| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962851
Identifier: 157962851
GI number: 157962851
Start: 3718285
End: 3720702
Strand: Direct
Name: 157962851
Synonym: Spea_3033
Alternate gene names: NA
Gene position: 3718285-3720702 (Clockwise)
Preceding gene: 157962849
Following gene: 157962853
Centisome position: 71.86
GC content: 45.29
Gene sequence:
>2418_bases ATGACGTTACAATTGCATAAAGCCCTCGTTGAACAGTTAAAACCCCTGTTAATGGAACCTGAATTTCCGGAGCTGTTCGA TCAGCTTACCGCCGATGAAACCAATTCAACGCGCTTTTTGCTCAAGATGGAACTCAATAGACTGGCCTCTGCCTGCACTC GGCTCATCGATCTCCGTAATAAAACCGAACTCGAGTGTGAGGTGTTTATTTTTGAAGGCCAACAACATTATCTGGACGCC CCCGCCAAAGAAAGATTTTTAGAGGCACTCGCACTTTATCGCGACGAGTATACCTTAGGGGTTTATGAGCAGGTAATAGA AGCGCACAAGCAGCGTATATCGAAGCTACGCCAGTCTAACCAGAATGAAGTCGTTAGCGACGTCTCACCGTTTGTTGCCA AGGCTGTGGTTTTAGGAAGCTACTTCGCCCGTAGCGAAGAGCGGATGAACTACAGCATGCGCATCAATGTCACTCAAGGT CACCATAATTTTAACGGGATCACCGTCGATCTATCTGTGGGCGGCGCGAGGATCCGTATTCCGGCAAAACATGGCCTGCA ACCTAAGGTGCCTATTTGCATCAAGCTATTGGAGCTTGGTGAAGAGTACTATCATCAAGATCTACAGCAAGGCGTCGACT ATCAAATTGTCGACTCCGAACAGAACCATGAATATTGCTGGCTCAGATTAAAGCGGGTTTCTGGCAGTGAAGCACTGTCA CTGATGCTAGAAAAATTGATCCGAGGTTATAAGTTCCGCTACAAGGTCGATGTAAATGATGTACTAGTTACGACAAAAGG GCTGGGGTTTGAACGCCATTACCTGCCTCATCTGCCTCATTTACCGCTATTTATTGAGACGAGAATGAATTCGGACTCGA ATGCTCCGCAGCAACTCATCATCAGTCATAAATTACTCAGTCGTGATAACCAAGCTATTAGTGAATATTTCAAAGATGAA GACAATATTTGTCAGCTAAGCAGCTTTCTCACCCCCGCTAGACTGAAGCGCATTATAGACTCTGTTGATGATAGCCAGCA CTGTCTGTTCTTCTGCTTCACCTTCACAGCCCAAGGGGCGAAATTCTTTTACTCTGCAAGCTTAGCAGAGTTAAATTCTC GAGATTTGTTAGCACTGTTTTTAAGTTTTGGCGCCGCTAAGCCTAGTTTTAGGGTATTTAAGATTGCAAAACAAGCTGTC GACCATCAACAATCCTATAAAGCCAGTATTTTACCTGGTGATGAAGGCCGCTATTCCGCGCTCACAGAAACCCAGCTAAG TGCTTTTAGCCATGCACTACAAGTCATAGATATGACTCCACTAAAGGCTGATGAGCAGTACCAATGCTGGGCCCAAATAA ACCGAGATGCAAAAAATCAAGCCAGTGTTAATGAGTTAAAAATCTTTGGCCAAAAAAAGGTCTCTCAACACAGTATAAAG CTGATCTCGCTGCAGTTTAGTGAGCGACGCAATGAATCCCGCTTTGCCTTTAAAACCGCAGTAATGCTTAGCCAAGGTAA GCAGAGCATGGCCGCAAGCACAGATGATATTTCAAGCCGAGGCTTGAAGCTTAGCGTCACAACACCGGTGAATTTTGATG AAGCTGAACCCATTTTAATCAGCTTCCCTAAATTACAGCCCCTTGCAGGTAAAACCTCATTAGCTTCACTGCCTTACCGA TTGATCCGTACCCGTAAAAACGGCATCACCTTACACCTCGCGGCGCAAGTCGGTCACACGCCTCATGTCGGCGTCGAGTT TTTAAATCGATTGATAGAGCATAACCGTGAGAAACTTGAGAAACTCACCGAAAATAACCATAACGTCAAAGAGCTCGCCG ATGGCATGAAAAATATCGCCATGCGAAAACTGGCTTCCGTCCCCTACTATCTTGAGCGCACGGTAAAATCGGCTTATATA TCGACCCTAGGCATTGGCACCGAACAAAATCATATTGCCAACATCTTTGCCTCTCAAAGCGATAATACATTAGCTTACAA TCTGGCTCCTTTGCTTAATGACGGTAAGTTGAAGCGAGACTTCATCACACCCATGCGCTCCATGAAGCCACAAAATGGCT TATCCTATTTTGAAATATTCGTGCAGATCTCCCGTATGTCACAAGGGCAGATAAAAGTGCGCTGCATCAGTGATTGTGAT CTGAGAGAACGTTCACAGCAACTTAGCTTTATTCAACGCAGTCAAGAGCTTGGTGAGTTTATGGCGTTAAGGGTGTATCG CGGCGCCACAGGTAAACCTGACTTAAATTACATTCGCCGGGAACGGGAGTACATCAATATTCACTCTCCCCATAAAGGGA AGAAATTAGAAGGGCAGCTTTGGAATATCATTGGAGTGGGCGAATTTTTGAATGTCACCCAAGAGGTCACACTGCGATTT CCTGAGTTACTTTCCTGA
Upstream 100 bases:
>100_bases ATACTAATTAAAGATAAGCAGAGTAGTCGACTACTCCCTTGAAAAATGCCTATGAGCCTATCAGCCATTGGCCTTTTTAG CATCCCAAAAGAAGTGATTA
Downstream 100 bases:
>100_bases GTTACTTTCCTGAGTTACTTTCTAAGTTATTAGAGTTGAGCCGCCGCTAACCAAGTCACGTGTACAGGCAACTTGGCATT ATGCAATAACCCTAAGACTT
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly TapZ; Glycosyltransferase
Number of amino acids: Translated: 805; Mature: 804
Protein sequence:
>805_residues MTLQLHKALVEQLKPLLMEPEFPELFDQLTADETNSTRFLLKMELNRLASACTRLIDLRNKTELECEVFIFEGQQHYLDA PAKERFLEALALYRDEYTLGVYEQVIEAHKQRISKLRQSNQNEVVSDVSPFVAKAVVLGSYFARSEERMNYSMRINVTQG HHNFNGITVDLSVGGARIRIPAKHGLQPKVPICIKLLELGEEYYHQDLQQGVDYQIVDSEQNHEYCWLRLKRVSGSEALS LMLEKLIRGYKFRYKVDVNDVLVTTKGLGFERHYLPHLPHLPLFIETRMNSDSNAPQQLIISHKLLSRDNQAISEYFKDE DNICQLSSFLTPARLKRIIDSVDDSQHCLFFCFTFTAQGAKFFYSASLAELNSRDLLALFLSFGAAKPSFRVFKIAKQAV DHQQSYKASILPGDEGRYSALTETQLSAFSHALQVIDMTPLKADEQYQCWAQINRDAKNQASVNELKIFGQKKVSQHSIK LISLQFSERRNESRFAFKTAVMLSQGKQSMAASTDDISSRGLKLSVTTPVNFDEAEPILISFPKLQPLAGKTSLASLPYR LIRTRKNGITLHLAAQVGHTPHVGVEFLNRLIEHNREKLEKLTENNHNVKELADGMKNIAMRKLASVPYYLERTVKSAYI STLGIGTEQNHIANIFASQSDNTLAYNLAPLLNDGKLKRDFITPMRSMKPQNGLSYFEIFVQISRMSQGQIKVRCISDCD LRERSQQLSFIQRSQELGEFMALRVYRGATGKPDLNYIRREREYINIHSPHKGKKLEGQLWNIIGVGEFLNVTQEVTLRF PELLS
Sequences:
>Translated_805_residues MTLQLHKALVEQLKPLLMEPEFPELFDQLTADETNSTRFLLKMELNRLASACTRLIDLRNKTELECEVFIFEGQQHYLDA PAKERFLEALALYRDEYTLGVYEQVIEAHKQRISKLRQSNQNEVVSDVSPFVAKAVVLGSYFARSEERMNYSMRINVTQG HHNFNGITVDLSVGGARIRIPAKHGLQPKVPICIKLLELGEEYYHQDLQQGVDYQIVDSEQNHEYCWLRLKRVSGSEALS LMLEKLIRGYKFRYKVDVNDVLVTTKGLGFERHYLPHLPHLPLFIETRMNSDSNAPQQLIISHKLLSRDNQAISEYFKDE DNICQLSSFLTPARLKRIIDSVDDSQHCLFFCFTFTAQGAKFFYSASLAELNSRDLLALFLSFGAAKPSFRVFKIAKQAV DHQQSYKASILPGDEGRYSALTETQLSAFSHALQVIDMTPLKADEQYQCWAQINRDAKNQASVNELKIFGQKKVSQHSIK LISLQFSERRNESRFAFKTAVMLSQGKQSMAASTDDISSRGLKLSVTTPVNFDEAEPILISFPKLQPLAGKTSLASLPYR LIRTRKNGITLHLAAQVGHTPHVGVEFLNRLIEHNREKLEKLTENNHNVKELADGMKNIAMRKLASVPYYLERTVKSAYI STLGIGTEQNHIANIFASQSDNTLAYNLAPLLNDGKLKRDFITPMRSMKPQNGLSYFEIFVQISRMSQGQIKVRCISDCD LRERSQQLSFIQRSQELGEFMALRVYRGATGKPDLNYIRREREYINIHSPHKGKKLEGQLWNIIGVGEFLNVTQEVTLRF PELLS >Mature_804_residues TLQLHKALVEQLKPLLMEPEFPELFDQLTADETNSTRFLLKMELNRLASACTRLIDLRNKTELECEVFIFEGQQHYLDAP AKERFLEALALYRDEYTLGVYEQVIEAHKQRISKLRQSNQNEVVSDVSPFVAKAVVLGSYFARSEERMNYSMRINVTQGH HNFNGITVDLSVGGARIRIPAKHGLQPKVPICIKLLELGEEYYHQDLQQGVDYQIVDSEQNHEYCWLRLKRVSGSEALSL MLEKLIRGYKFRYKVDVNDVLVTTKGLGFERHYLPHLPHLPLFIETRMNSDSNAPQQLIISHKLLSRDNQAISEYFKDED NICQLSSFLTPARLKRIIDSVDDSQHCLFFCFTFTAQGAKFFYSASLAELNSRDLLALFLSFGAAKPSFRVFKIAKQAVD HQQSYKASILPGDEGRYSALTETQLSAFSHALQVIDMTPLKADEQYQCWAQINRDAKNQASVNELKIFGQKKVSQHSIKL ISLQFSERRNESRFAFKTAVMLSQGKQSMAASTDDISSRGLKLSVTTPVNFDEAEPILISFPKLQPLAGKTSLASLPYRL IRTRKNGITLHLAAQVGHTPHVGVEFLNRLIEHNREKLEKLTENNHNVKELADGMKNIAMRKLASVPYYLERTVKSAYIS TLGIGTEQNHIANIFASQSDNTLAYNLAPLLNDGKLKRDFITPMRSMKPQNGLSYFEIFVQISRMSQGQIKVRCISDCDL RERSQQLSFIQRSQELGEFMALRVYRGATGKPDLNYIRREREYINIHSPHKGKKLEGQLWNIIGVGEFLNVTQEVTLRFP ELLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91931; Mature: 91799
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQLHKALVEQLKPLLMEPEFPELFDQLTADETNSTRFLLKMELNRLASACTRLIDLRN CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCC KTELECEVFIFEGQQHYLDAPAKERFLEALALYRDEYTLGVYEQVIEAHKQRISKLRQSN CCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC QNEVVSDVSPFVAKAVVLGSYFARSEERMNYSMRINVTQGHHNFNGITVDLSVGGARIRI CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEEEECCCCCCCEEEEEEECCEEEEE PAKHGLQPKVPICIKLLELGEEYYHQDLQQGVDYQIVDSEQNHEYCWLRLKRVSGSEALS CHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCHHHHH LMLEKLIRGYKFRYKVDVNDVLVTTKGLGFERHYLPHLPHLPLFIETRMNSDSNAPQQLI HHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHH ISHKLLSRDNQAISEYFKDEDNICQLSSFLTPARLKRIIDSVDDSQHCLFFCFTFTAQGA HHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEHHCCCC KFFYSASLAELNSRDLLALFLSFGAAKPSFRVFKIAKQAVDHQQSYKASILPGDEGRYSA HHEEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCHH LTETQLSAFSHALQVIDMTPLKADEQYQCWAQINRDAKNQASVNELKIFGQKKVSQHSIK HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEE LISLQFSERRNESRFAFKTAVMLSQGKQSMAASTDDISSRGLKLSVTTPVNFDEAEPILI EEEEEEHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHCCEEEEEECCCCCCCCCCEEE SFPKLQPLAGKTSLASLPYRLIRTRKNGITLHLAAQVGHTPHVGVEFLNRLIEHNREKLE ECCCCCCCCCCCHHHHCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH KLTENNHNVKELADGMKNIAMRKLASVPYYLERTVKSAYISTLGIGTEQNHIANIFASQS HHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCC DNTLAYNLAPLLNDGKLKRDFITPMRSMKPQNGLSYFEIFVQISRMSQGQIKVRCISDCD CCEEEEEECHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC LRERSQQLSFIQRSQELGEFMALRVYRGATGKPDLNYIRREREYINIHSPHKGKKLEGQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCC WNIIGVGEFLNVTQEVTLRFPELLS EEEEECHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure TLQLHKALVEQLKPLLMEPEFPELFDQLTADETNSTRFLLKMELNRLASACTRLIDLRN CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCC KTELECEVFIFEGQQHYLDAPAKERFLEALALYRDEYTLGVYEQVIEAHKQRISKLRQSN CCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC QNEVVSDVSPFVAKAVVLGSYFARSEERMNYSMRINVTQGHHNFNGITVDLSVGGARIRI CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEEEECCCCCCCEEEEEEECCEEEEE PAKHGLQPKVPICIKLLELGEEYYHQDLQQGVDYQIVDSEQNHEYCWLRLKRVSGSEALS CHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCCHHHHH LMLEKLIRGYKFRYKVDVNDVLVTTKGLGFERHYLPHLPHLPLFIETRMNSDSNAPQQLI HHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHH ISHKLLSRDNQAISEYFKDEDNICQLSSFLTPARLKRIIDSVDDSQHCLFFCFTFTAQGA HHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEHHCCCC KFFYSASLAELNSRDLLALFLSFGAAKPSFRVFKIAKQAVDHQQSYKASILPGDEGRYSA HHEEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCHH LTETQLSAFSHALQVIDMTPLKADEQYQCWAQINRDAKNQASVNELKIFGQKKVSQHSIK HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEE LISLQFSERRNESRFAFKTAVMLSQGKQSMAASTDDISSRGLKLSVTTPVNFDEAEPILI EEEEEEHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHCCEEEEEECCCCCCCCCCEEE SFPKLQPLAGKTSLASLPYRLIRTRKNGITLHLAAQVGHTPHVGVEFLNRLIEHNREKLE ECCCCCCCCCCCHHHHCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH KLTENNHNVKELADGMKNIAMRKLASVPYYLERTVKSAYISTLGIGTEQNHIANIFASQS HHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCC DNTLAYNLAPLLNDGKLKRDFITPMRSMKPQNGLSYFEIFVQISRMSQGQIKVRCISDCD CCEEEEEECHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC LRERSQQLSFIQRSQELGEFMALRVYRGATGKPDLNYIRREREYINIHSPHKGKKLEGQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCC WNIIGVGEFLNVTQEVTLRFPELLS EEEEECHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA