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The map label for this gene is yghB [H]

Identifier: 157962853

GI number: 157962853

Start: 3721676

End: 3722407

Strand: Direct

Name: yghB [H]

Synonym: Spea_3035

Alternate gene names: 157962853

Gene position: 3721676-3722407 (Clockwise)

Preceding gene: 157962851

Following gene: 157962859

Centisome position: 71.92

GC content: 46.58

Gene sequence:

>732_bases
ATGCTAGATTCATTTGTCTCCGTCATTACAGCCCTATGGCAACAAGACTTCGCTTCACTGCAAAGCCCTGGCAGCGCAAC
CATGATATACGTTTGCGTTTTCACCTTAATCTGGTTAGAGAGTGCATTTCTTCCCGCAGCCCCCATGCCCTGTGATAGTG
TTGTGATACTCTCCGGCAGCCTAGCCGCTGCTGGAATCATCAGTTTCCCTACGGTATTTGCCGCTTTAGTCATTGCTGGC
GCAACAGGGAGCTGGCTAGCTTTCATTCAAGGTCGATGGTTACACAGACTACCTAAAATACAGCGTTGGATCGATGCCGT
ACCAGAAAATCGTATGAAAACGGTTGATACTTTACTTAACAAACACGGATTATTAGCCCTGTTTACCGCGCGCTTTATTC
CTGTTGTGCGCCCATTATTACCATTAATGATGGGGCTTCATATTAAGAAAGTAACTAGTTTTCACTACTTTGCCTGGTTG
AGCGCCGCTATTTGGGTTACGTTACTGCTCGGTTTTGGCTACGCACTATCCTTCCTGCCTGAAAACATCGCGCGGGTCGT
CACTATGGCGCTAATCATAGCCCCATTCGTGACGCTAGCTATCGCTATAGTAAGCCTATTGAGCCGCTTTATTATTAAGA
AAAGACGGATGAAGAAATTACCGGTCGCAGAGCTCATACAAGAAACGGTGCTTGCAAAGCCAGTCACACCACTAAAGAAA
ACCGCTAAGTAA

Upstream 100 bases:

>100_bases
GACGCTTTTGTCACTTATAACACCACGAGTAGCAACTCTCTCAAGCCTCTGCCACATAAGCATTTGCCTTGAGTACTATG
CCCCTTTAGGAACACCAACA

Downstream 100 bases:

>100_bases
CTCTTGGCTTCTGGCCCTGTATCTAACAGGGCCAGTTTGAATTCAGCCTGTTATGGCATGCTTTATCTCCAACTATTTAT
TACCTAATTCCCCTGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLDSFVSVITALWQQDFASLQSPGSATMIYVCVFTLIWLESAFLPAAPMPCDSVVILSGSLAAAGIISFPTVFAALVIAG
ATGSWLAFIQGRWLHRLPKIQRWIDAVPENRMKTVDTLLNKHGLLALFTARFIPVVRPLLPLMMGLHIKKVTSFHYFAWL
SAAIWVTLLLGFGYALSFLPENIARVVTMALIIAPFVTLAIAIVSLLSRFIIKKRRMKKLPVAELIQETVLAKPVTPLKK
TAK

Sequences:

>Translated_243_residues
MLDSFVSVITALWQQDFASLQSPGSATMIYVCVFTLIWLESAFLPAAPMPCDSVVILSGSLAAAGIISFPTVFAALVIAG
ATGSWLAFIQGRWLHRLPKIQRWIDAVPENRMKTVDTLLNKHGLLALFTARFIPVVRPLLPLMMGLHIKKVTSFHYFAWL
SAAIWVTLLLGFGYALSFLPENIARVVTMALIIAPFVTLAIAIVSLLSRFIIKKRRMKKLPVAELIQETVLAKPVTPLKK
TAK
>Mature_243_residues
MLDSFVSVITALWQQDFASLQSPGSATMIYVCVFTLIWLESAFLPAAPMPCDSVVILSGSLAAAGIISFPTVFAALVIAG
ATGSWLAFIQGRWLHRLPKIQRWIDAVPENRMKTVDTLLNKHGLLALFTARFIPVVRPLLPLMMGLHIKKVTSFHYFAWL
SAAIWVTLLLGFGYALSFLPENIARVVTMALIIAPFVTLAIAIVSLLSRFIIKKRRMKKLPVAELIQETVLAKPVTPLKK
TAK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789384, Length=174, Percent_Identity=40.2298850574713, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1789481, Length=179, Percent_Identity=37.4301675977654, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26801; Mature: 26801

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]