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The map label for this gene is 157962784

Identifier: 157962784

GI number: 157962784

Start: 3632720

End: 3633634

Strand: Direct

Name: 157962784

Synonym: Spea_2966

Alternate gene names: NA

Gene position: 3632720-3633634 (Clockwise)

Preceding gene: 157962782

Following gene: 157962789

Centisome position: 70.2

GC content: 46.34

Gene sequence:

>915_bases
ATGCAAAACTATAAATCAGAGAAAGCCTCAATGAAAAATAAACATATCTTACCTACATTAGCCGCTCTATCACTGCTCCC
TGCAAGCTCCTATGCGGCAGAGGTGGCGAGCCTAGAAAGCGTTTTAAGCCAGAATCATGCCTGTAGCGACACAATTGTCA
TTCGCTCACAAGCCTTAACAGAAAAGCAGCTCAGCTCCGCTTGTCAGTTGTTAATCAAACAAGAAGCGAGTTTCCATAAG
CTATTTGGCACCCTCAATAAGCCGGTAGCCGATGACAATAATCACAAGATGCGCGCCAATGTTTATCACTCAAGACAAGA
CTATGTCGATCATGTCACCAACCATTTCGACGTGCCAAGCGACAACGGCGGCATGTATCTAGAGGGGTTACCCTGGGAAA
GTGATAACCAAGCCGAGTTTGTGGCCTATGAGAAAAAGGGCCAAGTTTGGAACTTAGCGCACGAGTACGTACATTACCTC
GATGGTCGCTTTAACCTCTACGGCGACTTCTGCCTCTCACTCCATGACTCCCACAGTGGCCCTGAATACTGCCCTAAGCC
TGCACCACTTTATCCTCATACCGTGTGGTGGAGTGAAGGTGTCGCTGAATATATCTCCCTCGGTGATAACAACCCGAAGG
CTATAGCCTTAATTGGCGGCGAGCCAAGCTATAAGCTTAGCGAAATCTTTAATACCAGCTATGAAAAAAATGGCGGCACA
GACAGAGTTTATCGCTGGGGTTACCTTGCGGTGCGCTTTATGATTGAAAACCATAAAGATAAAGTTGATACCATGCTTGG
CTTTACTCGAAAAGGTGACTATCCACGATATCAAGCATTGCTAGCCGGCTGGGGAACATCTATGGATGCTGAGTTTGATA
CTTGGCTTGAACAGCTAAAATCAGCGAAAAAGTAG

Upstream 100 bases:

>100_bases
TTAAGTAACTGGTTAATTGATTACATTTTAACGCTATTTTATGTGATGAAAAGCCTAGTTTGACTTCAATAGAGCTAAAT
GAAACACTTGAGGATATTGT

Downstream 100 bases:

>100_bases
CTTTCACTAGAAATAACCCATTAAAAAGGCCTCAATTGAGGCCTTTTTTGCTTTTCATTCATCTATTAAGATGAATAGCG
ACCATCATTAAAGACGGATC

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MQNYKSEKASMKNKHILPTLAALSLLPASSYAAEVASLESVLSQNHACSDTIVIRSQALTEKQLSSACQLLIKQEASFHK
LFGTLNKPVADDNNHKMRANVYHSRQDYVDHVTNHFDVPSDNGGMYLEGLPWESDNQAEFVAYEKKGQVWNLAHEYVHYL
DGRFNLYGDFCLSLHDSHSGPEYCPKPAPLYPHTVWWSEGVAEYISLGDNNPKAIALIGGEPSYKLSEIFNTSYEKNGGT
DRVYRWGYLAVRFMIENHKDKVDTMLGFTRKGDYPRYQALLAGWGTSMDAEFDTWLEQLKSAKK

Sequences:

>Translated_304_residues
MQNYKSEKASMKNKHILPTLAALSLLPASSYAAEVASLESVLSQNHACSDTIVIRSQALTEKQLSSACQLLIKQEASFHK
LFGTLNKPVADDNNHKMRANVYHSRQDYVDHVTNHFDVPSDNGGMYLEGLPWESDNQAEFVAYEKKGQVWNLAHEYVHYL
DGRFNLYGDFCLSLHDSHSGPEYCPKPAPLYPHTVWWSEGVAEYISLGDNNPKAIALIGGEPSYKLSEIFNTSYEKNGGT
DRVYRWGYLAVRFMIENHKDKVDTMLGFTRKGDYPRYQALLAGWGTSMDAEFDTWLEQLKSAKK
>Mature_304_residues
MQNYKSEKASMKNKHILPTLAALSLLPASSYAAEVASLESVLSQNHACSDTIVIRSQALTEKQLSSACQLLIKQEASFHK
LFGTLNKPVADDNNHKMRANVYHSRQDYVDHVTNHFDVPSDNGGMYLEGLPWESDNQAEFVAYEKKGQVWNLAHEYVHYL
DGRFNLYGDFCLSLHDSHSGPEYCPKPAPLYPHTVWWSEGVAEYISLGDNNPKAIALIGGEPSYKLSEIFNTSYEKNGGT
DRVYRWGYLAVRFMIENHKDKVDTMLGFTRKGDYPRYQALLAGWGTSMDAEFDTWLEQLKSAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PKD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013510
- InterPro:   IPR002169
- InterPro:   IPR013661
- InterPro:   IPR022409
- InterPro:   IPR000601 [H]

Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD [H]

EC number: =3.4.24.3 [H]

Molecular weight: Translated: 34416; Mature: 34416

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNYKSEKASMKNKHILPTLAALSLLPASSYAAEVASLESVLSQNHACSDTIVIRSQALT
CCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH
EKQLSSACQLLIKQEASFHKLFGTLNKPVADDNNHKMRANVYHSRQDYVDHVTNHFDVPS
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCC
DNGGMYLEGLPWESDNQAEFVAYEKKGQVWNLAHEYVHYLDGRFNLYGDFCLSLHDSHSG
CCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
PEYCPKPAPLYPHTVWWSEGVAEYISLGDNNPKAIALIGGEPSYKLSEIFNTSYEKNGGT
CCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCC
DRVYRWGYLAVRFMIENHKDKVDTMLGFTRKGDYPRYQALLAGWGTSMDAEFDTWLEQLK
CCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
SAKK
HCCC
>Mature Secondary Structure
MQNYKSEKASMKNKHILPTLAALSLLPASSYAAEVASLESVLSQNHACSDTIVIRSQALT
CCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH
EKQLSSACQLLIKQEASFHKLFGTLNKPVADDNNHKMRANVYHSRQDYVDHVTNHFDVPS
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCC
DNGGMYLEGLPWESDNQAEFVAYEKKGQVWNLAHEYVHYLDGRFNLYGDFCLSLHDSHSG
CCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
PEYCPKPAPLYPHTVWWSEGVAEYISLGDNNPKAIALIGGEPSYKLSEIFNTSYEKNGGT
CCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCC
DRVYRWGYLAVRFMIENHKDKVDTMLGFTRKGDYPRYQALLAGWGTSMDAEFDTWLEQLK
CCEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
SAKK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1311172 [H]