| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962849
Identifier: 157962849
GI number: 157962849
Start: 3716239
End: 3716646
Strand: Direct
Name: 157962849
Synonym: Spea_3031
Alternate gene names: NA
Gene position: 3716239-3716646 (Clockwise)
Preceding gene: 157962848
Following gene: 157962851
Centisome position: 71.82
GC content: 43.14
Gene sequence:
>408_bases ATGGATAAAGTGGATGAAAGAAGGTTATTTTCGCGGTTAATCTTTGCAACTGATGCCAAGCTAATCAACCATGATAGCCA ATTTGATTATCAACATCAGAATCACTGGGCAACTAAGCTACTGGATATCAGCCTTAACGGCGCCTTGGTTGAATTACCCC AAGACTTTGACTTTAACGGCACAGAGCTAACGCTGGAGTTTAGCCTGCAAGAGCCTGAAATTAGAGTCGTGATGCTAACC AAGCTCGTTCACAGAGAAAATCAACAGCTTGGCTTAGCGTCTCAATACATTGATGTTGAGAGCATTAGCCACCTGCGCAG GCTTCTAGAACTAAACTTAGGTGATGCCAGTTTACTCGACAGAGAGTTAGAGCGGTTATTCGAGCAAAAGAGTCCCAATA TTGAATAG
Upstream 100 bases:
>100_bases CGCTTAGCGAGTGGTATTAATGATTAGTATTAGCTAGGATTACGCTAAGATTATGATACGAGCGTAGCAACCTACACTCA GTAGGAATACAAGGAATGGT
Downstream 100 bases:
>100_bases GAGCCCAAGCCCACTGGCTGCGACACTCCCAAGCCTTAAGTAAAAACGCCGCAGTATTGCGGCGTTTTTACAATCAAAGT TTTAGGCGGCCTTCACGCTT
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Carbamoylphosphate Synthase Large Subunit; Signaling Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDKVDERRLFSRLIFATDAKLINHDSQFDYQHQNHWATKLLDISLNGALVELPQDFDFNGTELTLEFSLQEPEIRVVMLT KLVHRENQQLGLASQYIDVESISHLRRLLELNLGDASLLDRELERLFEQKSPNIE
Sequences:
>Translated_135_residues MDKVDERRLFSRLIFATDAKLINHDSQFDYQHQNHWATKLLDISLNGALVELPQDFDFNGTELTLEFSLQEPEIRVVMLT KLVHRENQQLGLASQYIDVESISHLRRLLELNLGDASLLDRELERLFEQKSPNIE >Mature_135_residues MDKVDERRLFSRLIFATDAKLINHDSQFDYQHQNHWATKLLDISLNGALVELPQDFDFNGTELTLEFSLQEPEIRVVMLT KLVHRENQQLGLASQYIDVESISHLRRLLELNLGDASLLDRELERLFEQKSPNIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15790; Mature: 15790
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVDERRLFSRLIFATDAKLINHDSQFDYQHQNHWATKLLDISLNGALVELPQDFDFNG CCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHEEEEEECCCEEEECCCCCCCCC TELTLEFSLQEPEIRVVMLTKLVHRENQQLGLASQYIDVESISHLRRLLELNLGDASLLD CEEEEEEECCCCCEEHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHH RELERLFEQKSPNIE HHHHHHHHHCCCCCC >Mature Secondary Structure MDKVDERRLFSRLIFATDAKLINHDSQFDYQHQNHWATKLLDISLNGALVELPQDFDFNG CCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHEEEEEECCCEEEECCCCCCCCC TELTLEFSLQEPEIRVVMLTKLVHRENQQLGLASQYIDVESISHLRRLLELNLGDASLLD CEEEEEEECCCCCEEHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHH RELERLFEQKSPNIE HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA