Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963154

Identifier: 157963154

GI number: 157963154

Start: 4080372

End: 4080797

Strand: Direct

Name: 157963154

Synonym: Spea_3338

Alternate gene names: NA

Gene position: 4080372-4080797 (Clockwise)

Preceding gene: 157963152

Following gene: 157963155

Centisome position: 78.85

GC content: 40.85

Gene sequence:

>426_bases
ATGAGTATTATAGAGCGAGTATTTCACTCTGTATTGTTTGAAGTACTAGCGGTGACATTTTCGATTATTGGATTATCGAT
TTTTACCGATTTCGATGTCAAATCACTATCTGGAATGATGATAGTTGTTGCGACCATAGCAATGATCTGGAACTTTATAT
TCAACTGGGGGTTTGATCGTGTTATCACTGGCGATAAAGAGAAGCGCCCGTTAAAAGTTCGAGTTGTACACGTCAGCTTA
TTTGAAGTGGGCTTACTATTTTTCACCGTGCCTGTGATGGCTTACATACTCAATATAGGCATAGTAGAAGCGCTAATTAT
GGATCTCGGCGTGACTGTGTTTATCACTATTTATGCCTTTACCTATAACTTTATCTACGATCACACCCGGGCTTTTATCA
TCCGCAGCCGCGCTGTCGCCTGTTGA

Upstream 100 bases:

>100_bases
GCTGTTAACTTTGCCTACTCTTTTTTCCTGTAATAATCAGCGCCCTTTTACAGCCTTTAGGGGCTGACATAAATACATGC
GACGTTTTTTGGAGTAAGTA

Downstream 100 bases:

>100_bases
TTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTAGTTACAGACTATTGATTGAGCTCACTTGAATTAATCATTGCTAACTCT
TGTTTATTGACGAAGCTCGC

Product: transmembrane pair domain-containing protein

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Pair Family Protein

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSIIERVFHSVLFEVLAVTFSIIGLSIFTDFDVKSLSGMMIVVATIAMIWNFIFNWGFDRVITGDKEKRPLKVRVVHVSL
FEVGLLFFTVPVMAYILNIGIVEALIMDLGVTVFITIYAFTYNFIYDHTRAFIIRSRAVAC

Sequences:

>Translated_141_residues
MSIIERVFHSVLFEVLAVTFSIIGLSIFTDFDVKSLSGMMIVVATIAMIWNFIFNWGFDRVITGDKEKRPLKVRVVHVSL
FEVGLLFFTVPVMAYILNIGIVEALIMDLGVTVFITIYAFTYNFIYDHTRAFIIRSRAVAC
>Mature_140_residues
SIIERVFHSVLFEVLAVTFSIIGLSIFTDFDVKSLSGMMIVVATIAMIWNFIFNWGFDRVITGDKEKRPLKVRVVHVSLF
EVGLLFFTVPVMAYILNIGIVEALIMDLGVTVFITIYAFTYNFIYDHTRAFIIRSRAVAC

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16069; Mature: 15938

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIERVFHSVLFEVLAVTFSIIGLSIFTDFDVKSLSGMMIVVATIAMIWNFIFNWGFDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VITGDKEKRPLKVRVVHVSLFEVGLLFFTVPVMAYILNIGIVEALIMDLGVTVFITIYAF
EECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYNFIYDHTRAFIIRSRAVAC
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIIERVFHSVLFEVLAVTFSIIGLSIFTDFDVKSLSGMMIVVATIAMIWNFIFNWGFDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VITGDKEKRPLKVRVVHVSLFEVGLLFFTVPVMAYILNIGIVEALIMDLGVTVFITIYAF
EECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYNFIYDHTRAFIIRSRAVAC
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA