| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963152
Identifier: 157963152
GI number: 157963152
Start: 4078765
End: 4079262
Strand: Direct
Name: 157963152
Synonym: Spea_3336
Alternate gene names: NA
Gene position: 4078765-4079262 (Clockwise)
Preceding gene: 157963151
Following gene: 157963154
Centisome position: 78.82
GC content: 46.39
Gene sequence:
>498_bases ATGAGTCGCGTTATTCTTGTATTAGGTTCGCCTAACGATAACCAAGGCCGTCTTTCTGATATTGCGATATCGCGCTGCCA AGCAGCGCTTTGGCAATATCAATTACGTCCAGACAGTAAAGTACTGCTCACTGGTGGCTTTGGTGAGCATTTTAACCAAA CTAACACCGCCCACGCTCTTTATTGTCAGGCTTACCTTATTGACCACGGCATGCCTAACAGCGCCTTTACCGATATTGCC CTTAGCCGCTTCACATTTGAAGATGCCATACTGTCGAAGCCTATCGTTGAGGAGCATGGCTTTAGAGAGCTTTGCCTTGT CACGTCAGAGTTTCATTTGCCTAGAGCAAGGCTTATTTTTAGCCAAATTTTTGCAGCGCAGATACTGACTTATGTGGCGG CAACAACGTCATGTTCAGCAGCCGAGCTTGAGCGACTCAAGCAACATGAGTTATCAGTGATGGATAGAGAAAAGGCCAAC CTTGCTGCGCTAAAATAA
Upstream 100 bases:
>100_bases CTGTTGCATGAGTCTTTTCCGTGAGACTGTTGCACTAGACTGGGCGATTCAACAGCTTGATGAAGCCGCTTAAATAACTT AACGAGGAAATACAGACGTA
Downstream 100 bases:
>100_bases AAAGAAATGAAGTGAACTGAGCCTTGTTACTTCAATGCCCTTTCAATGTACTTTATTCTCGCAGCTGCCAATCGGCACGG TTAAAGAAATACTCCTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSRVILVLGSPNDNQGRLSDIAISRCQAALWQYQLRPDSKVLLTGGFGEHFNQTNTAHALYCQAYLIDHGMPNSAFTDIA LSRFTFEDAILSKPIVEEHGFRELCLVTSEFHLPRARLIFSQIFAAQILTYVAATTSCSAAELERLKQHELSVMDREKAN LAALK
Sequences:
>Translated_165_residues MSRVILVLGSPNDNQGRLSDIAISRCQAALWQYQLRPDSKVLLTGGFGEHFNQTNTAHALYCQAYLIDHGMPNSAFTDIA LSRFTFEDAILSKPIVEEHGFRELCLVTSEFHLPRARLIFSQIFAAQILTYVAATTSCSAAELERLKQHELSVMDREKAN LAALK >Mature_164_residues SRVILVLGSPNDNQGRLSDIAISRCQAALWQYQLRPDSKVLLTGGFGEHFNQTNTAHALYCQAYLIDHGMPNSAFTDIAL SRFTFEDAILSKPIVEEHGFRELCLVTSEFHLPRARLIFSQIFAAQILTYVAATTSCSAAELERLKQHELSVMDREKANL AALK
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18427; Mature: 18296
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVILVLGSPNDNQGRLSDIAISRCQAALWQYQLRPDSKVLLTGGFGEHFNQTNTAHAL CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH YCQAYLIDHGMPNSAFTDIALSRFTFEDAILSKPIVEEHGFRELCLVTSEFHLPRARLIF HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHEEEECCCCCCCHHHHHH SQIFAAQILTYVAATTSCSAAELERLKQHELSVMDREKANLAALK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SRVILVLGSPNDNQGRLSDIAISRCQAALWQYQLRPDSKVLLTGGFGEHFNQTNTAHAL CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH YCQAYLIDHGMPNSAFTDIALSRFTFEDAILSKPIVEEHGFRELCLVTSEFHLPRARLIF HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHEEEECCCCCCCHHHHHH SQIFAAQILTYVAATTSCSAAELERLKQHELSVMDREKANLAALK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA