAGMVAGNLISNALFGDEAPATAEAAPEVAPEAAETEAPTETAAA
DTAVPEDAGSSFLDDNSGFASEYSSEDTFANTGFGGDESFGGFDDGGFGGDFGGDDEEF

Specific function: Unknown

COG id: COG3416

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23012; Mature: 22881

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQEQELIQNVADKLKASPNKPKDAEAESLISQEIASQEDIVYKLTQAVLVQEMALKEL
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSKSDFLQTQVEHFRKESERGALSRMMGGANPAPVQPQPVRQPSAFGSFMQTAAGVAAGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VAGNLISNALFGDEAPATAEAAPEVAPEAAETEAPTETAAADTAVPEDAGSSFLDDNSGF
HHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
ASEYSSEDTFANTGFGGDESFGGFDDGGFGGDFGGDDEEF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPQEQELIQNVADKLKASPNKPKDAEAESLISQEIASQEDIVYKLTQAVLVQEMALKEL
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSKSDFLQTQVEHFRKESERGALSRMMGGANPAPVQPQPVRQPSAFGSFMQTAAGVAAGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VAGNLISNALFGDEAPATAEAAPEVAPEAAETEAPTETAAADTAVPEDAGSSFLDDNSGF
HHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
ASEYSSEDTFANTGFGGDESFGGFDDGGFGGDFGGDDEEF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA