| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is nuoN [H]
Identifier: 157963101
GI number: 157963101
Start: 4026289
End: 4027779
Strand: Direct
Name: nuoN [H]
Synonym: Spea_3285
Alternate gene names: 157963101
Gene position: 4026289-4027779 (Clockwise)
Preceding gene: 157963100
Following gene: 157963102
Centisome position: 77.81
GC content: 50.7
Gene sequence:
>1491_bases ATGAATCACTCTTTGGATCTATTGCTACAGCTAACCATTATATTGCCGCTGCTTGCCACTTTGGCGATCTTGGCAACGGG AAAGCACCCCAACCTTCGTGAGGCTGTAACGATAAGCATCAGCCTTGCCGTTATGTACTGTGTGATAAACCTATATCAAG GGCTCAGTGCAGGCGCATCTATCGAGGTGTTTTGGTGGCAACTGCTACCGGGCTTGGAAGTGAGCTTTGTGGTTGAGCCT TTAGGTATGCTGTTTGCCCTCATTGCCAGCTTTCTGTGGCTCATTACCACCCTATACGCCATCGGCTATATGCGCGGCCA TGGGGAGGAGAATCAAACCCGCTTTTACCTCTGCTTTGCGTTGGCCATAAGCGCAGTGATGGGATTAGCATTTTCCGCCA ACCTGTTTACCCTGTTTATCTTCTACGAAGTCTTGACCCTGTCCACCTATCCTTTAGTGACCCACGCTGGCACAGAAAAA GCCAAGCAAGGGGGGCGCGTATACTTAGGGATCTTACTCGGGACCTCCATCGCCTTCTTCCTTTTAGCGATTATCTTGAC CTGGTTTGTGGCCGGCACCTTAGACTTCAAACCCGGCGGCGTGTTTCACACTGATGTTGATACCAGCTTACTGGGAGCCA TACTGGTACTGTTTGTGTTTGGTATTGGTAAGGCGGCCATCATGCCGTTCCATCGTTGGCTCCCCGCCGCTATGGTGGCG CCAACACCGGTGAGTGCCCTGCTGCATGCGGTAGCTGTGGTCAAGGCTGGGGTGTTCACCATCTTAAAGATCTGCGTGTT TATCTTTGGTATCGAGCTACTACCTACTCTGCCTACGACCGAATTCCTGCTCTATTTAGCTGGCGCATCGGTATTGCTCG CCTCCATAGTGGCAATGCGTCAGGATAACTTAAAAGCACGACTCGCCTACTCAACGGTGAGTCAACTGGGCTATATCACC ATAGGCGCACTGCTGGCCACCTCATCAGGGGTCATTGGTAGCTCGATGCATATTGCAACCCACGCTTTTGGCAAGATCAC CCTATTCTTCTGTGCAGGCGCGATTCTGGTTGCGACCCATAAATCAAAAGTAAGTGAAATGCGCGGCCTCGGCTTTACCA TGCCTGTCACCATGGCGGCTTTTTTTATCGCCAGTCTAAGTATTATTGGTGTTCCACCCGCAGGCGGTACGTGGAGTAAG TGGTTCCTGTTAATGGGCACAATGGAAACCGAACATTGGGTCATTATGATGGTGCTGATGGTGAGCTCTCTGCTCAATAT CGCCTATCTTCTACCTATTCCATACCATGCCTTTTTCCCAGGCAAGGGCCATGCCGCAACTAAGACTGGGATCAAGGAAG CCCCTCTCATGTCATTAATCGCGCTGTCCATCACCACCCTAGGTTGCTTGATTCTATTCATCTATCCGCAACCCCTCTAT GAGTTGGCAAAAACCATCTTAACTGTACCGGGAGTCAGCCATGGACAATAA
Upstream 100 bases:
>100_bases TTTGGGTGCTGGTACTGGCCAATATCTATTTTGGCATCGATACCCGCCTTAGTGTGCAGGTGGCACAGGCGGCCTCTCAA AGCTTGTTTGGAATTAACCC
Downstream 100 bases:
>100_bases CAGTAACAAGCAATATCTGTTTGATAATCCTAAGAACATAAAACGTGTTCTGTATCTTTTATATGCCTGCTGCACCCTGC TCGTGGTGCTTGATTTTGTT
Product: NADH dehydrogenase (quinone)
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N [H]
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MNHSLDLLLQLTIILPLLATLAILATGKHPNLREAVTISISLAVMYCVINLYQGLSAGASIEVFWWQLLPGLEVSFVVEP LGMLFALIASFLWLITTLYAIGYMRGHGEENQTRFYLCFALAISAVMGLAFSANLFTLFIFYEVLTLSTYPLVTHAGTEK AKQGGRVYLGILLGTSIAFFLLAIILTWFVAGTLDFKPGGVFHTDVDTSLLGAILVLFVFGIGKAAIMPFHRWLPAAMVA PTPVSALLHAVAVVKAGVFTILKICVFIFGIELLPTLPTTEFLLYLAGASVLLASIVAMRQDNLKARLAYSTVSQLGYIT IGALLATSSGVIGSSMHIATHAFGKITLFFCAGAILVATHKSKVSEMRGLGFTMPVTMAAFFIASLSIIGVPPAGGTWSK WFLLMGTMETEHWVIMMVLMVSSLLNIAYLLPIPYHAFFPGKGHAATKTGIKEAPLMSLIALSITTLGCLILFIYPQPLY ELAKTILTVPGVSHGQ
Sequences:
>Translated_496_residues MNHSLDLLLQLTIILPLLATLAILATGKHPNLREAVTISISLAVMYCVINLYQGLSAGASIEVFWWQLLPGLEVSFVVEP LGMLFALIASFLWLITTLYAIGYMRGHGEENQTRFYLCFALAISAVMGLAFSANLFTLFIFYEVLTLSTYPLVTHAGTEK AKQGGRVYLGILLGTSIAFFLLAIILTWFVAGTLDFKPGGVFHTDVDTSLLGAILVLFVFGIGKAAIMPFHRWLPAAMVA PTPVSALLHAVAVVKAGVFTILKICVFIFGIELLPTLPTTEFLLYLAGASVLLASIVAMRQDNLKARLAYSTVSQLGYIT IGALLATSSGVIGSSMHIATHAFGKITLFFCAGAILVATHKSKVSEMRGLGFTMPVTMAAFFIASLSIIGVPPAGGTWSK WFLLMGTMETEHWVIMMVLMVSSLLNIAYLLPIPYHAFFPGKGHAATKTGIKEAPLMSLIALSITTLGCLILFIYPQPLY ELAKTILTVPGVSHGQ >Mature_496_residues MNHSLDLLLQLTIILPLLATLAILATGKHPNLREAVTISISLAVMYCVINLYQGLSAGASIEVFWWQLLPGLEVSFVVEP LGMLFALIASFLWLITTLYAIGYMRGHGEENQTRFYLCFALAISAVMGLAFSANLFTLFIFYEVLTLSTYPLVTHAGTEK AKQGGRVYLGILLGTSIAFFLLAIILTWFVAGTLDFKPGGVFHTDVDTSLLGAILVLFVFGIGKAAIMPFHRWLPAAMVA PTPVSALLHAVAVVKAGVFTILKICVFIFGIELLPTLPTTEFLLYLAGASVLLASIVAMRQDNLKARLAYSTVSQLGYIT IGALLATSSGVIGSSMHIATHAFGKITLFFCAGAILVATHKSKVSEMRGLGFTMPVTMAAFFIASLSIIGVPPAGGTWSK WFLLMGTMETEHWVIMMVLMVSSLLNIAYLLPIPYHAFFPGKGHAATKTGIKEAPLMSLIALSITTLGCLILFIYPQPLY ELAKTILTVPGVSHGQ
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo
COG id: COG0651
COG function: function code CP; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=360, Percent_Identity=31.1111111111111, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1788829, Length=401, Percent_Identity=29.426433915212, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1788614, Length=483, Percent_Identity=28.3643892339545, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1788827, Length=320, Percent_Identity=30.9375, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI145693160, Length=429, Percent_Identity=25.6410256410256, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788831, Length=332, Percent_Identity=28.3132530120482, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788613, Length=393, Percent_Identity=22.9007633587786, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI2367154, Length=346, Percent_Identity=26.5895953757225, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010096 - InterPro: IPR001750 - InterPro: IPR003918 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 53445; Mature: 53445
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHSLDLLLQLTIILPLLATLAILATGKHPNLREAVTISISLAVMYCVINLYQGLSAGAS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCE IEVFWWQLLPGLEVSFVVEPLGMLFALIASFLWLITTLYAIGYMRGHGEENQTRFYLCFA EEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LAISAVMGLAFSANLFTLFIFYEVLTLSTYPLVTHAGTEKAKQGGRVYLGILLGTSIAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCEEEHHHHHHHHHHH LLAIILTWFVAGTLDFKPGGVFHTDVDTSLLGAILVLFVFGIGKAAIMPFHRWLPAAMVA HHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCC PTPVSALLHAVAVVKAGVFTILKICVFIFGIELLPTLPTTEFLLYLAGASVLLASIVAMR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QDNLKARLAYSTVSQLGYITIGALLATSSGVIGSSMHIATHAFGKITLFFCAGAILVATH HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEC KSKVSEMRGLGFTMPVTMAAFFIASLSIIGVPPAGGTWSKWFLLMGTMETEHWVIMMVLM HHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHEEECCCCCHHHHHHHHH VSSLLNIAYLLPIPYHAFFPGKGHAATKTGIKEAPLMSLIALSITTLGCLILFIYPQPLY HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH ELAKTILTVPGVSHGQ HHHHHHHCCCCCCCCC >Mature Secondary Structure MNHSLDLLLQLTIILPLLATLAILATGKHPNLREAVTISISLAVMYCVINLYQGLSAGAS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCE IEVFWWQLLPGLEVSFVVEPLGMLFALIASFLWLITTLYAIGYMRGHGEENQTRFYLCFA EEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LAISAVMGLAFSANLFTLFIFYEVLTLSTYPLVTHAGTEKAKQGGRVYLGILLGTSIAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCEEEHHHHHHHHHHH LLAIILTWFVAGTLDFKPGGVFHTDVDTSLLGAILVLFVFGIGKAAIMPFHRWLPAAMVA HHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCC PTPVSALLHAVAVVKAGVFTILKICVFIFGIELLPTLPTTEFLLYLAGASVLLASIVAMR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QDNLKARLAYSTVSQLGYITIGALLATSSGVIGSSMHIATHAFGKITLFFCAGAILVATH HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEC KSKVSEMRGLGFTMPVTMAAFFIASLSIIGVPPAGGTWSKWFLLMGTMETEHWVIMMVLM HHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHEEECCCCCHHHHHHHHH VSSLLNIAYLLPIPYHAFFPGKGHAATKTGIKEAPLMSLIALSITTLGCLILFIYPQPLY HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH ELAKTILTVPGVSHGQ HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA