| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962764
Identifier: 157962764
GI number: 157962764
Start: 3606579
End: 3607121
Strand: Direct
Name: 157962764
Synonym: Spea_2946
Alternate gene names: NA
Gene position: 3606579-3607121 (Clockwise)
Preceding gene: 157962763
Following gene: 157962767
Centisome position: 69.7
GC content: 46.22
Gene sequence:
>543_bases ATGAGTCACTCAATGCGCCTGTTAAAATCCACTATTCATGCCGATATCGCTCACCTAACCGCAGATGAGCTTAAGGCAAA GAGTTTTCACCGCCAAGCTGCTCGCGGCATTATTTTAAAGGGTGAAGAGATCTTAATGCTCTATACCGAGCGCTATCATG ATTACAGTATTCCAGGTGGTGGCGTCGATGAAGGCGAAGATATTTGCAGTGGCCTCATTCGTGAATTAGAAGAAGAGACT GGCGCGCAGCATATCGAGATCATCAGTGAGTTTGGCCGCTACGAAGAGTTTCGTCCTTGGTATAAAGACGATTTTGATGT GGTTCACATGGAGTCGTTCTGCTTTGTCTGCGATATTCATCCAGAGCTTGGCGAAACCAAGTTAGAAGCCCATGAGATCC AAAACGGCATGACCCCAGTTTGGATCAATATTCATCAAGCCATCGCCCACAACGAACACACTATGGCCAACAGCCCTAAG AAAGGCATGTCGATTGAGCGAGAAACTTTTCTGCTAAAGCGTATCGTGGCTGAGCTTTTATAA
Upstream 100 bases:
>100_bases ACTGTTATCGCTGATTATCAGGCGTTAAGCCCGTACACTAGCATTTAGGTAATGCTTACCGATACTAAGCTGTAGGCTTC AACTTTCAATATACCAATTT
Downstream 100 bases:
>100_bases CCGACAAAACCTCATAGCTAAACTGTAATTGCTAGGCCCCAAAAGCGTGAACCGATCCGAATACAACTGCAATAACTCAG TTGTAGTATCCCTGTCGTAA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Protein; Phosphohydrolase; NTP Pyrophosphohydrolase; NUDIX Hydrolase Superfamily Protein; MutT/NUDIX Protein; Nudix Hydrolase
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSHSMRLLKSTIHADIAHLTADELKAKSFHRQAARGIILKGEEILMLYTERYHDYSIPGGGVDEGEDICSGLIRELEEET GAQHIEIISEFGRYEEFRPWYKDDFDVVHMESFCFVCDIHPELGETKLEAHEIQNGMTPVWINIHQAIAHNEHTMANSPK KGMSIERETFLLKRIVAELL
Sequences:
>Translated_180_residues MSHSMRLLKSTIHADIAHLTADELKAKSFHRQAARGIILKGEEILMLYTERYHDYSIPGGGVDEGEDICSGLIRELEEET GAQHIEIISEFGRYEEFRPWYKDDFDVVHMESFCFVCDIHPELGETKLEAHEIQNGMTPVWINIHQAIAHNEHTMANSPK KGMSIERETFLLKRIVAELL >Mature_179_residues SHSMRLLKSTIHADIAHLTADELKAKSFHRQAARGIILKGEEILMLYTERYHDYSIPGGGVDEGEDICSGLIRELEEETG AQHIEIISEFGRYEEFRPWYKDDFDVVHMESFCFVCDIHPELGETKLEAHEIQNGMTPVWINIHQAIAHNEHTMANSPKK GMSIERETFLLKRIVAELL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20676; Mature: 20545
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSMRLLKSTIHADIAHLTADELKAKSFHRQAARGIILKGEEILMLYTERYHDYSIPGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEEHHCCCCCCCCC GVDEGEDICSGLIRELEEETGAQHIEIISEFGRYEEFRPWYKDDFDVVHMESFCFVCDIH CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCEEEEEECC PELGETKLEAHEIQNGMTPVWINIHQAIAHNEHTMANSPKKGMSIERETFLLKRIVAELL CCCCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure SHSMRLLKSTIHADIAHLTADELKAKSFHRQAARGIILKGEEILMLYTERYHDYSIPGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEEHHCCCCCCCCC GVDEGEDICSGLIRELEEETGAQHIEIISEFGRYEEFRPWYKDDFDVVHMESFCFVCDIH CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCEEEEEECC PELGETKLEAHEIQNGMTPVWINIHQAIAHNEHTMANSPKKGMSIERETFLLKRIVAELL CCCCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA