The gene/protein map for NC_009901 is currently unavailable.
Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963102

Identifier: 157963102

GI number: 157963102

Start: 4027769

End: 4028188

Strand: Direct

Name: 157963102

Synonym: Spea_3286

Alternate gene names: NA

Gene position: 4027769-4028188 (Clockwise)

Preceding gene: 157963101

Following gene: 157963103

Centisome position: 77.84

GC content: 43.1

Gene sequence:

>420_bases
ATGGACAATAACAGTAACAAGCAATATCTGTTTGATAATCCTAAGAACATAAAACGTGTTCTGTATCTTTTATATGCCTG
CTGCACCCTGCTCGTGGTGCTTGATTTTGTTATCAATCGCCATGTCTATCATAGCTGGGAGAACCTGCCCGCCTTCTACC
CCATCTATGGTTTTGTTGGCTGTGTCGTCTTAGTGGTCATTGCCCGCTGGATGCGAACGTTTTTGATGCGCCCAGAAGAC
TATTATGACAATTTTTACGATAACCATCCCGATGGCAACCGAAATAAAGTTCATGGCGGTATTCATAGCAACATTCATTA
CCAAAACACTTCAGAAAATGCTGCAGATGAAAACACTCAAAAGGGTGTCCCCCTGCTAGCAAAAAACAACACTAGAGGTG
GTCACCATGTGGATGCTTGA

Upstream 100 bases:

>100_bases
GCGCTGTCCATCACCACCCTAGGTTGCTTGATTCTATTCATCTATCCGCAACCCCTCTATGAGTTGGCAAAAACCATCTT
AACTGTACCGGGAGTCAGCC

Downstream 100 bases:

>100_bases
GCTACCGCCCTTTACCCTATTCTTTATAGGTGGGCTTATTGCTGCAATGACCCGGGGCACACTGCGCGGCGCAATAATGG
TTGCCATTCCTGTTATTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVGCVVLVVIARWMRTFLMRPED
YYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQKGVPLLAKNNTRGGHHVDA

Sequences:

>Translated_139_residues
MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVGCVVLVVIARWMRTFLMRPED
YYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQKGVPLLAKNNTRGGHHVDA
>Mature_139_residues
MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVGCVVLVVIARWMRTFLMRPED
YYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQKGVPLLAKNNTRGGHHVDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16160; Mature: 16160

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVG
CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
CVVLVVIARWMRTFLMRPEDYYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQ
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
KGVPLLAKNNTRGGHHVDA
CCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MDNNSNKQYLFDNPKNIKRVLYLLYACCTLLVVLDFVINRHVYHSWENLPAFYPIYGFVG
CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
CVVLVVIARWMRTFLMRPEDYYDNFYDNHPDGNRNKVHGGIHSNIHYQNTSENAADENTQ
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
KGVPLLAKNNTRGGHHVDA
CCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA