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The map label for this gene is rdgC [H]

Identifier: 157962789

GI number: 157962789

Start: 3638676

End: 3639587

Strand: Direct

Name: rdgC [H]

Synonym: Spea_2971

Alternate gene names: 157962789

Gene position: 3638676-3639587 (Clockwise)

Preceding gene: 157962784

Following gene: 157962791

Centisome position: 70.32

GC content: 44.3

Gene sequence:

>912_bases
ATGTGGTTTAAAAATCTAACTGTATACCGCTTTAACAAGCCTTTCTCTGTTGACCCTGATTCACTAGAAAAATCACTGGA
AGACTTCACTTTCTCTCCTTGCTCAAGCCAAGACATCAGCAAATTTGGATTCTCTAAGGCGATGGGTAAGCATGGCGAAA
CCCTGATCCACACAGCCGGTGACAGACACCTTATCTGTGCAACTAAAGAAGAAAAGATTCTACCGTCTCAAGTGATCAAA
GAAGCACTTGAAGAGAAAGTCAGCCAAATTGAAGCTGAAGAAAACCGTAAGCTCGCTAAGAAAGAAAAAGATGCGATGAA
AGATGAGATCACTACGACCTTGTTACCGCGTGCTTTCTCTCGTCGTAGCCAAATTCGTGCACTGATTCTACCTGAGATCC
AAATGGTGCTCGTTGACAGCTCTAGCGCAGCTAAATCTGAAGAGCTAATGGCATTATTGCGTAAAGCAATTGGCACCTTA
CCTATCATTCCGATGAGTTTTAAAACGCCAATTGAAACTCAGCTGACTGAGTGGCTAAAAGAAGGTAAAACACCTGCTGC
GTTTGAAATGCAAGATGAAGCCGAGCTAAAGAGTGACTCTGATGAAGGCGGTATCGTTCGCTTCAAGCAGCAAGACTTGA
GTGAAAATGAAGTACTAGCGCATATCGAAGTGGGTAAACAAGTTCATAAGCTTGCGCTTCACTTCGGTCAGTCGATTGCA
TTCCTACTGCAATCAGATGCCGCGATTAAGCGTCTTAAGTTCTCTGAAGAATTTAGAGCGGGCAACGATGACTTAGGTAA
TGATGACCCAATGGCAAGACTTGACGCAGACTTTGCCTTGATGAGCAGCGAGCTTATCGCATTGATCAATGCAACGGTAG
AGGCTCTTGGCGGCCTAGAAGACAGCATCTAA

Upstream 100 bases:

>100_bases
GAAATGTCACATAGCCATGATTCAAGATGACAATGAGGCGGTTTACCCGAACCGGACAATGGCTTACACTGCGGCTTTAA
TTTTGATTGAGCACTTATCT

Downstream 100 bases:

>100_bases
TTAACTGCATGTGTTAATAAAAAGGCGCCTAATGGCGCCTTTTTGCTCTCCCAGCCAATTTATTTGACCGCTTTTAGCTG
ACCTTGTTTATCAAACGGCC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MWFKNLTVYRFNKPFSVDPDSLEKSLEDFTFSPCSSQDISKFGFSKAMGKHGETLIHTAGDRHLICATKEEKILPSQVIK
EALEEKVSQIEAEENRKLAKKEKDAMKDEITTTLLPRAFSRRSQIRALILPEIQMVLVDSSSAAKSEELMALLRKAIGTL
PIIPMSFKTPIETQLTEWLKEGKTPAAFEMQDEAELKSDSDEGGIVRFKQQDLSENEVLAHIEVGKQVHKLALHFGQSIA
FLLQSDAAIKRLKFSEEFRAGNDDLGNDDPMARLDADFALMSSELIALINATVEALGGLEDSI

Sequences:

>Translated_303_residues
MWFKNLTVYRFNKPFSVDPDSLEKSLEDFTFSPCSSQDISKFGFSKAMGKHGETLIHTAGDRHLICATKEEKILPSQVIK
EALEEKVSQIEAEENRKLAKKEKDAMKDEITTTLLPRAFSRRSQIRALILPEIQMVLVDSSSAAKSEELMALLRKAIGTL
PIIPMSFKTPIETQLTEWLKEGKTPAAFEMQDEAELKSDSDEGGIVRFKQQDLSENEVLAHIEVGKQVHKLALHFGQSIA
FLLQSDAAIKRLKFSEEFRAGNDDLGNDDPMARLDADFALMSSELIALINATVEALGGLEDSI
>Mature_303_residues
MWFKNLTVYRFNKPFSVDPDSLEKSLEDFTFSPCSSQDISKFGFSKAMGKHGETLIHTAGDRHLICATKEEKILPSQVIK
EALEEKVSQIEAEENRKLAKKEKDAMKDEITTTLLPRAFSRRSQIRALILPEIQMVLVDSSSAAKSEELMALLRKAIGTL
PIIPMSFKTPIETQLTEWLKEGKTPAAFEMQDEAELKSDSDEGGIVRFKQQDLSENEVLAHIEVGKQVHKLALHFGQSIA
FLLQSDAAIKRLKFSEEFRAGNDDLGNDDPMARLDADFALMSSELIALINATVEALGGLEDSI

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=298, Percent_Identity=49.6644295302013, Blast_Score=309, Evalue=1e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33817; Mature: 33817

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLTVYRFNKPFSVDPDSLEKSLEDFTFSPCSSQDISKFGFSKAMGKHGETLIHTAG
CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
DRHLICATKEEKILPSQVIKEALEEKVSQIEAEENRKLAKKEKDAMKDEITTTLLPRAFS
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSQIRALILPEIQMVLVDSSSAAKSEELMALLRKAIGTLPIIPMSFKTPIETQLTEWLK
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
EGKTPAAFEMQDEAELKSDSDEGGIVRFKQQDLSENEVLAHIEVGKQVHKLALHFGQSIA
CCCCCCEEECCHHHHHCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
FLLQSDAAIKRLKFSEEFRAGNDDLGNDDPMARLDADFALMSSELIALINATVEALGGLE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DSI
CCC
>Mature Secondary Structure
MWFKNLTVYRFNKPFSVDPDSLEKSLEDFTFSPCSSQDISKFGFSKAMGKHGETLIHTAG
CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
DRHLICATKEEKILPSQVIKEALEEKVSQIEAEENRKLAKKEKDAMKDEITTTLLPRAFS
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSQIRALILPEIQMVLVDSSSAAKSEELMALLRKAIGTLPIIPMSFKTPIETQLTEWLK
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
EGKTPAAFEMQDEAELKSDSDEGGIVRFKQQDLSENEVLAHIEVGKQVHKLALHFGQSIA
CCCCCCEEECCHHHHHCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
FLLQSDAAIKRLKFSEEFRAGNDDLGNDDPMARLDADFALMSSELIALINATVEALGGLE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DSI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA