| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963102
Identifier: 157963102
GI number: 157963102
Start: 4027769
End: 4028188
Strand: Direct
Name: 157963102
Synonym: Spea_3286
Alternate gene names: NA
Gene position: 4027769-4028188 (Clockwise)
Preceding gene: 157963101
Following gene: 157963103
Centisome position: 77.84
GC content: 43.1
Gene sequence:
>420_bases ATGGACAATAACAGTAACAAGCAATATCTGTTTGATAATCCTAAGAACATAAAACGTGTTCTGTATCTTTTATATGCCTG CTGCACCCTGCTCGTGGTGCTTGATTTTGTTATCAATCGCCATGTCTATCATAGCTGGGAGAACCTGCCCGCCTTCTACC CCATCTATGGTTTTGTTGGCTGTGTCGTCTTAGTGGTCATTGCCCGCTGGATGCGAACGTTTTTGATGCGCCCAGAAGAC TATTATGACAATTTTTACGATAACCATCCCGATGGCAACCGAAATAAAGTTCATGGCGGTATTCATAGCAACATTCATTA CCAAAACACTTCAGAAAATGCTGCAGATGAAAACACTCAAAAGGGTGTCCCCCTGCTAGCAAAAAACAACACTAGAGGTG GTCACCATGTGGATGCTTGA
Upstream 100 bases:
>100_bases GCGCTGTCCATCACCACCCTAGGTTGCTTGATTCTATTCATCTATCCGCAACCCCTCTATGAGTTGGCAAAAACCATCTT AACTGTACCGGGAGTCAGCC
Downstream 100 bases:
>100_bases GCTACCGCCCTTTACCCTATTCTTTATAGGTGGGCTTATTGCTGCAATGACCCGGGGCACACTGCGCGGCGCAATAATGG TTGCCATTCCTGTTATTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVGCVVLVVIARWMRTFLMRPED YYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQKGVPLLAKNNTRGGHHVDA
Sequences:
>Translated_139_residues MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVGCVVLVVIARWMRTFLMRPED YYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQKGVPLLAKNNTRGGHHVDA >Mature_139_residues MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVGCVVLVVIARWMRTFLMRPED YYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQKGVPLLAKNNTRGGHHVDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16160; Mature: 16160
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVG CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH CVVLVVIARWMRTFLMRPEDYYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQ HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC KGVPLLAKNNTRGGHHVDA CCCCEEECCCCCCCCCCCC >Mature Secondary Structure MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVG CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH CVVLVVIARWMRTFLMRPEDYYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQ HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC KGVPLLAKNNTRGGHHVDA CCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA